Wiro J. Niessen

378 papers A* 3A 9B 34Misc 1Journal 184Unranked 143
YearRankTypeTitle / Venue / Authors
2026 J jnl
The 4D Human Embryonic Brain Atlas: Spatiotemporal atlas generation for rapid anatomical changes.
Comput. Medical Imaging Graph.
Wietske A. P. Bastiaansen, Melek Rousian, Anton H. J. Koning, Wiro J. Niessen, Bernadette S. De Bakker, Régine P. M. Steegers-Theunissen, Stefan Klein
2025 J jnl
Evaluating Open-Weight Large Language Models for Structured Data Extraction from Narrative Medical Reports Across Multiple Use Cases and Languages.
CoRR
Douwe J. Spaanderman, Karthik Prathaban, Petr Zelina, Kaouther Mouheb, Lukás Hejtmánek, Matthew Marzetti, Antonius W. Schurink, Damian Chan, Ruben Niemantsverdriet, Frederik Hartmann, Zhen Qian, Maarten G. Thomeer, Petr Holub, Farhan Akram, Frank J. Wolters, Meike W. Vernooij, Cornelis Verhoef, Esther E. Bron, Vít Novácek, Dirk J. Grünhagen, Wiro J. Niessen, Martijn P. A. Starmans, Stefan Klein
2025 J jnl
The 4D Human Embryonic Brain Atlas: spatiotemporal atlas generation for rapid anatomical changes using first-trimester ultrasound from the Rotterdam Periconceptional Cohort.
CoRR
Wietske A. P. Bastiaansen, Melek Rousian, Anton H. J. Koning, Wiro J. Niessen, Bernadette de Bakker, Régine P. M. Steegers-Theunissen, Stefan Klein
2024 J jnl
AI in radiological imaging of soft-tissue and bone tumours: a systematic review evaluating against CLAIM and FUTURE-AI guidelines.
CoRR
Douwe J. Spaanderman, Matthew Marzetti, Xinyi Wan, Andrew F. Scarsbrook, Philip Robinson, Edwin H. G. Oei, Jacob J. Visser, Robert Hemke, Kirsten van Langevelde, David F. Hanff, Geert J. L. H. van Leenders, Cornelis Verhoef, Dirk J. Gruühagen, Wiro J. Niessen, Stefan Klein, Martijn P. A. Starmans
2024 J jnl
An automated framework for brain vessel centerline extraction from CTA images.
CoRR
Sijie Liu, Ruisheng Su, Jianghang Su, Jingmin Xin, Jiayi Wu, Wim H. van Zwam, Pieter Jan van Doormaal, Aad van der Lugt, Wiro J. Niessen, Nanning Zheng, Theo van Walsum
2024 J jnl
CAVE: Cerebral artery-vein segmentation in digital subtraction angiography.
Comput. Medical Imaging Graph.
Ruisheng Su, Matthijs van der Sluijs, Yuan Chen, Sandra A. P. Cornelissen, Ruben van den Broek, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum
2024 J jnl
Designing interpretable deep learning applications for functional genomics: a quantitative analysis.
Briefings Bioinform.
Arno van Hilten, Sonja Katz, Edoardo Saccenti, Wiro J. Niessen, Gennady V. Roshchupkin
2024 J jnl
Minimally Interactive Segmentation of Soft-Tissue Tumors on CT and MRI using Deep Learning.
CoRR
Douwe J. Spaanderman, Martijn P. A. Starmans, Gonnie C. M. van Erp, David F. Hanff, Judith H. Sluijter, Anne-Rose W. Schut, Geert J. L. H. van Leenders, Cornelis Verhoef, Dirk J. Grünhagen, Wiro J. Niessen, Jacob J. Visser, Stefan Klein
2023 — conf
AngioMoCo: Learning-Based Motion Correction in Cerebral Digital Subtraction Angiography.
MICCAI (7)
Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum, Adrian V. Dalca
2023 J jnl
AngioMoCo: Learning-based Motion Correction in Cerebral Digital Subtraction Angiography.
CoRR
Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum, Adrian V. Dalca
2023 J jnl
Deep reinforcement learning for cerebral anterior vessel tree extraction from 3D CTA images.
Medical Image Anal.
Jiahang Su, Shuai Li, Lennard Wolff, Wim H. van Zwam, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum
2023 J jnl
Evaluation of AR visualization approaches for catheter insertion into the ventricle cavity.
IEEE Trans. Vis. Comput. Graph.
Mohamed Benmahdjoub, Abdullah Thabit, Marie-Lise C. van Veelen, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2023 — conf
Fiducial markers detection trained exclusively on synthetic data for image-to-patient alignment in HMD-based surgical navigation.
ISMAR-Adjunct
Mohamed Benmahdjoub, Abdullah Thabit, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2023 J jnl
Multi-view Contour-constrained Transformer Network for Thin-cap Fibroatheroma Identification.
Neurocomputing
Sijie Liu, Jingmin Xin, Jiayi Wu, Yangyang Deng, Ruisheng Su, Wiro J. Niessen, Nanning Zheng, Theo van Walsum
2023 J jnl
Prior-knowledge-informed deep learning for lacune detection and quantification using multi-site brain MRI.
CoRR
Bo Li, Jeroen de Bresser, Wiro J. Niessen, Matthias van Osch, Wiesje M. van der Flier, Geert Jan Biessels, Meike W. Vernooij, Esther Bron
2022 J jnl
Augmented reality navigation for minimally invasive craniosynostosis surgery: a phantom study.
Int. J. Comput. Assist. Radiol. Surg.
Abdullah Thabit, Mohamed Benmahdjoub, Marie-Lise C. van Veelen, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2022 J jnl
Computer-aided diagnosis and prediction in brain disorders.
CoRR
Vikram Venkatraghavan, Sebastian R. van der Voort, Daniel Bos, Marion Smits, Frederik Barkhof, Wiro J. Niessen, Stefan Klein, Esther E. Bron
2022 J jnl
Differential Diagnosis and Molecular Stratification of Gastrointestinal Stromal Tumors on CT Images Using a Radiomics Approach.
J. Digit. Imaging
Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein
2022 — conf
Evaluation of marker tracking using mono and stereo vision in Microsoft HoloLens for surgical navigation.
Image-Guided Procedures
Abdullah Thabit, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2022 J jnl
Multi-Atlas Segmentation and Spatial Alignment of the Human Embryo in First Trimester 3D Ultrasound.
CoRR
Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein
2022 J jnl
Multimodal markers for technology-independent integration of augmented reality devices and surgical navigation systems.
Virtual Real.
Mohamed Benmahdjoub, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2022 J jnl
Spatio-temporal deep learning for automatic detection of intracranial vessel perforation in digital subtraction angiography during endovascular thrombectomy.
Medical Image Anal.
Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Geert J. Lycklama, Jeannette Hofmeijer, Charles B. L. M. Majoie, Pieter Jan van Doormaal, Adriaan C. G. M. van Es, Danny Ruijters, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum
2022 — conf
Towards a 4D Spatio-Temporal Atlas of the Embryonic and Fetal Brain Using a Deep Learning Approach for Groupwise Image Registration.
WBIR
Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein
2021 J jnl
Analyzing the effect of
NeuroImage
Vikram Venkatraghavan, Stefan Klein, Lana Fani, Leontine S. Ham, Henri A. Vrooman, M. Kamran Ikram, Wiro J. Niessen, Esther E. Bron
2021 J jnl
Differences Between MR Brain Region Segmentation Methods: Impact on Single-Subject Analysis.
Frontiers Big Data
Wyke Huizinga, Dirk H. J. Poot, Elisabeth J. Vinke, F. Wenzel, Esther Bron, N. Toussaint, Christian Ledig, Henri A. Vrooman, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Stefan Klein
2021 B conf
Learning unbiased group-wise registration (LUGR) and joint segmentation: evaluation on longitudinal diffusion MRI.
Image Processing
Bo Li, Wiro J. Niessen, Stefan Klein, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron
2021 J jnl
Longitudinal diffusion MRI analysis using Segis-Net: A single-step deep-learning framework for simultaneous segmentation and registration.
NeuroImage
Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron
2021 J jnl
Progression along data-driven disease timelines is predictive of Alzheimer's disease in a population-based cohort.
NeuroImage
Vikram Venkatraghavan, Elisabeth J. Vinke, Esther E. Bron, Wiro J. Niessen, Mohammad Arfan Ikram, Stefan Klein, Meike W. Vernooij
2021 — conf
Projection-Wise Disentangling for Fair and Interpretable Representation Learning: Application to 3D Facial Shape Analysis.
MICCAI (5)
Xianjing Liu, Bo Li, Esther E. Bron, Wiro J. Niessen, Eppo B. Wolvius, Gennady V. Roshchupkin
2021 J jnl
Projection-wise Disentangling for Fair and Interpretable Representation Learning: Application to 3D Facial Shape Analysis.
CoRR
Xianjing Liu, Bo Li, Esther Bron, Wiro J. Niessen, Eppo B. Wolvius, Gennady Roshchupkin
2021 J jnl
Recurrent Inference Machines as inverse problem solvers for MR relaxometry.
CoRR
Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot
2021 J jnl
Recurrent inference machines as inverse problem solvers for MR relaxometry.
Medical Image Anal.
Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot
2021 J jnl
Reproducible radiomics through automated machine learning validated on twelve clinical applications.
CoRR
Martijn P. A. Starmans, Sebastian R. van der Voort, Thomas Phil, Milea J. M. Timbergen, Melissa Vos, Guillaume A. Padmos, Wouter Kessels, David Hanff, Dirk J. Grünhagen, Cornelis Verhoef, Stefan Sleijfer, Martin J. van den Bent, Marion Smits, Roy S. Dwarkasing, Christopher J. Els, Federico Fiduzi, Geert J. L. H. van Leenders, Anela Blazevic, Johannes Hofland, Tessa Brabander, Renza A. H. van Gils, Gaston J. H. Franssen, Richard A. Feelders, Wouter W. de Herder, Florian E. Buisman, François E. J. A. Willemssen, Bas Groot Koerkamp, Lindsay Angus, Astrid A. M. van der Veldt, Ana Rajicic, Arlette E. Odink, Mitchell Deen, Jose M. Castillo T, Jifke F. Veenland, Ivo Schoots, Michel Renckens, Michail Doukas, Rob A. de Man, Jan N. M. IJzermans, Razvan L. Miclea, Peter B. Vermeulen, Esther E. Bron, Maarten G. Thomeer, Jacob J. Visser, Wiro J. Niessen, Stefan Klein
2021 J jnl
Virtual extensions improve perception-based instrument alignment using optical see-through devices.
IEEE Trans. Vis. Comput. Graph.
Mohamed Benmahdjoub, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum
2021 J jnl
autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients.
IEEE Trans. Medical Imaging
Ruisheng Su, Sandra A. P. Cornelissen, Matthijs van der Sluijs, Adriaan C. G. M. van Es, Wim H. van Zwam, Diederik W. J. Dippel, Geert J. Lycklama, Pieter Jan van Doormaal, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum
2020 J jnl
Analyzing the effect of APOE on Alzheimer's disease progression using an event-based model for stratified populations.
CoRR
Vikram Venkatraghavan, Stefan Klein, Lana Fani, Leontine S. Ham, Henri A. Vrooman, M. Kamran Ikram, Wiro J. Niessen, Esther E. Bron
2020 — conf
Atlas-Based Segmentation of the Human Embryo Using Deep Learning with Minimal Supervision.
ASMUS/PIPPI@MICCAI
Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein
2020 J jnl
Automatic Collateral Scoring From 3D CTA Images.
