Xiaobo Zhou

41 papers Journal 39Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Time-aware attention-based deep representation learning for multi-source longitudinal data with structured missingness in electronic medical records.
Inf. Fusion
Jiawei Luo, Liren Yang, Xixi Nie, Lan Lan, Shixin Huang, Xiaoyu Wan, Xiaobo Zhou
2025 J jnl
AllergenAI: a deep learning model predicting allergenicity based on protein sequence.
BMC Bioinform.
Jiajia Liu, Surendra S. Negi, Chengyuan Yang, Xiaobo Zhou, Catherine H. Schein, Werner Braun, Pora Kim
2025 J jnl
Cross-dataset EEG emotion recognition based on pre-trained Vision Transformer considering emotional sensitivity diversity.
Expert Syst. Appl.
Fang Wang, Yu-Chu Tian, Xiaobo Zhou
2025 J jnl
EMR-LIP: A lightweight framework for standardizing the preprocessing of longitudinal irregular data in electronic medical records.
Comput. Methods Programs Biomed.
Jiawei Luo, Shixin Huang, Lan Lan, Shu Yang, Tingqian Cao, Jin Yin, Jiajun Qiu, Xiaoyan Yang, Yingqiang Guo, Xiaobo Zhou
2025 J jnl
Review of diffusion models and its applications in biomedical informatics.
BMC Medical Informatics Decis. Mak.
Jiawei Luo, Liren Yang, Yan Liu, Changbao Hu, Grant Wang, Yan Yang, Tie-Lin Yang, Xiaobo Zhou
2025 J jnl
Unleashing the power of computational insights in revealing the complexity of biological systems in the new era of spatial multi-omics.
CoRR
Zhiwei Fan, Tiangang Wang, Kexin Huang, Binwu Ying, Xiaobo Zhou
2024 — conf
Attention-Fusion Model for Multi-omics (AMMO) Data Integration in Lung Adenocarcinoma.
CMMCA@MICCAI
Wentao Li, Amgad Muneer, Muhammad Waqas, Xiaobo Zhou, Jia Wu
2024 J jnl
Cross-Image siamese graph convolutional network for Fine-Grained image retrieval in diabetic retinopathy.
Biomed. Signal Process. Control.
Fang Chen, Weiling Zhao, Xiaobo Zhou
2024 J jnl
Large language models in bioinformatics: applications and perspectives.
CoRR
Jiajia Liu, Mengyuan Yang, Yankai Yu, Haixia Xu, Kang Li, Xiaobo Zhou
2024 J jnl
Revealing chronic disease progression patterns using Gaussian process for stage inference.
J. Am. Medical Informatics Assoc.
Yanfei Wang, Weiling Zhao, Angela Ross, Lei You, Hongyu Wang, Xiaobo Zhou
2024 J jnl
SeRL: Style-embedding representation learning for unsupervised CT images synthesis from unpaired MR images.
Biomed. Signal Process. Control.
Lei You, Hongyu Wang, Eduardo J. Matta, Venkateswar Surabhi, Xiaobo Zhou
2023 — conf
A Novel Data Augmentation Method for Robotic Surgical Instrument Small Part Segmentation in Complex Scenes.
MLMI
Dewei Yang, Yongjian Li, Xin Wang, Jie Liu, Xiaobo Zhou
2023 J jnl
AgeAnno: a knowledgebase of single-cell annotation of aging in human.
Nucleic Acids Res.
Kexin Huang, Haoran Gong, Jingjing Guan, Lingxiao Zhang, Changbao Hu, Weiling Zhao, Liyu Huang, Wei Zhang, Pora Kim, Xiaobo Zhou
2023 J jnl
Automated CT pancreas segmentation for acute pancreatitis patients by combining a novel object detection approach and U-Net.
Biomed. Signal Process. Control.
Yang Deng, Lan Lan, Lei You, Kai Chen, Li Peng, Weiling Zhao, Bin Song, Yi Wang, Zhiwei Ji, Xiaobo Zhou
2023 J jnl
Deep Learning Technologies for Time Series Anomaly Detection in Healthcare: A Review.
IEEE Access
Xue Yang, Xuejun Qi, Xiaobo Zhou
2023 J jnl
Genetic control of RNA editing in neurodegenerative disease.
Briefings Bioinform.
Sijia Wu, Qiuping Xue, Mengyuan Yang, Yanfei Wang, Pora Kim, Xiaobo Zhou, Liyu Huang
2023 J jnl
Inferring evolutionary trajectories from cross-sectional transcriptomic data to mirror lung adenocarcinoma progression.
PLoS Comput. Biol.
Kexin Huang, Yun Zhang, Haoran Gong, Zhengzheng Qiao, Tiangang Wang, Weiling Zhao, Liyu Huang, Xiaobo Zhou
2023 J jnl
Integrated mRNA sequence optimization using deep learning.
Briefings Bioinform.
Haoran Gong, Jianguo Wen, Ruihan Luo, Yuzhou Feng, Jingjing Guo, Hongguang Fu, Xiaobo Zhou
2023 J jnl
Real-time prediction of organ failures in patients with acute pancreatitis using longitudinal irregular data.
J. Biomed. Informatics
Jiawei Luo, Lan Lan, Shixin Huang, Xiaoxi Zeng, Qu Xiang, Mengjiao Li, Shu Yang, Weiling Zhao, Xiaobo Zhou
2023 J jnl
SPASCER: spatial transcriptomics annotation at single-cell resolution.
Nucleic Acids Res.
