Xavier Didelot

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
Bayesian Inference of Pathogen Phylogeography using the Structured Coalescent Model.
PLoS Comput. Biol.
Ian Roberts, Richard G. Everitt, Jere Koskela, Xavier Didelot
2024 J jnl
RecGraph: recombination-aware alignment of sequences to variation graphs.
Bioinform.
Jorge Avila Cartes, Paola Bonizzoni, Simone Ciccolella, Gianluca Della Vedova, Luca Denti, Xavier Didelot, Davide Cesare Monti, Yuri Pirola
2023 J jnl
Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease.
Bioinform.
Xavier Didelot, David Helekal, Michelle Kendall, Paolo Ribeca
2022 J jnl
SARS-CoV-2 transmissibility compared between variants of concern and vaccination status.
Briefings Bioinform.
Liang Wang, Xavier Didelot, Yuhai Bi, George F. Gao
2019 J jnl
A dynamic power-law sexual network model of gonorrhoea outbreaks.
PLoS Comput. Biol.
Lilith K. Whittles, Peter J. White, Xavier Didelot
2018 J jnl
A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination.
PLoS Comput. Biol.
Caitlin Collins, Xavier Didelot
2018 J jnl
outbreaker2: a modular platform for outbreak reconstruction.
BMC Bioinform.
Finlay Campbell, Xavier Didelot, Richard G. FitzJohn, Neil M. Ferguson, Anne Cori, Thibaut Jombart
2017 J jnl
Simultaneous inference of phylogenetic and transmission trees in infectious disease outbreaks.
PLoS Comput. Biol.
Don Klinkenberg, Jantien A. Backer, Xavier Didelot, Caroline Colijn, Jacco Wallinga
2015 J jnl
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes.
PLoS Comput. Biol.
Xavier Didelot, Daniel J. Wilson
2014 J jnl
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data.
PLoS Comput. Biol.
Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson
2009 J jnl
SimMLST: simulation of multi-locus sequence typing data under a neutral model.
Bioinform.
Xavier Didelot, Daniel J. Lawson, Daniel Falush
2025 Best paper conf
Assessing the Effectiveness of the Tigress Obfuscator Against MOPSA and BinaryNinja.
CheckMATE
Nicolò Altamura, Enrico Bragastini, Marco Campion, Mila Dalla Preda
2026 Best paper preprint
ASSEMBLAGE-DEEPHISTORY: A Cross-Build Binary Dataset with Temporal Coverage.
arXiv
Chang Liu, Noah Fleischmann, Nicolò Altamura, Edward Raff, James Holt, Kristopher Micinski