IEEE Trans. Medical Imaging
Jiahang Su, Lennard Wolff, Adriaan C. G. M. van Es, Wim H. van Zwam, Charles B. L. M. Majoie, Diederik W. J. Dippel, Aad van der Lugt, Wiro J. Niessen, Theo van Walsum
2020 J jnl
Changes in the intracranial volume from early adulthood to the sixth decade of life: A longitudinal study.
NeuroImage
Yaron Caspi, Rachel M. Brouwer, Hugo G. Schnack, Marieke E. van de Nieuwenhuijzen, Wiepke Cahn, René S. Kahn, Wiro J. Niessen, Aad van der Lugt, Hilleke E. Hulshoff Pol
2020 — conf
Computer Aided Diagnosis of Clinically Significant Prostate Cancer in Low-Risk Patients on Multi-Parametric MR Images Using Deep Learning.
ISBI
Muhammad Arif, Ivo G. Schoots, Jose M. Castillo T, Monique J. Roobol, Wiro J. Niessen, Jifke F. Veenland
2020 J jnl
Cross-Cohort Generalizability of Deep and Conventional Machine Learning for MRI-based Diagnosis and Prediction of Alzheimer's Disease.
CoRR
Esther E. Bron, Stefan Klein, Janne M. Papma, Lize C. Jiskoot, Vikram Venkatraghavan, Jara Linders, Pauline Aalten, Peter Paul De Deyn, Geert Jan Biessels, Jurgen A. H. R. Claassen, Huub A. M. Middelkoop, Marion Smits, Wiro J. Niessen, John van Swieten, Wiesje M. van der Flier, Inez H. G. B. Ramakers, Aad van der Lugt
2020 J jnl
Differential diagnosis and molecular stratification of gastrointestinal stromal tumors on CT images using a radiomics approach.
CoRR
Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein
2020 J jnl
Learning unbiased registration and joint segmentation: evaluation on longitudinal diffusion MRI.
CoRR
Bo Li, Wiro J. Niessen, Stefan Klein, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron
2020 J jnl
Longitudinal diffusion MRI analysis using Segis-Net: a single-step deep-learning framework for simultaneous segmentation and registration.
CoRR
Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron
2020 J jnl
Multi-atlas image registration of clinical data with automated quality assessment using ventricle segmentation.
Medical Image Anal.
Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer
2020 J jnl
Neuro4Neuro: A neural network approach for neural tract segmentation using large-scale population-based diffusion imaging.
CoRR
Bo Li, Marius de Groot, Rebecca M. E. Steketee, Rozanna Meijboom, Marion Smits, Meike W. Vernooij, Mohammad Arfan Ikram, Jiren Liu, Wiro J. Niessen, Esther E. Bron
2020 J jnl
Neuro4Neuro: A neural network approach for neural tract segmentation using large-scale population-based diffusion imaging.
NeuroImage
Bo Li, Marius de Groot, Rebecca M. E. Steketee, Rozanna Meijboom, Marion Smits, Meike W. Vernooij, Mohammad Arfan Ikram, Jiren Liu, Wiro J. Niessen, Esther E. Bron
2020 J jnl
Orientation Prior and Consistent Model Selection Increase Sensitivity of Tract-Based Spatial Statistics in Crossing-Fiber Regions.
IEEE Trans. Medical Imaging
Georgius A. M. Arkesteijn, Dirk H. J. Poot, Mohammad Arfan Ikram, Wiro J. Niessen, Lucas J. van Vliet, Meike W. Vernooij, Frans M. Vos
2020 J jnl
Position paper on COVID-19 imaging and AI: From the clinical needs and technological challenges to initial AI solutions at the lab and national level towards a new era for AI in healthcare.
Medical Image Anal.
Hayit Greenspan, Raúl San José Estépar, Wiro J. Niessen, Eliot L. Siegel, Mads Nielsen
2020 J jnl
Spatially Regularized Shape Analysis of the Hippocampus Using P-Spline Based Shape Regression.
IEEE J. Biomed. Health Informatics
Hakim C. Achterberg, Johan J. de Rooi, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Paul H. C. Eilers, Marleen de Bruijne
2020 — conf
Towards Segmentation and Spatial Alignment of the Human Embryonic Brain Using Deep Learning for Atlas-Based Registration.
WBIR
Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein
2020 J jnl
Towards segmentation and spatial alignment of the human embryonic brain using deep learning for atlas-based registration.
CoRR
Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein
2020 — conf
Transformation optimization and image blending for 3D liver ultrasound series stitching.
Image-Guided Procedures
Yuanyuan Sun, Taygun Kekec, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum
2020 J jnl
WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning.
CoRR
Sebastian R. van der Voort, Fatih Incekara, Maarten M. J. Wijnenga, Georgios Kapsas, Renske Gahrmann, Joost W. Schouten, Rishi Nandoe Tewarie, Geert J. Lycklama, Philip C. de Witt Hamer, Roelant S. Eijgelaar, Pim J. French, Hendrikus J. Dubbink, Arnaud J. P. E. Vincent, Wiro J. Niessen, Martin J. van den Bent, Marion Smits, Stefan Klein
2020 J jnl
Weakly supervised object detection with 2D and 3D regression neural networks.
Medical Image Anal.
Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2020 J jnl
When Weak Becomes Strong: Robust Quantification of White Matter Hyperintensities in Brain MRI scans.
CoRR
Oliver Werner, Kimberlin M. H. van Wijnen, Wiro J. Niessen, Marius de Groot, Meike W. Vernooij, Florian Dubost, Marleen de Bruijne
2020 J jnl
autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients.
CoRR
Ruisheng Su, Sandra A. P. Cornelissen, Matthijs van der Sluijs, Adriaan C. G. M. van Es, Wim H. van Zwam, Diederik W. J. Dippel, Geert J. Lycklama, Pieter Jan van Doormaal, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum
2019 J jnl
3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI.
Medical Image Anal.
Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2019 — conf
A Hybrid Deep Learning Framework for Integrated Segmentation and Registration: Evaluation on Longitudinal White Matter Tract Changes.
MICCAI (3)
Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron
2019 J jnl
A hybrid deep learning framework for integrated segmentation and registration: evaluation on longitudinal white matter tract changes.
CoRR
Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther Bron
2019 — conf
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks.
CSI@MICCAI
Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Wiro J. Niessen, Marleen de Bruijne
2019 J jnl
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks.
CoRR
Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Gerda Bortsova, Wiro J. Niessen, Marleen de Bruijne
2019 J jnl
Automated Image Registration Quality Assessment Utilizing Deep-learning based Ventricle Extraction in Clinical Data.
CoRR
Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer
2019 — conf
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network.
MICCAI (4)
Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne
2019 J jnl
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network.
CoRR
Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne
2019 — conf
Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI Across Sites.
OR/MLCN@MICCAI
Florian Dubost, Max Dünnwald, Denver Huff, Vincent Scheumann, Frank Schreiber, Meike W. Vernooij, Wiro J. Niessen, Martin Skalej, Stefanie Schreiber, Steffen Oeltze-Jafra, Marleen de Bruijne
2019 — conf
Classification Of Prostate Cancer: High Grade Versus Low Grade Using A Radiomics Approach.
ISBI
Jose M. Castillo T, Martijn P. A. Starmans, Wiro J. Niessen, Ivo Schoots, Stefan Klein, Jifke F. Veenland
2019 J jnl
Disease progression timeline estimation for Alzheimer's disease using discriminative event based modeling.
NeuroImage
Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein
2019 — conf
End-To-End Diagnosis And Segmentation Learning From Cardiac Magnetic Resonance Imaging.
ISBI
Gerard Snaauw, Dong Gong, Gabriel Maicas, Anton van den Hengel, Wiro J. Niessen, Johan Verjans, Gustavo Carneiro
2019 J jnl
Enlarged perivascular spaces in brain MRI: Automated quantification in four regions.
NeuroImage
Florian Dubost, Pinar Yilmaz, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2019 — conf
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia.
IPMI
Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein
2019 J jnl
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia.
CoRR
Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein
2019 J jnl
Groupwise Multichannel Image Registration.
IEEE J. Biomed. Health Informatics
Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein
2019 — conf
Hydranet: Data Augmentation for Regression Neural Networks.
MICCAI (4)
Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2019 J jnl
Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics.
Neuroinformatics
Natalia Vilor-Tejedor, Mohammad Arfan Ikram, Gennady V. Roshchupkin, Alejandro Cáceres, Silvia Alemany, Meike W. Vernooij, Wiro J. Niessen, Cornelia M. van Duijn, Jordi Sunyer, Hieab H. Adams, Juan R. González
2019 J jnl
Multi-Site Meta-Analysis of Morphometry.
IEEE ACM Trans. Comput. Biol. Bioinform.
Neda Jahanshad, Joshua Faskowitz, Gennady V. Roshchupkin, Derrek P. Hibar, Boris A. Gutman, Nicholas J. Tustison, Hieab H. H. Adams, Wiro J. Niessen, Meike W. Vernooij, Mohammad Arfan Ikram, Marcel P. Zwiers, Alejandro Arias-Vasquez, Barbara Franke, Jennifer L. Kroll, Benson Mwangi, Jair C. Soares, Alex Ing, Sylvane Desrivières, Gunter Schumann, Narelle K. Hansell, Greig I. de Zubicaray, Katie L. McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson
2019 J jnl
Multiple-correlation similarity for block-matching based fast CT to ultrasound registration in liver interventions.
Medical Image Anal.
Jyotirmoy Banerjee, Yuanyuan Sun, Camiel Klink, Renske Gahrmann, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2019 J jnl
Patterns of functional connectivity in an aging population: The Rotterdam Study.
NeuroImage
Hazel I. Zonneveld, Raimon H. R. Pruim, Daniel Bos, Henri A. Vrooman, Ryan L. Muetzel, Albert Hofman, Serge A. R. B. Rombouts, Aad van der Lugt, Wiro J. Niessen, Mohammad Arfan Ikram, Meike W. Vernooij
2019 J jnl
Reproducible White Matter Tract Segmentation Using 3D U-Net on a Large-scale DTI Dataset.
CoRR
Bo Li, Marius de Groot, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Esther Bron
2019 J jnl
Weakly Supervised Object Detection with 2D and 3D Regression Neural Networks.
CoRR
Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2018 J jnl
3D Regression Neural Network for the Quantification of Enlarged Perivascular Spaces in Brain MRI.
CoRR
Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2018 J jnl
A spatio-temporal reference model of the aging brain.
NeuroImage
Wyke Huizinga, Dirk H. J. Poot, Meike W. Vernooij, Gennady Roshchupkin, Esther Bron, Mohammad Arfan Ikram, Daniel Rueckert, Wiro J. Niessen, Stefan Klein
2018 — conf
Averaged Stochastic Optimization for Medical Image Registration Based on Variance Reduction.
WBIR
Wei Sun, Dirk H. J. Poot, Xuan Yang, Wiro J. Niessen, Stefan Klein
2018 B conf
Classification of malignant and benign liver tumors using a radiomics approach.
Image Processing
Martijn P. A. Starmans, Razvan L. Miclea, Sebastian R. van der Voort, Wiro J. Niessen, Maarten G. Thomeer, Stefan Klein
2018 J jnl
Disconnection due to white matter hyperintensities is associated with lower cognitive scores.
NeuroImage
Carolyn D. Langen, Lotte G. M. Cremers, Marius de Groot, Tonya White, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij
2018 J jnl
Disease Progression Timeline Estimation for Alzheimer's Disease using Discriminative Event Based Modeling.
CoRR
Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein, Alzheimer's Disease Neuroimaging Initiative
2018 J jnl
End-to-End Diagnosis and Segmentation Learning from Cardiac Magnetic Resonance Imaging.
