Xiangtian Yu

16 papers Journal 12Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
IEEE Trans. Netw. Serv. Manag.
Junwei Zhou, Yuyang Gao, Ying Zhu, Xiangtian Yu, Yanchao Yang, Cheng Tan, Jianwen Xiang
2022 J jnl
Bioinform.
Tao Sun, Mengci Li, Xiangtian Yu, Dandan Liang, Guoxiang Xie, Chao Sang, Wei Jia, Tianlu Chen
2022 J jnl
Briefings Bioinform.
Hui Tang, Xiangtian Yu, Rui Liu, Tao Zeng
2021 J jnl
PLoS Comput. Biol.
Weifeng Guo, Xiangtian Yu, Qianqian Shi, Jing Liang, Shao-Wu Zhang, Tao Zeng
2020 J jnl
IEEE ACM Trans. Comput. Biol. Bioinform.
Jingsong Zhang, Jianmei Guo, Ming Zhang, Xiangtian Yu, Xiaoqing Yu, Weifeng Guo, Tao Zeng, Luonan Chen
2020 J jnl
IEEE Access
Xiangtian Yu, Zijun Gan, Yan Xu, Sibao Wan, Min Li, Shijian Ding, Tao Zeng
2019 J jnl
BMC Bioinform.
Shaoyan Sun, Xiangtian Yu, Fengnan Sun, Ying Tang, Juan Zhao, Tao Zeng
2018 conf
ICIC (1)
Shaoyan Sun, Xiangtian Yu, Fengnan Sun, Ying Tang, Juan Zhao, Tao Zeng
2017 conf
ISBRA
Jingsong Zhang, Jianmei Guo, Xiaoqing Yu, Xiangtian Yu, Weifeng Guo, Tao Zeng, Luonan Chen
2017 J jnl
Bioinform.
Qianqian Shi, Chuanchao Zhang, Minrui Peng, Xiangtian Yu, Tao Zeng, Juan Liu, Luonan Chen
2017 J jnl
PLoS Comput. Biol.
Xiaoping Liu, Xiao Chang, Rui Liu, Xiangtian Yu, Luonan Chen, Kazuyuki Aihara
2016 J jnl
Briefings Bioinform.
Tao Zeng, Wanwei Zhang, Xiangtian Yu, Xiaoping Liu, Meiyi Li, Luonan Chen
2016 conf
BIBM
Chuanchao Zhang, Juan Liu, Qianqian Shi, Xiangtian Yu, Tao Zeng, Luonan Chen
2014 J jnl
Bioinform.
Rui Liu, Xiangtian Yu, Xiaoping Liu, Dong Xu, Kazuyuki Aihara, Luonan Chen
2014 J jnl
Bioinform.
Xiangtian Yu, Guojun Li, Luonan Chen
2010 conf
BIC-TA
Yusen Zhang, Xiangtian Yu
redb/extractors/decompiler/_archive/ghidra-test.py
← Index redb/extractors/decompiler/_archive/ghidra-test.py python
import subprocess
import json
import os
import tempfile
import uuid
import shutil
import sys
import time


def run_command(cmd, env=None):
    try:
        print(f"Starting command: {' '.join(cmd)}")
        start_time = time.time()
        process = subprocess.Popen(
            cmd, env=env, stdout=subprocess.PIPE, stderr=subprocess.PIPE, text=True
        )

        while True:
            output = process.stdout.readline()
            if output:
                print(output.strip())
            if process.poll() is not None:
                break

        stdout, stderr = process.communicate()
        end_time = time.time()

        print(f"Command finished. Execution time: {end_time - start_time:.2f} seconds")
        print(f"Return code: {process.returncode}")

        if process.returncode != 0:
            print(f"Error output:\n{stderr}")
            return None
        return stdout
    except Exception as e:
        print(f"Error running command {' '.join(cmd)}: {e}")
        return None


def analyze_binary(ghidra_path, binary_path, java_script_path):
    print(f"Ghidra path: {ghidra_path}")
    print(f"Binary path: {binary_path}")
    print(f"Java script path: {java_script_path}")

    # Check if Java script exists
    if not os.path.exists(java_script_path):
        print(f"Error: Java script not found at {java_script_path}")
        return None

    # Set up environment variables
    env = os.environ.copy()
    java_home = "/usr/lib/jvm/java-17-openjdk-amd64"  # Adjust this path if needed
    env["JAVA_HOME"] = java_home
    env["PATH"] = f"{java_home}/bin:{env['PATH']}"
    env["LD_LIBRARY_PATH"] = f"{java_home}/lib:{env.get('LD_LIBRARY_PATH', '')}"

    # Print environment variables for debugging
    print(f"JAVA_HOME: {env['JAVA_HOME']}")
    print(f"PATH: {env['PATH']}")
    print(f"LD_LIBRARY_PATH: {env['LD_LIBRARY_PATH']}")

    # Check Ghidra installation
    analyzeHeadless_path = f"{ghidra_path}/support/analyzeHeadless"
    print(f"analyzeHeadless exists: {os.path.exists(analyzeHeadless_path)}")

    print(f"Binary file exists: {os.path.exists(binary_path)}")

    # Check Java
    java_version = run_command(["java", "-version"], env=env)
    print(f"Java version: {java_version}")

    # Create a temporary project directory
    project_path = tempfile.gettempdir() + "/ghidra_" + str(uuid.uuid4())
    os.makedirs(project_path, exist_ok=True)
    print(f"Created temporary project path: {project_path}")
    output_file = ""

    try:
        # Run Ghidra's headless analyzer
        analyze_cmd = [
            analyzeHeadless_path,
            project_path,
            "TempProject",
            "-import",
            binary_path,
            "-postScript",
            java_script_path,
            "-deleteProject",
        ]

        result = run_command(analyze_cmd, env=env)
        if result is None:
            return None

        # Read the output JSON file
        output_file = "ghidra_output.json"
        if os.path.exists(output_file):
            with open(output_file, "r") as f:
                functions = json.load(f)
            return functions
        else:
            print(
                f"Output file {output_file} not found. Ghidra analysis may have failed."
            )
            # List files in the current directory
            print("Files in the current directory:")
            print("\n".join(os.listdir(".")))
            return None
    finally:
        # Clean up
        if os.path.exists(output_file):
            os.remove(output_file)
        if os.path.exists(project_path):
            shutil.rmtree(project_path)


# Example usage
if __name__ == "__main__":
    # if len(sys.argv) != 4:
    #     print("Usage: python script.py <ghidra_path> <binary_path> <java_script_path>")
    #     sys.exit(1)

    # ghidra_path = sys.argv[1]
    # binary_path = sys.argv[2]
    # java_script_path = sys.argv[3]

    ghidra_path = "/opt/ghidra"
    binary_path = "/home/p4c0/dev/redb/test_files/hello"
    java_script_path = (
        "/opt/ghidra/Ghidra/Features/Base/ghidra_scripts/GhidraDecompilerScript.java"
    )

    functions = analyze_binary(ghidra_path, binary_path, java_script_path)

    if functions:
        print(f"Extracted functions from {binary_path}:")
        for func in functions:
            print(f"\nFunction: {func['name']}")
            print(f"Address: {func['address']}")
            print(f"Decompiled code:\n{func['decompiled']}")
    else:
        print("Failed to extract functions.")