Zhiwei Fan, Yangyang Luo, Huifen Lu, Tiangang Wang, Yuzhou Feng, Weiling Zhao, Pora Kim, Xiaobo Zhou
2023 J jnl
The Integrative Studies on the Functional A-to-I RNA Editing Events in Human Cancers.
Genom. Proteom. Bioinform.
Sijia Wu, Zhiwei Fan, Pora Kim, Liyu Huang, Xiaobo Zhou
2022 J jnl
A novel sagittal craniosynostosis classification system based on multi-view learning algorithm.
Neural Comput. Appl.
Lei You, Yang Deng, Guangming Zhang, Yanfei Wang, Griffin Patrick Bins, Christopher Michael Runyan, Lisa David, Xiaobo Zhou
2022 J jnl
FusionGDB 2.0: fusion gene annotation updates aided by deep learning.
Nucleic Acids Res.
Pora Kim, Hua Tan, Jiajia Liu, Haeseung Lee, Hyesoo Jung, Himanshu Kumar, Xiaobo Zhou
2022 J jnl
Identification of non-small-cell lung cancer subtypes by unsupervised clustering of CT image features with distinct prognoses and gene pathway activities.
Biomed. Signal Process. Control.
Kexin Huang, Lifeng Yang, Yubo Wang, Liyu Huang, Xiaobo Zhou, Wei Zhang
2022 J jnl
lncRNAfunc: a knowledgebase of lncRNA function in human cancer.
Nucleic Acids Res.
Mengyuan Yang, Huifen Lu, Jiajia Liu, Sijia Wu, Pora Kim, Xiaobo Zhou
2021 J jnl
A Coarse-to-Fine Framework for Automated Knee Bone and Cartilage Segmentation Data from the Osteoarthritis Initiative.
J. Digit. Imaging
Yang Deng, Lei You, Yanfei Wang, Xiaobo Zhou
2021 J jnl
ADeditome provides the genomic landscape of A-to-I RNA editing in Alzheimer's disease.
Briefings Bioinform.
Sijia Wu, Mengyuan Yang, Pora Kim, Xiaobo Zhou
2021 J jnl
Corrections to "A multiscale Agent-Based Model of Ductal Carcinoma in Situ".
IEEE Trans. Biomed. Eng.
Joseph D. Butner, David Fuentes, Bulent Ozpolat, George A. Calin, Xiaobo Zhou, John S. Lowengrub, Vittorio Cristini, Zhihui Wang
2021 J jnl
Early Prediction of Organ Failures in Patients with Acute Pancreatitis Using Text Mining.
Sci. Program.
Jiawei Luo, Lan Lan, Dujiang Yang, Shixin Huang, Mengjiao Li, Jin Yin, Juan Xiao, Xiaobo Zhou
2021 J jnl
ExonSkipAD provides the functional genomic landscape of exon skipping events in Alzheimer's disease.
Briefings Bioinform.
Mengyuan Yang, Ke Yiya, Pora Kim, Xiaobo Zhou
2021 J jnl
miRactDB characterizes miRNA-gene relation switch between normal and cancer tissues across pan-cancer.
Briefings Bioinform.
Hua Tan, Pora Kim, Peiqing Sun, Xiaobo Zhou
2020 J jnl
A Multiscale Agent-Based Model of Ductal Carcinoma In Situ.
IEEE Trans. Biomed. Eng.
Joseph D. Butner, David Fuentes, Bulent Ozpolat, George A. Calin, Xiaobo Zhou, John S. Lowengrub, Vittorio Cristini, Zhihui Wang
2020 J jnl
Association between Timing of Surgical Intervention and Mortality in 15, 813 Acute Pancreatitis.
Comput. Math. Methods Medicine
Lan Lan, Jiawei Luo, Xiaoyan Yang, Dujiang Yang, Mengjiao Li, Fangwei Chen, Nianyin Zeng, Xiaobo Zhou
2020 J jnl
ExonSkipDB: functional annotation of exon skipping event in human.
Nucleic Acids Res.
Pora Kim, Mengyuan Yang, Ke Yiya, Weiling Zhao, Xiaobo Zhou
2020 J jnl
FGviewer: an online visualization tool for functional features of human fusion genes.
Nucleic Acids Res.
Pora Kim, Ke Yiya, Xiaobo Zhou
2020 J jnl
PredictFP2: A New Computational Model to Predict Fusion Peptide Domain in All Retroviruses.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sijia Wu, Xiaoming Wu, Jie Tian, Xiaobo Zhou, Liyu Huang
2020 J jnl
Predicting Timing of Surgical Intervention Using Recurrent Neural Network for Necrotizing Pancreatitis.
IEEE Access
Jiawei Luo, Lan Lan, Li Peng, Mengjiao Li, Huimin Lu, Dujiang Yang, Xiaoyan Yang, Xiaobo Zhou
2019 J jnl
A Framework for Big Data Governance to Advance RHINs: A Case Study of China.
IEEE Access
Quan Li, Lan Lan, Nianyin Zeng, Lei You, Jin Yin, Xiaobo Zhou, Qun Meng
2019 J jnl
FusionGDB: fusion gene annotation DataBase.
Nucleic Acids Res.
Pora Kim, Xiaobo Zhou
2019 J jnl
Risk Prediction Model for Knee Arthroplasty.
IEEE Access
Guangming Zhang, Lei You, Lan Lan, Nianyin Zeng, Wei Chen, Gary G. Poehling, Xiaobo Zhou
2019 J jnl
Systematically understanding the immunity leading to CRPC progression.
PLoS Comput. Biol.
Zhiwei Ji, Weiling Zhao, Hui-Kuan Lin, Xiaobo Zhou