CoRR
Gerard Snaauw, Dong Gong, Gabriel Maicas, Anton van den Hengel, Wiro J. Niessen, Johan Verjans, Gustavo Carneiro
2018 J jnl
Hydranet: Data Augmentation for Regression Neural Networks.
CoRR
Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2018 J jnl
Intrasubject multimodal groupwise registration with the conditional template entropy.
Medical Image Anal.
Mathias Polfliet, Stefan Klein, Wyke Huizinga, Margarethus M. Paulides, Wiro J. Niessen, Jef Vandemeulebroucke
2018 J jnl
Is the winner really the best? A critical analysis of common research practice in biomedical image analysis competitions.
CoRR
Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro J. Niessen, Nasir M. Rajpoot, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Christian Stock, Danail Stoyanov, Abdel Aziz Taha, Fons van der Sommen, Ching-Wei Wang, Marc-André Weber, Guoyan Zheng, Pierre Jannin, Annette Kopp-Schneider
2018 — conf
Reproducible White Matter Tract Segmentation Using 3D U-Net on a Large-scale DTI Dataset.
MLMI@MICCAI
Bo Li, Marius de Groot, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Esther E. Bron
2018 — conf
Towards Robust CT-Ultrasound Registration Using Deep Learning Methods.
MLCN/DLF/iMIMIC@MICCAI
Yuanyuan Sun, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum
2017 — conf
A Discriminative Event Based Model for Alzheimer's Disease Progression Modeling.
IPMI
Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein
2017 J jnl
A Discriminative Event Based Model for Alzheimer's Disease Progression Modeling.
CoRR
Vikram Venkatraghavan, Esther Bron, Wiro J. Niessen, Stefan Klein
2017 J jnl
A Hidden Markov Model for 3D Catheter Tip Tracking With 2D X-ray Catheterization Sequence and 3D Rotational Angiography.
IEEE Trans. Medical Imaging
Pierre Ambrosini, Ihor Smal, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2017 J jnl
Automatic online layer separation for vessel enhancement in X-ray angiograms for percutaneous coronary interventions.
Medical Image Anal.
Hua Ma, Ayla Hoogendoorn, Evelyn Regar, Wiro J. Niessen, Theo van Walsum
2017 J jnl
Contour segmentation of the intima, media, and adventitia layers in intracoronary OCT images: application to fully automatic detection of healthy wall regions.
Int. J. Comput. Assist. Radiol. Surg.
Guillaume Zahnd, Ayla Hoogendoorn, Nicolas Combaret, Antonios Karanasos, Emilie Péry, Laurent Sarry, Pascal Motreff, Wiro J. Niessen, Evelyn Regar, Gijs van Soest, Frank Gijsen, Theo van Walsum
2017 J jnl
Editorial: MAPPING: MAnagement and Processing of Images for Population ImagiNG.
Frontiers ICT
Michel Dojat, David N. Kennedy, Wiro J. Niessen
2017 — conf
Evaluating Classifiers for Atherosclerotic Plaque Component Segmentation in MRI.
MIUA
Arna van Engelen, Marleen de Bruijne, Torben Schneider, Anouk C. van Dijk, M. Eline Kooi, Jeroen Hendrikse, Aart J. Nederveen, Wiro J. Niessen, René M. Botnar
2017 — conf
Fully Automatic and Real-Time Catheter Segmentation in X-Ray Fluoroscopy.
MICCAI (2)
Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2017 J jnl
Fully Automatic and Real-Time Catheter Segmentation in X-Ray Fluoroscopy.
CoRR
Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2017 — conf
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network.
MICCAI (3)
Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2017 J jnl
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network.
CoRR
Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne
2017 — conf
Heritability of connectivity and disconnectivity of the brain in a population-based study.
ISBI
Carolyn D. Langen, Gennady V. Roshchupkin, Hieab H. Adams, Marius de Groot, Frans Vos, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen
2017 — conf
Invited Talk: Big Data in Medical Image Computing.
Bildverarbeitung für die Medizin
Wiro J. Niessen
2017 B conf
Laplacian eigenmaps for multimodal groupwise image registration.
Image Processing
Mathias Polfliet, Stefan Klein, Wiro J. Niessen, Jef Vandemeulebroucke
2017 — conf
Longitudinal analysis of diffusion-weighted MRI with a ball-and-sticks model.
ISBI
Georgius A. M. Arkesteijn, Dirk H. J. Poot, M. Niestijl, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos
2017 — ed.
Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - Fifth International Workshop, CMMI 2017, Second International Workshop, RAMBO 2017, and First International Workshop, SWITCH 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 14, 2017, Proceedings
CMMI/RAMBO/SWITCH@MICCAI
M. Jorge Cardoso, Tal Arbel, Fei Gao, Bernhard Kainz, Theo van Walsum, Kuangyu Shi, Kanwal K. Bhatia, Roman Peter, Tom Vercauteren, Mauricio Reyes, Adrian V. Dalca, Roland Wiest, Wiro J. Niessen, Bart J. Emmer
2017 — conf
Radiogenomic classification of the 1p/19q status in presumed low-grade gliomas.
ISBI
Sebastian R. van der Voort, Renske Gahrmann, Martin J. van den Bent, Arnaud J. P. E. Vincent, Wiro J. Niessen, Marion Smits, Stefan Klein
2017 J jnl
Randomly Perturbed B-Splines for Nonrigid Image Registration.
IEEE Trans. Pattern Anal. Mach. Intell.
Wei Sun, Wiro J. Niessen, Stefan Klein
2017 J jnl
Stochastic optimization with randomized smoothing for image registration.
Medical Image Anal.
Wei Sun, Dirk H. J. Poot, Ihor Smal, Xuan Yang, Wiro J. Niessen, Stefan Klein
2017 — conf
The Effect of Non-contrast CT Slice Thickness on Thrombus Density and Perviousness Assessment.
CMMI/RAMBO/SWITCH@MICCAI
Manon L. Tolhuisen, J. Enthoven, E. M. M. Santos, Wiro J. Niessen, L. F. M. Beenen, Diederik W. J. Dippel, Aad van der Lugt, Wim H. van Zwam, Yvo B. W. E. M. Roos, Robert J. van Oostenbrugge, Charles B. L. M. Majoie, Henk A. Marquering
2017 — conf
The structural disconnectome: A pathology-sensitive extension of the structural connectome.
ISBI
Carolyn D. Langen, Meike W. Vernooij, Lotte G. M. Cremers, Wyke Huizinga, Marius de Groot, Mohammad Arfan Ikram, Tonya White, Wiro J. Niessen
2017 J jnl
Using GOMS and NASA-TLX to Evaluate Human-Computer Interaction Process in Interactive Segmentation.
Int. J. Hum. Comput. Interact.
Anjana Ramkumar, Pieter Jan Stappers, Wiro J. Niessen, Sonja Adebahr, Tanja Schimek-Jasch, Ursula Nestle, Yu Song
2016 J jnl
4D Ultrasound Tracking of Liver and its Verification for TIPS Guidance.
IEEE Trans. Medical Imaging
Jyotirmoy Banerjee, Camiel Klink, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2016 J jnl
An Automatic 3D Facial Landmarking Algorithm Using 2D Gabor Wavelets.
IEEE Trans. Image Process.
Markus A. de Jong, Andreas Wollstein, Clifford Ruff, David J. Dunaway, Pirro Hysi, Tim Spector, Fan Liu, Wiro J. Niessen, Maarten J. Koudstaal, Manfred Kayser, Eppo B. Wolvius, Stefan Böhringer
2016 J jnl
Carotid Artery Wall Segmentation in Multispectral MRI by Coupled Optimal Surface Graph Cuts.
IEEE Trans. Medical Imaging
Andrés M. Arias Lorza, Jens Petersen, Arna van Engelen, Mariana Selwaness, Aad van der Lugt, Wiro J. Niessen, Marleen de Bruijne
2016 J jnl
Fastr: A Workflow Engine for Advanced Data Flows in Medical Image Analysis.
Frontiers ICT
Hakim C. Achterberg, Marcel Koek, Wiro J. Niessen
2016 J jnl
Fusion of fibrous cap thickness and wall shear stress to assess plaque vulnerability in coronary arteries: a pilot study.
Int. J. Comput. Assist. Radiol. Surg.
Guillaume Zahnd, Jelle Schrauwen, Antonios Karanasos, Evelyn Regar, Wiro J. Niessen, Theo van Walsum, Frank Gijsen
2016 J jnl
MR brain image analysis in dementia: From quantitative imaging biomarkers to ageing brain models and imaging genetics.
Medical Image Anal.
Wiro J. Niessen
2016 — conf
Modeling the brain morphology distribution in the general aging population.
Biomedical Applications in Molecular, Structural, and Functional Imaging
Wyke Huizinga, Dirk H. J. Poot, Gennady V. Roshchupkin, Esther E. Bron, Mohammad Arfan Ikram, Meike W. Vernooij, Daniel Rueckert, Wiro J. Niessen, Stefan Klein
2016 J jnl
PCA-based groupwise image registration for quantitative MRI.
Medical Image Anal.
Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, R. Klaassen, Bram F. Coolen, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Mathias Polfliet, Jef Vandemeulebroucke, Alexander Leemans, Wiro J. Niessen, Stefan Klein
2016 — conf
Total Correlation-Based Groupwise Image Registration for Quantitative MRI.
CVPR Workshops
Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Matthijs van Kranenburg, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein
2016 J jnl
User Interaction in Semi-Automatic Segmentation of Organs at Risk: a Case Study in Radiotherapy.
J. Digit. Imaging
Anjana Ramkumar, Jose Dolz, Hortense A. Kirisli, Sonja Adebahr, Tanja Schimek-Jasch, Ursula Nestle, Laurent Massoptier, Edit Varga, Pieter Jan Stappers, Wiro J. Niessen, Yu Song
2015 — conf
3D Catheter Tip Tracking in 2D X-Ray Image Sequences Using a Hidden Markov Model and 3D Rotational Angiography.
AE-CAI
Pierre Ambrosini, Ihor Smal, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2015 — conf
CSF contamination-invariant statistics in diffusion-weighted MRI.
ISBI
Georgius A. M. Arkesteijn, Dirk H. J. Poot, Meike de Groot, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos
2015 J jnl
Continuous roadmapping in liver TACE procedures using 2D-3D catheter-based registration.
Int. J. Comput. Assist. Radiol. Surg.
Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2015 J jnl
Fast and robust 3D ultrasound registration - Block and game theoretic matching.
Medical Image Anal.
Jyotirmoy Banerjee, Camiel Klink, Edward D. Peters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2015 J jnl
Feature Selection Based on the SVM Weight Vector for Classification of Dementia.
IEEE J. Biomed. Health Informatics
Esther E. Bron, Marion Smits, Wiro J. Niessen, Stefan Klein
2015 — conf
Groupwise image registration of multimodal head-and-neck images.
ISBI
Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein
2015 J jnl
IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research.
Neuroinformatics
Kai Yan Eugene Leung, Fedde van der Lijn, Henri A. Vrooman, Miriam C. J. M. Sturkenboom, Wiro J. Niessen
2015 — conf
Layer Separation for Vessel Enhancement in Interventional X-ray Angiograms Using Morphological Filtering and Robust PCA.
AE-CAI
Hua Ma, Gerardo Dibildox, Jyotirmoy Banerjee, Wiro J. Niessen, Carl J. Schultz, Evelyn Regar, Theo van Walsum
2015 J jnl
Lumen Segmentation and Motion Estimation in B-Mode and Contrast-Enhanced Ultrasound Images of the Carotid Artery in Patients With Atherosclerotic Plaque.
IEEE Trans. Medical Imaging
Diego D. B. Carvalho, Zeynettin Akkus, Stijn C. H. van den Oord, Arend F. L. Schinkel, Antonius F. W. van der Steen, Wiro J. Niessen, Johan G. Bosch, Stefan Klein
2015 J jnl
Multi-Center MRI Carotid Plaque Component Segmentation Using Feature Normalization and Transfer Learning.
IEEE Trans. Medical Imaging
Arna van Engelen, Anouk C. van Dijk, Martine T. B. Truijman, Ronald van't Klooster, Annegreet van Opbroek, Aad van der Lugt, Wiro J. Niessen, M. Eline Kooi, Marleen de Bruijne
2015 J jnl
Quantification of fibrous cap thickness in intracoronary optical coherence tomography with a contour segmentation method based on dynamic programming.
Int. J. Comput. Assist. Radiol. Surg.
Guillaume Zahnd, Antonios Karanasos, Gijs van Soest, Evelyn Regar, Wiro J. Niessen, Frank Gijsen, Theo van Walsum
2015 J jnl
Semi-automatic MRI segmentation and volume quantification of intra-plaque hemorrhage.
Int. J. Comput. Assist. Radiol. Surg.
Hui Tang, Mariana Selwaness, Reinhard Hameeteman, Anouk C. van Dijk, Aad van der Lugt, Jacqueline C. M. Witteman, Wiro J. Niessen, Lucas J. van Vliet, Theo van Walsum
2015 J jnl
XNAT imaging platform for BioMedBridges and CTMM TraIT.
J. Clin. Bioinform.
Stefan Klein, Erwin Vast, Johan van Soest, Andre Dekker, Marcel Koek, Wiro J. Niessen
2014 — conf
2D/3D Catheter-Based Registration for Image Guidance in TACE of Liver Tumors.
IPCAI
Pierre Ambrosini, Danny Ruijters, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum
2014 — conf
4D Liver Ultrasound Registration.
WBIR
Jyotirmoy Banerjee, Camiel Klink, Edward D. Peters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum
2014 Misc conf
An adaptive distributed resampling algorithm with non-proportional allocation.
ICASSP
Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini
2014 — conf
Feature Selection Based on SVM Significance Maps for Classification of Dementia.
MLMI
Esther Bron, Marion Smits, John van Swieten, Wiro J. Niessen, Stefan Klein
2014 — conf
Free-Form Deformation Using Lower-Order B-spline for Nonrigid Image Registration.
MICCAI (1)
Wei Sun, Wiro J. Niessen, Stefan Klein
2014 — conf
Fuzzy logic based detection of neuron bifurcations in microscopy images.
ISBI
Miroslav Radojevic, Ihor Smal, Wiro J. Niessen, Erik Meijering
2014 B conf
Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen.
Image Processing
Jean-Marie Guyader, Livia Bernardin, Naomi H. M. Douglas, Dirk H. J. Poot, Wiro J. Niessen, Stefan Klein
2014 — conf
Non-rigid Groupwise Image Registration for Motion Compensation in Quantitative MRI.
WBIR
Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, Henk Smit, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Heleen M. M. van Beusekom, Bram F. Coolen, Alexander Leemans, Wiro J. Niessen, Stefan Klein
2014 B conf
Nonrigid motion compensation in B-mode and contrast enhanced ultrasound image sequences of the carotid artery.
Image Processing
Diego D. B. Carvalho, Zeynettin Akkus, Johan G. Bosch, Stijn C. H. van den Oord, Wiro J. Niessen, Stefan Klein
2014 J jnl
Oriented Gaussian Mixture Models for Nonrigid 2D/3D Coronary Artery Registration.
IEEE Trans. Medical Imaging
Nora Baka, Coert Metz, Carl J. Schultz, Robert Jan van Geuns, Wiro J. Niessen, Theo van Walsum
2014 — conf
Randomly Perturbed Free-Form Deformation for Nonrigid Image Registration.
WBIR
Wei Sun, Wiro J. Niessen, Stefan Klein
2014 — conf
Semi-automated Quantification of Fibrous Cap Thickness in Intracoronary Optical Coherence Tomography.
IPCAI
Guillaume Zahnd, Antonios Karanasos, Gijs van Soest, Evelyn Regar, Wiro J. Niessen, Frank Gijsen, Theo van Walsum
2014 B conf
Wavelet based free-form deformations for nonrigid registration.
Image Processing
Wei Sun, Wiro J. Niessen, Stefan Klein
2013 J jnl
Automatic carotid artery distensibility measurements from CTA using nonrigid registration.
Medical Image Anal.
K. Hameeteman, Sietske Rozie, Coert Metz, Rashindra Manniesing, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen, Stefan Klein
2013 B conf
Bias correction of maximum likelihood estimation in quantitative MRI.
Image Processing
Dirk H. J. Poot, Gyula Kotek, Wiro J. Niessen, Stefan Klein
2013 — conf
Carotid Artery Lumen Segmentation in 3D Free-Hand Ultrasound Images Using Surface Graph Cuts.
MICCAI (2)
Andrés M. Arias Lorza, Diego D. B. Carvalho, Jens Petersen, Anouk C. van Dijk, Aad van der Lugt, Wiro J. Niessen, Stefan Klein, Marleen de Bruijne
2013 — conf
Groupwise Registration for Correcting Subject Motion and Eddy Current Distortions in Diffusion MRI Using a PCA Based Dissimilarity Metric.
CDMRI/MMBC@MICCAI
Wyke Huizinga, Coert T. Metz, Dirk H. J. Poot, Meike de Groot, Wiro J. Niessen, Alexander Leemans, Stefan Klein
2013 J jnl
Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration.
NeuroImage
Marius de Groot, Meike W. Vernooij, Stefan Klein, Mohammad Arfan Ikram, Frans M. Vos, Stephen M. Smith, Wiro J. Niessen, Jesper L. R. Andersson
2013 B conf
Local appearance features for robust MRI brain structure segmentation across scanning protocols.
Image Processing
Hakim C. Achterberg, Dirk H. J. Poot, Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Marleen de Bruijne
2013 J jnl
PPF - A Parallel Particle Filtering Library.
CoRR
Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini
2013 J jnl
Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering.
CoRR
Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini
2013 J jnl
Registration of 3D+t Coronary CTA and Monoplane 2D+t X-Ray Angiography.
IEEE Trans. Medical Imaging
Coert Metz, Michiel Schaap, Stefan Klein, Nora Baka, Lisan Neefjes, Carl J. Schultz, Wiro J. Niessen, Theo van Walsum
2013 J jnl
Simultaneous Multiresolution Strategies for Nonrigid Image Registration.
IEEE Trans. Image Process.
Wei Sun, Wiro J. Niessen, Marijn van Stralen, Stefan Klein
2013 J jnl
Special issue on Shape Modeling in Medical Image Analysis.
Comput. Vis. Image Underst.
Wiro J. Niessen, Shuo Li, Song Wang
2013 J jnl
Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography.
Medical Image Anal.
Hortense A. Kirisli, Michiel Schaap, Coert Metz, A. S. Dharampal, W. B. Meijboom, S. L. Papadopoulou, A. Dedic, K. Nieman, Michiel A. de Graaf, M. F. L. Meijs, M. J. Cramer, Alexander Broersen, Suheyla Cetin, Abouzar Eslami, Leonardo Floréz-Valencia, Kuo-Lung Lor, Bogdan J. Matuszewski, Imen Melki, Brian Mohr, Ilkay Öksüz, Rahil Khurram Shahzad, Chunliang Wang, Pieter H. Kitslaar, Gözde B. Ünal, Amin Katouzian, Maciej Orkisz, Chung-Ming Chen, Frédéric Precioso, Laurent Najman, S. Masood, Devrim Ünay, Lucas J. van Vliet, Rodrigo Moreno, Roman Goldenberg, Erald Vuçini, Gabriel P. Krestin, Wiro J. Niessen, Theo van Walsum
2013 J jnl
Statistical coronary motion models for 2D + t/3D registration of X-ray coronary angiography and CTA.
Medical Image Anal.
Nora Baka, Coert Metz, Carl J. Schultz, Lisan Neefjes, Robert Jan van Geuns, Boudewijn P. F. Lelieveldt, Wiro J. Niessen, Theo van Walsum, Marleen de Bruijne
2013 — conf
Super-Resolution Reconstruction Using Cross-Scale Self-similarity in Multi-slice MRI.
MICCAI (3)
Esben Plenge, Dirk H. J. Poot, Wiro J. Niessen, Erik Meijering
2012 — conf
3D LBP-Based Rotationally Invariant Region Description.
ACCV Workshops (1)
Jyotirmoy Banerjee, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum
2012 — conf
A computer aided detection system for cerebral microbleeds in brain MRI.
ISBI
Babak Ghafaryasl, Fedde van der Lijn, Marielle Poels, Henri A. Vrooman, Mohammad Arfan Ikram, Wiro J. Niessen, Aad van der Lugt, Meike W. Vernooij, Marleen de Bruijne
2012 J jnl
Automated Brain Structure Segmentation Based on Atlas Registration and Appearance Models.
IEEE Trans. Medical Imaging
Fedde van der Lijn, Marleen de Bruijne, Stefan Klein, Tom den Heijer, Yoo Young Hoogendam, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen
2012 J jnl
Automated measurement of local white matter lesion volume.
NeuroImage
Fedde van der Lijn, Benjamin F. J. Verhaaren, Mohammad Arfan Ikram, Stefan Klein, Marleen de Bruijne, Henri A. Vrooman, Meike W. Vernooij, Alexander Hammers, Daniel Rueckert, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen
2012 — conf
Automatic detection of calcified lesions in the descending aorta using contrast enhanced CT scans.
ISBI
Rahil Khurram Shahzad, Michiel Schaap, Frederico Bastos Goncalves, Coert Metz, Hui Tang, Theo van Walsum, Adriaan Moelker, Lucas J. van Vliet, Wiro J. Niessen
2012 J jnl
Cardiac MR perfusion image processing techniques: A survey.
Medical Image Anal.
Vikas Gupta, Hortense A. Kirisli, Emile A. Hendriks, Rob J. van der Geest, Martijn van de Giessen, Wiro J. Niessen, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2012 J jnl
Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction.
Comput. Medical Imaging Graph.
Alfonso A. Isola, Coert Metz, Michiel Schaap, Stefan Klein, Michael Grass, Wiro J. Niessen
2012 — conf
Carotid Artery Wall Segmentation by Coupled Surface Graph Cuts.
MCV
Andres Arias, Jens Petersen, Arna van Engelen, Hui Tang, Mariana Selwaness, Jacqueline C. M. Witteman, Aad van der Lugt, Wiro J. Niessen, Marleen de Bruijne
2012 J jnl
Comprehensive visualization of multimodal cardiac imaging data for assessment of coronary artery disease: first clinical results of the SMARTVis tool.
Int. J. Comput. Assist. Radiol. Surg.
Hortense A. Kirisli, Vikas Gupta, Sharon W. Kirschbaum, Alexia Rossi, Coert Metz, Michiel Schaap, Robert Jan van Geuns, Nico Mollet, Boudewijn P. F. Lelieveldt, Johan H. C. Reiber, Theo van Walsum, Wiro J. Niessen
2012 J jnl
Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound.
Int. J. Comput. Assist. Radiol. Surg.
Diego D. B. Carvalho, Stefan Klein, Zeynettin Akkus, Gerrit L. ten Kate, Arend F. L. Schinkel, Johan G. Bosch, Aad van der Lugt, Wiro J. Niessen
2012 — conf
Evaluation of Diffusion Filters for 3D CTA Liver Vessel Enhancement.
Abdominal Imaging
Ha Manh Luu, Adriaan Moelker, Camiel Klink, Adriënne Mendrik, Wiro J. Niessen, Theo van Walsum
2012 — conf
Hierarchical vs. Simultaneous Multiresolution Strategies for Nonrigid Image Registration.
WBIR
Wei Sun, Wiro J. Niessen, Stefan Klein
2012 — conf
Hyperthermia critical tissues automatic segmentation of head and neck CT images using atlas registration and graph cuts.
ISBI
Valerio Fortunati, René F. Verhaart, Fedde van der Lijn, Wiro J. Niessen, Jifke F. Veenland, Maarten M. Paulides, Theo van Walsum
2012 B conf
Intracranial aneurysm growth quantification in CTA.
Image Processing
Azadeh Firouzian, Rashindra Manniesing, Coert T. Metz, Stefan Klein, Birgitta K. Velthuis, Gabriel J. E. Rinkel, Aad van der Lugt, Wiro J. Niessen
2012 — conf
Lumen segmentation of atherosclerotic carotid arteries in CTA.
ISBI
Hui Tang, Theo van Walsum, Reinhard Hameeteman, Michiel Schaap, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen
2012 — conf
Quantification of DCE-MRI: A validation of three techniques with 3D-histology.
ISBI
Karin Bol, Joost C. Haeck, Lejla Alic, Wiro J. Niessen, Marion de Jong, Monique Bernsen, Jifke F. Veenland
2012 — conf
Quantitative imaging biomarkers in neurologic disease: Population study perspective.
ISBI
Wiro J. Niessen, Henri A. Vrooman, Renske de Boer, Fedde van der Lijn, Hakim C. Achterberg, Marcel Koek, Stefan Klein, Aad van der Lugt, Marleen de Bruijne, Mohammad Arfan Ikram, Meike W. Vernooij
2012 — conf
Registration of Free-Hand Ultrasound and MRI of Carotid Arteries through Combination of Point-Based and Intensity-Based Algorithms.
WBIR
Diego D. B. Carvalho, Stefan Klein, Zeynettin Akkus, Gerrit L. ten Kate, Hui Tang, Mariana Selwaness, Arend F. L. Schinkel, Johan G. Bosch, Aad van der Lugt, Wiro J. Niessen
2012 J jnl
Regression-Based Cardiac Motion Prediction From Single-Phase CTA.
IEEE Trans. Medical Imaging
Coert Metz, Nora Baka, Hortense A. Kirisli, Michiel Schaap, Stefan Klein, Lisan Neefjes, Nico Mollet, Boudewijn P. F. Lelieveldt, Marleen de Bruijne, Wiro J. Niessen, Theo van Walsum
2012 J jnl
Reversible jump MCMC methods for fully automatic motion analysis in tagged MRI.
Medical Image Anal.
Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Piotr Wielopolski, Adriaan Moelker, Tirza Springeling, Monique Bernsen, Wiro J. Niessen, Erik Meijering
2012 — conf
Robust Motion Correction in the Frequency Domain of Cardiac MR Stress Perfusion Sequences.
MICCAI (1)
Vikas Gupta, Martijn van de Giessen, Hortense A. Kirisli, Sharon W. Kirschbaum, Wiro J. Niessen, Boudewijn P. F. Lelieveldt
2012 J jnl
Semiautomatic carotid lumen segmentation for quantification of lumen geometry in multispectral MRI.
Medical Image Anal.
Hui Tang, Theo van Walsum, Robbert S. van Onkelen, Reinhard Hameeteman, Stefan Klein, Michiel Schaap, Fufa L. Tori, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen
2012 J jnl
Statistical Shape Model-Based Femur Kinematics From Biplane Fluoroscopy.
IEEE Trans. Medical Imaging
Nora Baka, Marleen de Bruijne, Theo van Walsum, Bart L. Kaptein, J. E. Giphart, Michiel Schaap, Wiro J. Niessen, Boudewijn P. F. Lelieveldt
2012 J jnl
Structural and diffusion MRI measures of the hippocampus and memory performance.
NeuroImage
Tom den Heijer, Fedde van der Lijn, Meike W. Vernooij, Marius de Groot, P. J. Koudstaal, Aad van der Lugt, Gabriel P. Krestin, Albert Hofman, Wiro J. Niessen, Monique M. B. Breteler
2012 B conf
Super-resolution in MRI: better images faster?
Image Processing
Esben Plenge, Dirk H. J. Poot, Monique Bernsen, Gyula Kotek, Gavin Houston, Piotr Wielopolski, Louise van der Weerd, Wiro J. Niessen, Erik Meijering
2012 — conf
Super-resolution reconstruction of whole-body MRI mouse data: An interactive approach.
ISBI
Artem Khmelinskii, Esben Plenge, Peter Kok, Oleh Dzyubachyk, Dirk H. J. Poot, E. Suidgeest, Charl P. Botha, Wiro J. Niessen, Louise van der Weerd, Erik Meijering, Boudewijn P. F. Lelieveldt
2012 — conf
Supervised in-vivo plaque characterization incorporating class label uncertainty.
ISBI
Arna van Engelen, Wiro J. Niessen, Stefan Klein, Harald C. Groen, Hence J. M. Verhagen, Jolanda J. Wentzel, Aad van der Lugt, Marleen de Bruijne
2011 J jnl
2D-3D shape reconstruction of the distal femur from stereo X-ray imaging using statistical shape models.
Medical Image Anal.
Nora Baka, Bart L. Kaptein, Marleen de Bruijne, Theo van Walsum, J. E. Giphart, Wiro J. Niessen, Boudewijn P. F. Lelieveldt
2011 — conf
A patient-specific visualization tool for comprehensive analysis of coronary CTA and perfusion MRI data.
Image-Guided Procedures
Hortense A. Kirisli, V. Gupta, Sharon W. Kirschbaum, Lisan Neefjes, Robert Jan van Geuns, Nico Mollet, Boudewijn P. F. Lelieveldt, Johan H. C. Reiber, Theo van Walsum, Wiro J. Niessen
2011 — conf
Alignment of 4D Coronary CTA with Monoplane X-ray Angiography.
AE-CAI
Coert Metz, Michiel Schaap, Stefan Klein, Peter R. Rijnbeek, Lisan Neefjes, Nico Mollet, Carl J. Schultz, Patrick W. Serruys, Wiro J. Niessen, Theo van Walsum
2011 — conf
Automated lineage tree reconstruction from Caenorhabditis elegans image data using particle filtering based cell tracking.
ISBI
Noemí Carranza-Herrezuelo, Ihor Smal, Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering
2011 — conf
Comparison of Shape Regression Methods under Landmark Position Uncertainty.
MICCAI (2)
Nora Baka, Coert Metz, Michiel Schaap, Boudewijn P. F. Lelieveldt, Wiro J. Niessen, Marleen de Bruijne
2011 J jnl
Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading.
Medical Image Anal.
K. Hameeteman, Maria A. Zuluaga, Moti Freiman, Leo Joskowicz, Olivier Cuisenaire, Leonardo Floréz-Valencia, Mehmet Akif Gülsün, Karl Krissian, Julien Mille, Wilbur C. K. Wong, Maciej Orkisz, Hüseyin Tek, Marcela Hernández Hoyos, Fethallah Benmansour, Albert C. S. Chung, Sietske Rozie, M. van Gils, L. van den Borne, Jacob Sosna, Phillip M. Berman, N. Cohen, Philippe Douek, I. Sánchez, M. Aissat, Michiel Schaap, Coert Metz, Gabriel P. Krestin, Aad van der Lugt, Wiro J. Niessen, Theo van Walsum
2011 — conf
Improved Tissue Segmentation by Including an MR Acquisition Model.
MBIA
Dirk H. J. Poot, Marleen de Bruijne, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen
2011 B conf
Multispectral MRI centerline tracking in carotid arteries.
Image Processing
Hui Tang, Theo van Walsum, Robbert S. van Onkelen, Stefan Klein, Reinhard Hameeteman, Michiel Schaap, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen
2011 J jnl
Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach.
Medical Image Anal.
Coert Metz, Stefan Klein, Michiel Schaap, Theo van Walsum, Wiro J. Niessen
2011 — conf
Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology.
Computer-Aided Diagnosis
Arna van Engelen, Marleen de Bruijne, Stefan Klein, Hence J. M. Verhagen, Harald C. Groen, Jolanda J. Wentzel, Aad van der Lugt, Wiro J. Niessen
2011 — conf
Quantitative comparison of tracking methods for motion analysis in tagged MRI.
ISBI
Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Wiro J. Niessen, Erik Meijering
2011 B conf
Region based level set segmentation of the outer wall of the carotid bifurcation in CTA.
Image Processing
Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Sietske Rozie, Aad van der Lugt, Wiro J. Niessen
2011 J jnl
Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA.
IEEE Trans. Medical Imaging
Michiel Schaap, Theo van Walsum, Lisan Neefjes, Coert Metz, Ermanno Capuano, Marleen de Bruijne, Wiro J. Niessen
2011 — conf
Semi-automated Subcutaneous and Visceral Adipose Tissue Quantification in Computed Tomography.
Abdominal Imaging
Marcel Koek, Frederico Bastos Goncalves, Don Poldermans, Wiro J. Niessen, Rashindra Manniesing
2011 J jnl
Statistical analysis of minimum cost path based structural brain connectivity.
NeuroImage
Renske de Boer, Michiel Schaap, Fedde van der Lijn, Henri A. Vrooman, Marius de Groot, Aad van der Lugt, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen
2011 — conf
Trans-Dimensional MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI.
MICCAI (1)
Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Wiro J. Niessen, Erik Meijering
2010 — conf
A patient-specific coronary density estimate.
ISBI
Rahil Khurram Shahzad, Michiel Schaap, Theo van Walsum, Stefan Klein, Annick C. Weustink, Lucas J. van Vliet, Wiro J. Niessen
2010 J jnl
Accuracy and reproducibility study of automatic MRI brain tissue segmentation methods.
NeuroImage
Renske de Boer, Henri A. Vrooman, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Aad van der Lugt, Wiro J. Niessen
2010 J jnl
Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy.
IEEE Trans. Medical Imaging
Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering
2010 J jnl
Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci.
Bioinform.
Oleh Dzyubachyk, Jeroen Essers, Wiggert A. van Cappellen, Céline Baldeyron, Akiko Inagaki, Wiro J. Niessen, Erik Meijering
2010 — conf
Automated carotid artery distensibility measurements from CTA using nonrigid registration.
ISBI
Reinhard Hameeteman, Sietske Rozie, Coert Metz, Stefan Klein, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen
2010 — conf
Confidence of model based shape reconstruction from sparse data.
ISBI
Nora Baka, Marleen de Bruijne, Johan H. C. Reiber, Wiro J. Niessen, Boudewijn P. F. Lelieveldt
2010 — conf
Coronary Motion Estimation from CTA Using Probability Atlas and Diffeomorphic Registration.
MIAR
Dong Ping Zhang, Laurent Risser, François-Xavier Vialard, Philip J. Edwards, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert
2010 — conf
Coronary artery motion modeling from 3D cardiac CT sequences using template matching and graph search.
ISBI
Dong Ping Zhang, Laurent Risser, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert
2010 J jnl
Correction to "Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy".
IEEE Trans. Medical Imaging
Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering
2010 B conf
Correspondence free 3D statistical shape model fitting to sparse x-ray projections.
Image Processing
Nora Baka, Wiro J. Niessen, Bart L. Kaptein, Theo van Walsum, Luca Ferrarini, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2010 — conf
Early diagnosis of dementia based on intersubject whole-brain dissimilarities.
ISBI
Stefan Klein, Marco Loog, Fedde van der Lijn, Tom den Heijer, Alexander Hammers, Marleen de Bruijne, Aad van der Lugt, Robert P. W. Duin, Monique M. B. Breteler, Wiro J. Niessen
2010 B conf
Fully automatic cardiac segmentation from 3D CTA data: a multi-atlas based approach.
Image Processing
Hortense A. Kirisli, Michiel Schaap, Stefan Klein, Lisan Neefjes, Annick C. Weustink, Theo van Walsum, Wiro J. Niessen
2010 B conf
Intracranial aneurysm segmentation in 3D CT angiography: method and quantitative validation.
Image Processing
Azadeh Firouzian, Rashindra Manniesing, Zwenneke H. Flach, Roelof Risselada, Fop van Kooten, Miriam C. J. M. Sturkenboom, Aad van der Lugt, Wiro J. Niessen
2010 J jnl
Microtubule Dynamics Analysis Using Kymographs and Variable-Rate Particle Filters.
IEEE Trans. Image Process.
Ihor Smal, Ilya Grigoriev, Anna Akhmanova, Wiro J. Niessen, Erik Meijering
2010 J jnl
Motion compensated iterative reconstruction of a region of interest in cardiac cone-beam CT.
Comput. Medical Imaging Graph.
Alfonso A. Isola, A. Ziegler, Dirk Schäfer, Thomas Köhler, Wiro J. Niessen, Michael Grass
2010 — conf
Nonrigid Registration and Template Matching for Coronary Motion Modeling from 4D CTA.
WBIR
Dong Ping Zhang, Laurent Risser, Ola Friman, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert
2010 — conf
Particle filtering methods for motion analysis in tagged MRI.
ISBI
Ihor Smal, Wiro J. Niessen, Erik Meijering
2010 — conf
Prediction of Dementia by Hippocampal Shape Analysis.
MLMI
Hakim C. Achterberg, Fedde van der Lijn, Tom den Heijer, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen, Marleen de Bruijne
2010 J jnl
Quantitative Comparison of Spot Detection Methods in Fluorescence Microscopy.
IEEE Trans. Medical Imaging
Ihor Smal, Marco Loog, Wiro J. Niessen, Erik Meijering
2010 J jnl
Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population.
Medical Image Anal.
Rashindra Manniesing, Michiel Schaap, Sietske Rozie, Reinhard Hameeteman, Danijela Vukadinovic, Aad van der Lugt, Wiro J. Niessen
2010 J jnl
Segmentation of the Outer Vessel Wall of the Common Carotid Artery in CTA.
IEEE Trans. Medical Imaging
Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Sietske Rozie, Reinhard Hameeteman, Thomas de Weert, Aad van der Lugt, Wiro J. Niessen
2009 — conf
Carotid Artery Segmentation and Plaque Quantification in CTA.
ISBI
Danijela Vukadinovic, Theo van Walsum, Sietske Rozie, Thomas de Weert, Rashindra Manniesing, Aad van der Lugt, Wiro J. Niessen
2009 — conf
Cerebellum Segmentation in MRI Using Atlas Registration and Local Multi-Scale Image Descriptors.
ISBI
Fedde van der Lijn, Marleen de Bruijne, Yoo Young Hoogendam, Stefan Klein, Reinhard Hameeteman, Monique M. B. Breteler, Wiro J. Niessen
2009 — conf
Coronary Lumen Segmentation Using Graph Cuts and Robust Kernel Regression.
IPMI
Michiel Schaap, Lisan Neefjes, Coert Metz, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Jolanda J. Wentzel, Theo van Walsum, Wiro J. Niessen
2009 J jnl
Editorial.
Int. J. Comput. Vis.
Mads Nielsen, Wiro J. Niessen, Carl-Fredrik Westin
2009 — conf
Energy Minimization Methods for Cell Motion Correction and Intracellular Analysis in Live-Cell Fluorescence Microscopy.
ISBI
Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering
2009 — conf
GPU Accelerated Alignment of 3-D CTA with 2-D X-Ray Data for Improved Guidance in Coronary Interventions.
ISBI
Coert Metz, Michiel Schaap, Stefan Klein, Annick C. Weustink, Nico Mollet, Carl J. Schultz, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum, Wiro J. Niessen
2009 — conf
Integrating Biological Knowledge, Novel Imaging Modalities, and Modeling in Breast Cancer Diagnosis.
ISBI
Nico Karssemeijer, Henkjan J. Huisman, David J. Hawkes, John H. Hipwell, Tobias Böhler, Jan M. Lesniak, Christine Tanner, Gábor Székely, Wiro J. Niessen, Horst K. Hahn
2009 — conf
Iterative Co-linearity Filtering and Parameterization of Fiber Tracts in the Entire Cingulum.
MICCAI (1)
Marius de Groot, Meike W. Vernooij, Stefan Klein, Alexander Leemans, Renske de Boer, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen
2009 — conf
Patient Specific 4D Coronary Models from ECG-gated CTA Data for Intra-operative Dynamic Alignment of CTA with X-ray Images.
MICCAI (1)
Coert Metz, Michiel Schaap, Stefan Klein, Lisan Neefjes, Ermanno Capuano, Carl J. Schultz, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum, Wiro J. Niessen
2009 — conf
Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging.
ISBI
Ihor Smal, Marco Loog, Wiro J. Niessen, Erik Meijering
2009 J jnl
Selective Deblurring for Improved Calcification Visualization and Quantification in Carotid CT Angiography: Validation Using Micro-CT.
IEEE Trans. Medical Imaging
Empar Rollano-Hijarrubia, Rashindra Manniesing, Wiro J. Niessen
2009 J jnl
Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms.
Medical Image Anal.
Michiel Schaap, Coert Metz, Theo van Walsum, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic, Carlos Castro-Gonzalez, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz, Maciej Orkisz, Örjan Smedby, Martin Styner, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen
2009 J jnl
White matter lesion extension to automatic brain tissue segmentation on MRI.
NeuroImage
Renske de Boer, Henri A. Vrooman, Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen
2008 — conf
A new detection scheme for multiple object tracking in fluorescence microscopy by joint probabilistic data association filtering.
ISBI
Ihor Smal, Wiro J. Niessen, Erik Meijering
2008 B conf
AdaBoost classification for model-based segmentation of the outer wall of the common carotid artery in CTA.
Image Processing
Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Aad van der Lugt, Thomas de Weert, Wiro J. Niessen
2008 — conf
Advanced level-set based multiple-cell segmentation and tracking in time-lapse fluorescence microscopy images.
ISBI
Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering
2008 — conf
Averaging Centerlines: Mean Shift on Paths.
MICCAI (1)
Theo van Walsum, Michiel Schaap, Coert Metz, Alina G. van der Giessen, Wiro J. Niessen
2008 J jnl
Fast Noise Reduction in Computed Tomography for Improved 3-D Visualization.
IEEE Trans. Medical Imaging
Michiel Schaap, Arnold M. R. Schilham, Karel J. Zuiderveld, Mathias Prokop, Evert-Jan Vonken, Wiro J. Niessen
2008 J jnl
Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts.
NeuroImage
Fedde van der Lijn, Tom den Heijer, Monique M. B. Breteler, Wiro J. Niessen
2008 J jnl
Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering.
Medical Image Anal.
Ihor Smal, Erik Meijering, Katharina Draegestein, Niels Galjart, Ilya Grigoriev, Anna Akhmanova, M. E. van Royen, Adriaan B. Houtsmuller, Wiro J. Niessen
2008 J jnl
Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images: Application to Microtubule Growth Analysis.
IEEE Trans. Medical Imaging
Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen, Erik Meijering
2008 — ed.
Proceedings of the Eurographics Workshop on Visual Computing for Biomedicine, VCBM 2008, Delft, The Netherlands, 2008.
VCBM
Charl P. Botha, Gordon L. Kindlmann, Wiro J. Niessen, Bernhard Preim
2008 B conf
Volume preserving image registration via a post-processing stage.
Image Processing
Reinhard Hameeteman, Jifke F. Veenland, Wiro J. Niessen
2008 J jnl
White matter atrophy and lesion formation explain the loss of structural integrity of white matter in aging.
NeuroImage
Meike W. Vernooij, Marius de Groot, Aad van der Lugt, Mohammad Arfan Ikram, Gabriel P. Krestin, Albert Hofman, Wiro J. Niessen, Monique M. B. Breteler
2007 — conf
3d X-Ray Image Guidance in Interventional Radiology.
ISBI
Wiro J. Niessen, Everine B. van de Kraats, Shirley A. M. Baert, Theo van Walsum
2007 — conf
A Variational Model for Level-set Based Cell Tracking in Time-lapse Fluorescence Microscopy Images.
ISBI
Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering
2007 — conf
Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images.
ISBI
Ihor Smal, Wiro J. Niessen, Erik Meijering
2007 B conf
Automated localization of periventricular and subcortical white matter lesions.
Image Processing
Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Henri A. Vrooman, Daniel Rueckert, Alexander Hammers, Monique M. B. Breteler, Wiro J. Niessen
2007 — conf
Automatic Segmentation of Brain Tissue Andwhitematter Lesions in MRI.
ISBI
Renske de Boer, Fedde van der Lijn, Henri A. Vrooman, Meike W. Vernooij, Mohammad Arfan Ikram, Monique M. B. Breteler, Wiro J. Niessen
2007 B conf
Automatic segmentation of the internal carotid arteries through the skull base.
Image Processing
Rashindra Manniesing, Wiro J. Niessen
2007 — conf
Bayesian Tracking of Elongated Structures in 3D Images.
IPMI
Michiel Schaap, Ihor Smal, Coert Metz, Theo van Walsum, Wiro J. Niessen
2007 — conf
Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA.
MICCAI (2)
Michiel Schaap, Rashindra Manniesing, Ihor Smal, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen
2007 J jnl
Modeling Friction, Intrinsic Curvature, and Rotation of Guide Wires for Simulation of Minimally Invasive Vascular Interventions.
IEEE Trans. Biomed. Eng.
Tanja Alderliesten, Maurits K. Konings, Wiro J. Niessen
2007 J jnl
Multi-spectral brain tissue segmentation using automatically trained k-Nearest-Neighbor classification.
NeuroImage
Henri A. Vrooman, Chris A. Cocosco, Fedde van der Lijn, Rik Stokking, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen
2007 — conf
Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging.
IPMI
Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen, Erik Meijering
2007 — conf
Semi-Automatic Coronary Artery Centerline Extraction in Computed Tomography Angiography Data.
ISBI
Coert Metz, Michiel Schaap, Alina G. van der Giessen, Theo van Walsum, Wiro J. Niessen
2007 J jnl
Towards a Real-Time Minimally-Invasive Vascular Intervention Simulation System.
IEEE Trans. Medical Imaging
Tanja Alderliesten, Peter A. N. Bosman, Wiro J. Niessen
2007 J jnl
Vessel Axis Tracking Using Topology Constrained Surface Evolution.
IEEE Trans. Medical Imaging
Rashindra Manniesing, Max A. Viergever, Wiro J. Niessen
2006 J jnl
Accuracy evaluation of direct navigation with an isocentric 3D rotational X-ray system.
Medical Image Anal.
Everine B. van de Kraats, Theo van Walsum, Lance Kendrick, Niels J. Noordhoek, Wiro J. Niessen
2006 B conf
Automatic cardiac MRI myocardium segmentation using graphcut.
Image Processing
Gunnar Kedenburg, Chris A. Cocosco, Ullrich Köthe, Wiro J. Niessen, Evert-Jan Vonken, Max A. Viergever
2006 — conf
Bayesian tracking for fluorescence microscopic imaging.
ISBI
Ihor Smal, Wiro J. Niessen, Erik Meijering
2006 J jnl
Level set based cerebral vasculature segmentation and diameter quantification in CT angiography.
Medical Image Anal.
Rashindra Manniesing, Birgitta K. Velthuis, Maarten S. van Leeuwen, Irene C. van der Schaaf, Peter Jan van Laar, Wiro J. Niessen
2006 — conf
Quantification of heterogeneity in dynamic contrast enhanced MRI data for tumor treatment assessment.
ISBI
Lejla Alic, Jifke F. Veenland, Marion van Vliet, C. F. van Dijke, A. M. M. Eggermont, Wiro J. Niessen
2006 J jnl
Quantitative Evaluation of Three Calibration Methods for 3-D Freehand Ultrasound.
IEEE Trans. Medical Imaging
François Rousseau, Pierre Hellier, Marloes M. J. Letteboer, Wiro J. Niessen, Christian Barillot
2006 — conf
Shape constrained vessel centerline extraction by integrating surface evolution and topology analysis.
ISBI
Rashindra Manniesing, Wiro J. Niessen
2006 J jnl
Vessel enhancing diffusion: A scale space representation of vessel structures.
Medical Image Anal.
Rashindra Manniesing, Max A. Viergever, Wiro J. Niessen
2006 B conf
kNN-based multi-spectral MRI brain tissue classification: manual training versus automated atlas-based training.
Image Processing
Henri A. Vrooman, Chris A. Cocosco, Rik Stokking, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen
2005 J jnl
Brain shift estimation in image-guided neurosurgery using 3-D ultrasound.
IEEE Trans. Biomed. Eng.
Marloes Maria Johanna Letteboer, Peter W. A. Willems, Max A. Viergever, Wiro J. Niessen
2005 J jnl
Guide wire reconstruction and visualization in 3DRA using monoplane fluoroscopic imaging.
IEEE Trans. Medical Imaging
Theo van Walsum, Shirley A. M. Baert, Wiro J. Niessen
2005 — conf
Multiscale Vessel Enhancing Diffusion in CT Angiography Noise Filtering.
IPMI
Rashindra Manniesing, Wiro J. Niessen
2005 — conf
Multispectral MR to X-Ray Registration of Vertebral Bodies by Generating CT-Like Data.
MICCAI (2)
Everine B. van de Kraats, Graeme P. Penney, Theo van Walsum, Wiro J. Niessen
2005 J jnl
Segmentation of thrombus in abdominal aortic aneurysms from CTA with nonparametric statistical grey level appearance modeling.
IEEE Trans. Medical Imaging
Sílvia Delgado Olabarriaga, Jean-Michel Rouet, Maxim Fradkin, Marcel Breeuwer, Wiro J. Niessen
2005 J jnl
Standardized evaluation methodology for 2-D-3-D registration.
IEEE Trans. Medical Imaging
Everine B. van de Kraats, Graeme P. Penney, Dejan Tomazevic, Theo van Walsum, Wiro J. Niessen
2004 B conf
3D coronary reconstruction from calibrated motion-compensated 2D projections based on semi-automated feature point detection.
Image Processing
Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen
2004 — conf
3D guide wire tracking for navigation in endovascular interventions.
Image-Guided Procedures
Shirley A. M. Baert, Theo van Walsum, Wiro J. Niessen
2004 J jnl
A quantitative analysis of 3-D coronary modeling from two or more projection images.
IEEE Trans. Medical Imaging
Babak Movassaghi, Volker Rasche, Michael Grass, Max A. Viergever, Wiro J. Niessen
2004 — conf
Accuracy of Navigation on 3DRX Data Acquired with a Mobile Propeller C-Arm.
MICCAI (2)
Theo van Walsum, Everine B. van de Kraats, Bart Carelsen, Sjirk N. Boon, Niels J. Noordhoek, Wiro J. Niessen
2004 B conf
Accurate coronary modeling procedure using 2D calibrated projections based on 2D centerline points on a single projection.
Image Processing
Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen
2004 J jnl
Automated segmentation of the left ventricle in cardiac MRI.
Medical Image Anal.
Michael Kaus, Jens von Berg, Jürgen Weese, Wiro J. Niessen, Vladimir Pekar
2004 — conf
Automatic cardiac region-of-interest computation in cine 3D structural MRI.
CARS
Chris A. Cocosco, Thomas Netsch, Julien Sénégas, Daniel Bystrov, Wiro J. Niessen, Max A. Viergever
2004 J jnl
Construction and evaluation of an average CT brain image for inter-subject registration.
Comput. Biol. Medicine
Cynthia Jongen, Josien P. W. Pluim, Paul H. J. Nederkoorn, Max A. Viergever, Wiro J. Niessen
2004 J jnl
Interactive segmentation of abdominal aortic aneurysms in CTA images.
Medical Image Anal.
Marleen de Bruijne, Bram van Ginneken, Max A. Viergever, Wiro J. Niessen
2004 — conf
Local Speed Functions in Level Set Based Vessel Segmentation.
MICCAI (1)
Rashindra Manniesing, Wiro J. Niessen
2004 — conf
Multi-scale Statistical Grey Value Modelling for Thrombus Segmentation from CTA.
MICCAI (1)
Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen
2004 J jnl
Multiscale vessel tracking.
IEEE Trans. Medical Imaging
Onno Wink, Wiro J. Niessen, Max A. Viergever
2004 — conf
Precalibration Versus 2D-3D Registration for 3D Guide Wire Display in Endovascular Interventions.
MICCAI (2)
Shirley A. M. Baert, Graeme P. Penney, Theo van Walsum, Wiro J. Niessen
2004 — conf
Registration-Based Interpolation Using a High-Resolution Image for Guidance.
MICCAI (1)
Graeme P. Penney, Julia A. Schnabel, Daniel Rueckert, David J. Hawkes, Wiro J. Niessen
2004 J jnl
Registration-based interpolation.
IEEE Trans. Medical Imaging
Graeme P. Penney, Julia A. Schnabel, Daniel Rueckert, Max A. Viergever, Wiro J. Niessen
2004 — conf
Segmentation of Abdominal Aortic Aneurysms with a Non-parametric Appearance Model.
ECCV Workshops CVAMIA and MMBIA
Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen
2004 B conf
Semi-automatic segmentation and quantification of the internal carotid artery from 3D contrast-enhanced MR angiograms.
Image Processing
Cornelis M. van Bemmel, Wiro J. Niessen
2004 B conf
Skeletonization for reinitialization in level-set-based vascular tree segmentation.
Image Processing
Rashindra Manniesing, Birgitta K. Velthuis, Maarten S. van Leeuwen, Wiro J. Niessen
2004 — conf
Standardized Evaluation of 2D-3D Registration.
MICCAI (1)
Everine B. van de Kraats, Graeme P. Penney, Dejan Tomazevic, Theo van Walsum, Wiro J. Niessen
2004 — conf
Three-Dimensional Reconstruction of Tracked Freehand Ultrasound Using Non-Rigid Registration.
ISBI
Graeme P. Penney, Krista Joosten, Marloes M. J. Letteboer, Max A. Viergever, Wiro J. Niessen
2003 J jnl
3D Guide Wire Reconstruction from Biplane Image Sequence for Integrated Display fin 3D Vasculature.
IEEE Trans. Medical Imaging
Shirley A. M. Baert, Everine B. van de Kraats, Theo van Walsum, Max A. Viergever, Wiro J. Niessen
2003 — conf
3D coronary reconstruction from calibrated motion-compensated 2D projections.
CARS
Babak Movassaghi, Volker Rasche, Raoul Florent, Max A. Viergever, Wiro J. Niessen
2003 — conf
Adapting Active Shape Models for 3D Segmentation of Tubular Structures in Medical Images.
IPMI
Marleen de Bruijne, Bram van Ginneken, Max A. Viergever, Wiro J. Niessen
2003 — conf
Automated Segmentation of Abdominal Aortic Aneurysms in Multi-spectral MR Images.
MICCAI (2)
Marleen de Bruijne, Bram van Ginneken, Lambertus W. Bartels, Maarten J. van der Laan, Jan D. Blankensteijn, Wiro J. Niessen, Max A. Viergever
2003 — conf
Automated Segmentation of the Left Ventricle in Cardiac MRI.
MICCAI (1)
Michael Kaus, Jens von Berg, Wiro J. Niessen, Vladimir Pekar
2003 — conf
Automatic Construction of Biventricular Statistical Shape Models.
FIMH
Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen
2003 J jnl
Blood Pool Contrast Enhanced MRA: Improved Arterial Visualization in the Steady State.
IEEE Trans. Medical Imaging
Cornelis M. van Bemmel, Onno Wink, Bert Verdonck, Max A. Viergever, Wiro J. Niessen
2003 B conf
Coupled deformable models with spatially varying features for quantitative assessment of left ventricular function from cardiac MRI.
Image Processing
Kirsten Meetz, Jens von Berg, Thomas Netsch, Vladimir Pekar, Steven Lobregt, Roel Truyen, Miriam Siers, Wiro J. Niessen, Michael R. Kaus
2003 — conf
Evaluation of Hessian-based filters to enhance the axis of coronary arteries in CT images.
CARS
Sílvia Delgado Olabarriaga, Wiro J. Niessen, Marcel Breeuwer
2003 J jnl
Growth and Motion in Three-Dimensional Images.
IEEE Trans. Medical Imaging
Jon Sporring, Wiro J. Niessen, Joachim Weickert
2003 J jnl
Guide Wire Tracking During Endovascular Interventions.
IEEE Trans. Medical Imaging
Shirley A. M. Baert, Max A. Viergever, Wiro J. Niessen
2003 J jnl
Level-Set Based Artery-Vein Separation in Blood Pool Agent CE-MR Angiograms.
IEEE Trans. Medical Imaging
Cornelis M. van Bemmel, Luuk J. Spreeuwers, Max A. Viergever, Wiro J. Niessen
2003 J jnl
Localization and Segmentation of Aortic Endografts using Marker Detection.
IEEE Trans. Medical Imaging
Marleen de Bruijne, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever
2003 — conf
Minimum Cost Path Algorithm for Coronary Artery Central Axis Tracking in CT Images.
MICCAI (2)
Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen
2003 B conf
Model-based segmentation of abdominal aortic aneurysms in CTA images.
Image Processing
Marleen de Bruijne, Bram van Ginneken, Wiro J. Niessen, Marco Loog, Max A. Viergever
2003 — conf
Non-ECG gated 3D-rotational coronary angiography.
CARS
Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen
2003 — conf
Non-rigid Registration of 3D Ultrasound Images of Brain Tumours Acquired during Neurosurgery.
MICCAI (2)
Marloes M. J. Letteboer, Peter W. A. Willems, Max A. Viergever, Wiro J. Niessen
2003 B conf
Noninvasive MR to 3D Rotational x-ray registration of vetebral bodies.
Image Processing
Everine Brenda van de Kraats, Theo van Walsum, Jorrit-Jan Verlaan, Wiro J. Niessen
2003 — conf
Rigid registration of 3D ultrasound data of brain tumours.
CARS
Marloes M. J. Letteboer, Max A. Viergever, Wiro J. Niessen
2003 — conf
Three-dimensional guide wire visualization from 3DRA using monoplane fluoroscopic imaging.
Image-Guided Procedures
Theo van Walsum, Shirley A. M. Baert, Wiro J. Niessen
2002 — conf
2D Guide Wire Tracking during Endovascular Interventions.
MICCAI (2)
Shirley A. M. Baert, Wiro J. Niessen
2002 — conf
3D Guide Wire Reconstruction from Biplane Image Sequences for 3D Navigation in Endovascular Interventions.
MICCAI (1)
Shirley A. M. Baert, Everine B. van de Kraats, Wiro J. Niessen
2002 B conf
Active-shape-model-based segmentation of abdominal aortic aneurysms in CTA images.
Image Processing
Marleen de Bruijne, Bram van Ginneken, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever
2002 J jnl
Automatic Construction of Multiple-object Three-dimensional Statistical Shape Models: Application to Cardiac Modelling.
IEEE Trans. Medical Imaging
Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen
2002 B conf
Blood pool agent contrast-enhanced MRA: level-set-based artery-vein separation.
Image Processing
Cornelis M. van Bemmel, Luuk J. Spreeuwers, Bert Verdonck, Max A. Viergever, Wiro J. Niessen
2002 J jnl
Diffusion-enhanced visualization and quantification of vascular anomalies in three-dimensional rotational angiography: Results of an in-vitro evaluation.
Medical Image Anal.
Erik Meijering, Wiro J. Niessen, Joachim Weickert, Max A. Viergever
2002 — conf
Level-Set Based Carotid Artery Segmentation for Stenosis Grading.
MICCAI (2)
Cornelis M. van Bemmel, Luuk J. Spreeuwers, Max A. Viergever, Wiro J. Niessen
2002 — conf
Model-based segmentation of cardiac and vascular images.
ISBI
Wiro J. Niessen, Cornelis M. van Bemmel, Alejandro F. Frangi, M. J. A. Siers, Onno Wink
2002 — conf
Simulation of Guide Wire Propagation for Minimally Invasive Vascular Interventions.
MICCAI (2)
Tanja Alderliesten, Maurits K. Konings, Wiro J. Niessen
2001 — conf
Automatic 3D ASM Construction via Atlas-Based Landmarking and Volumetric Elastic Registration.
IPMI
Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen
2001 A conf
Blood Pool Agent CE-MRA: Improved Arterial Visualization of the Aortoiliac Vasculature in the Steady-State Using First-Pass Data.
MICCAI
Cornelis M. van Bemmel, Wiro J. Niessen, Onno Wink, Bert Verdonck, Max A. Viergever
2001 J jnl
Bone tumor segmentation from MR perfusion images with neural networks using multi-scale pharmacokinetic features.
Image Vis. Comput.
Alejandro F. Frangi, Michael Egmont-Petersen, Wiro J. Niessen, Johan H. C. Reiber, Max A. Viergever
2001 A conf
Evaluation of Diffusion Techniques for Improved Vessel Visualization and Quantification in Three-Dimensional Rotational Angiography.
MICCAI
Erik Meijering, Wiro J. Niessen, Joachim Weickert, Max A. Viergever
2001 J jnl
Geometric Partial Differential Equations and Image Analysis.
IEEE Trans. Medical Imaging
Wiro J. Niessen
2001 A ed.
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001, 4th International Conference, Utrecht, The Netherlands, October 14-17, 2001, Proceedings
MICCAI
Wiro J. Niessen, Max A. Viergever
2001 B conf
Objective and reproducible segmentation and quantification of tuberous sclerosis lesions in FLAIR brain MR images.
Image Processing
Tanja Alderliesten, Wiro J. Niessen, Koen L. Vincken, J. B. Antoine Maintz, Floor Jansen, Onno van Nieuwenhuizen, Max A. Viergever
2001 J jnl
Quantitative evaluation of convolution-based methods for medical image interpolation.
Medical Image Anal.
Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever
2001 B conf
Semiautomatic aortic endograft localization for postoperative evaluation of endovascular aneurysm treatment.
Image Processing
Marleen de Bruijne, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever
2001 J jnl
Three-Dimensional Modeling for Functional Analysis of Cardiac Images: A Review.
IEEE Trans. Medical Imaging
Alejandro F. Frangi, Wiro J. Niessen, Max A. Viergever
2001 A conf
Vessel Axis Determination Using Wave Front Propagation Analysis.
MICCAI
Onno Wink, Wiro J. Niessen, Bert Verdonck, Max A. Viergever
2000 J jnl
Fast Delineation and Visualization of Vessels in 3D Angiographic Images.
IEEE Trans. Medical Imaging
Onno Wink, Wiro J. Niessen, Max A. Viergever
2000 A conf
Guide Wire Tracking During Endovascular Interventions.
MICCAI
Shirley A. M. Baert, Wiro J. Niessen, Erik H. W. Meijering, Alejandro F. Frangi, Max A. Viergever
2000 B conf
Minimum Cost Path Determination Using a Simple Heuristic Function.
ICPR
Onno Wink, Wiro J. Niessen, Max A. Viergever
2000 J jnl
Objective Quantifications of the Motion of Orbital Soft Tissues.
IEEE Trans. Medical Imaging
Michael Abramoff, Wiro J. Niessen, Max A. Viergever
2000 B conf
Segmentation of Bone Tumor in MR Perfusion Images Using Neural Networks and Multiscale Pharmacokinetic Features.
ICPR
Michael Egmont-Petersen, Alejandro F. Frangi, Wiro J. Niessen, P. C. W. Hogendoorn, Johan L. Bloem, Max A. Viergever, Johan H. C. Reiber
2000 — conf
Vascular Image Processing.
SIBGRAPI
Wiro J. Niessen
1999 — conf
A Fast Image Registration Technique for Motion Artifact Reduction in DSA.
ICIP (3)
Erik H. W. Meijering, Karel J. Zuiderveld, Wiro J. Niessen, Max A. Viergever
1999 J jnl
Binocular Stereo from Grey-Scale Images.
J. Math. Imaging Vis.
Mads Nielsen, Robert Maas, Wiro J. Niessen, Luc Florack, Bart M. ter Haar Romeny
1999 — conf
Enhanced Artery Visualization in Blood Pool MRA: Results in the Peripheral Vasculature.
IPMI
Wiro J. Niessen, Alexander Montauban van Swijndregt, Bernard Elsman, Onno Wink, Max A. Viergever, Willem Mali
1999 J jnl
Model-Based Quantitation of 3D Magnetic Resonance Angiographic Images.
IEEE Trans. Medical Imaging
Alejandro F. Frangi, Wiro J. Niessen, Romhild M. Hoogeveen, Theo van Walsum, Max A. Viergever
1999 J jnl
Multiscale Segmentation of Three-Dimensional MR Brain Images.
Int. J. Comput. Vis.
Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Bart M. ter Haar Romeny, Max A. Viergever
1999 — conf
Piecewise Polynomial Kernels for Image Interpolation: A Generalization of Cubic Convolution.
ICIP (3)
Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever
1999 J jnl
Pseudo-Linear Scale-Space Theory.
Int. J. Comput. Vis.
Luc Florack, Robert Maas, Wiro J. Niessen
1999 A conf
Quantitation of Vessel Morphology from 3D MRA.
MICCAI
Alejandro F. Frangi, Wiro J. Niessen, Romhild M. Hoogeveen, Theo van Walsum, Max A. Viergever
1999 A conf
Quantitative Comparison of Sinc-Approximating Kernels for Medical Image Interpolation.
MICCAI
Erik H. W. Meijering, Wiro J. Niessen, Josien P. W. Pluim, Max A. Viergever
1999 J jnl
Retrospective Motion Correction in Digital Subtraction Angiography: A Review.
IEEE Trans. Medical Imaging
Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever
1999 — conf
The Sinc-Approximating Kernels of Classical Polynomial Interpolation.
ICIP (3)
Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever
1998 — conf
Error Metrics for Quantitative Evaluation of Medical Image Segmentation.
Theoretical Foundations of Computer Vision
Wiro J. Niessen, Carolien J. Bouma, Koen L. Vincken, Max A. Viergever
1998 A conf
Fast Quantification of Abdominal Aortic Aneurysms from CTA Volumes.
MICCAI
Onno Wink, Wiro J. Niessen, Max A. Viergever
1998 J jnl
Geodesic Deformable Models for Medical Image Analysis.
IEEE Trans. Medical Imaging
Wiro J. Niessen, Bart M. ter Haar Romeny, Max A. Viergever
1998 A conf
Muliscale Vessel Enhancement Filtering.
MICCAI
Alejandro F. Frangi, Wiro J. Niessen, Koen L. Vincken, Max A. Viergever
1998 J jnl
The Intrinsic Structure of Optic Flow Incorporating Measurement Duality.
Int. J. Comput. Vis.
Luc Florack, Wiro J. Niessen, Mads Nielsen
1998 A* conf
Three Dimensional MR Brain Segmentation.
ICCV
Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Max A. Viergever
1997 J jnl
A General Framework for Geometry-Driven Evolution Equations.
Int. J. Comput. Vis.
Wiro J. Niessen, Bart M. ter Haar Romeny, Luc Florack, Max A. Viergever
1997 J jnl
Automated lumen definition from 30 MHz intravascular ultrasound images.
Medical Image Anal.
Carolien J. Bouma, Wiro J. Niessen, Karel J. Zuiderveld, Elma J. Gussenhoven, Max A. Viergever
1997 — conf
In Vivo Analysis of Trabecular Bone Architecture.
IPMI
Wiro J. Niessen, A. M. López, W. J. van Enk, P. M. v. Roermund, Bart M. ter Haar Romeny, Max A. Viergever
1997 J jnl
Multiscale Approach to Image Sequence Analysis.
Comput. Vis. Image Underst.
Wiro J. Niessen, James S. Duncan, Mads Nielsen, Luc Florack, Bart M. ter Haar Romeny, Max A. Viergever
1997 J jnl
Nonlinear Multiscale Representations for Image Segmentation.
Comput. Vis. Image Underst.
Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Max A. Viergever
1997 — conf
On the Duality of Scalar and Density Flows.
Scale-Space
Mads Nielsen, Wiro J. Niessen, Robert Maas, Luc Florack, Bart M. ter Haar Romeny
1997 — ch.
Optic Flow and Stereo.
Gaussian Scale-Space Theory
Wiro J. Niessen, Robert Maas
1997 — conf
Parallel Implementations of AOS Schemes: A Fast Way of Nonlinear Diffusion Filtering.
ICIP (3)
Joachim Weickert, Karel J. Zuiderveld, Bart M. ter Haar Romeny, Wiro J. Niessen
1997 — conf
Supervised Diffusion Parameter Selection for Filtering SPECT Brain Images.
Scale-Space
Freek J. Beekman, Ed T. P. Slijpen, Wiro J. Niessen
1996 A* conf
Blurring Strategies for Image Segmentation Using a Multiscale Linking Model.
CVPR
Koen L. Vincken, Wiro J. Niessen, Max A. Viergever
1996 — conf
Evaluation of Segmentation Algorithms for Intravascular Ultrasound Images.
VBC
Carolien J. Bouma, Wiro J. Niessen, Karel J. Zuiderveld, Elma J. Gussenhoven, Max A. Viergever
1994 — conf
Differatial Structure of Images: Accuracy of Representation.
ICIP (1)
Bart M. ter Haar Romeny, Wiro J. Niessen, Janita Wilting, Luc Florack
1994 A* conf
Nonlinear diffusion of scalar images using well-posed differential operators.
CVPR
Wiro J. Niessen, Bart M. ter Haar Romeny, Luc Florack, Alfons H. Salden, Max A. Viergever
1994 — ch.
Numerical Analysis of Geometry-Driven Diffusion Equations.
Geometry-Driven Diffusion in Computer Vision
Wiro J. Niessen, Bart M. ter Haar Romeny, Max A. Viergever