William R. Jarnagin

29 papers B 1Journal 10Unranked 18

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Comparing the Effects of Persistence Barcodes Aggregation and Feature Concatenation on Medical Imaging. CoRR Dashti A. Ali, Richard K. G. Do, William R. Jarnagin, Aras T. Asaad, Amber L. Simpson
2025	J	`jnl`	Multimodal machine learning models enhance outcome prediction in intrahepatic cholangiocarcinoma. Comput. Biol. Medicine Eliott Brion, Valérie Ducret, Naaz Nasar, Benoît Sauty, Sarah McIntyre, Remo Alessandris, Carlie S. Sigel, Mala Jain, Umeshkumar K. Bhanot, Jordana Ray-Kirton, Joachim Silber, Caroline Hoffmann, Charles Maussion, Jayasree Chakraborty, Benoit Schmauch, William R. Jarnagin
2024	J	`jnl`	Comparing regularized Kelvinlet functions and the finite element method for registration of medical images to sparse organ data. Medical Image Anal. Morgan J. Ringel, Jon S. Heiselman, Winona L. Richey, Ingrid M. Meszoely, William R. Jarnagin, Michael I. Miga
2023	—	`conf`	Comparison study of intraoperative surface acquisition methods for surgical navigation. Image-Guided Procedures Bowen Xiang, Jon S. Heiselman, Winona L. Richey, William R. Jarnagin, Michael I. Miga
2023	—	`conf`	Comparison study of sparse data-driven soft tissue registration: preliminary results from the image-to-physical liver registration sparse data challenge. Image-Guided Procedures Jon S. Heiselman, Jarrod A. Collins, Morgan J. Ringel, William R. Jarnagin, Michael I. Miga
2023	J	`jnl`	Computerized Diagnosis of Liver Tumors From CT Scans Using a Deep Neural Network Approach. IEEE J. Biomed. Health Informatics Abhishek Midya, Jayasree Chakraborty, Rami Srouji, Raja R. Narayan, Thomas Börner, Jian Zheng, Linda M. Pak, John M. Creasy, Luz A. Escobar, Kate A. Harrington, Mithat Gönen, Michael I. D'Angelica, T. Peter Kingham, Richard K. G. Do, William R. Jarnagin, Amber L. Simpson
2023	—	`conf`	Leveraging Contrastive Learning with SimSiam for the Classification of Primary and Secondary Liver Cancers. MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI Ramtin Mojtahedi, Mohammad Hamghalam, William R. Jarnagin, Richard K. G. Do, Amber L. Simpson
2022	—	`conf`	CT radiomics to predict early hepatic recurrence after resection for intrahepatic cholangiocarcinoma. Computer-Aided Diagnosis Jayasree Chakraborty, Joshua S. Jolissaint, Tiegong Wang, Kevin C. Soares, Mithat Gonen, Linda M. Pak, Thomas Börner, Richard K. G. Do, Vinod P. Balachandran, Michael I. D'Angelica, Jeffrey A. Drebin, T. Peter Kingham, Alice C. Wei, William R. Jarnagin
2022	—	`conf`	Registration uncertainty in deforming organs: a novel approach for ensuring navigational confidence during image-guided procedures. Image-Guided Procedures Jon S. Heiselman, William R. Jarnagin, Michael I. Miga
2021	J	`jnl`	The Medical Segmentation Decathlon. CoRR Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbeláez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso
2020	—	`conf`	A combined radiomics and cyst fluid inflammatory markers model to predict preoperative risk in pancreatic cystic lesions. Image-Guided Procedures Travis L. Williams, Kate A. Harrington, Sharon A. Lawrence, Jayasree Chakraborty, Mohammad A. Al Efishat, Marc A. Attiyeh, Gokce Askan, Yuting Chou, Alessandra Pulvirenti, Caitlin A. McIntyre, Mithat Gonen, Olca Basturk, Vinod P. Balachandran, T. Peter Kingham, Michael I. D'Angelica, William R. Jarnagin, Jeffrey A. Drebin, Richard K. G. Do, Peter J. Allen, Amber L. Simpson
2020	J	`jnl`	Intraoperative Correction of Liver Deformation Using Sparse Surface and Vascular Features via Linearized Iterative Boundary Reconstruction. IEEE Trans. Medical Imaging Jon S. Heiselman, William R. Jarnagin, Michael I. Miga
2019	J	`jnl`	A large annotated medical image dataset for the development and evaluation of segmentation algorithms. CoRR Amber L. Simpson, Michela Antonelli, Spyridon Bakas, Michel Bilello, Keyvan Farahani, Bram van Ginneken, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Jennifer Golia-Pernicka, Stephan Heckers, William R. Jarnagin, Maureen McHugo, Sandy Napel, Eugene Vorontsov, Lena Maier-Hein, M. Jorge Cardoso
2019	J	`jnl`	Towards Unsupervised Cancer Subtyping: Predicting Prognosis Using A Histologic Visual Dictionary. CoRR Hassan Muhammad, Carlie S. Sigel, Gabriele Campanella, Thomas Börner, Linda M. Pak, Stefan Büttner, Jan N. M. IJzermans, Bas Groot Koerkamp, Michael Doukas, William R. Jarnagin, Amber L. Simpson, Thomas J. Fuchs
2019	—	`conf`	Unsupervised Subtyping of Cholangiocarcinoma Using a Deep Clustering Convolutional Autoencoder. MICCAI (1) Hassan Muhammad, Carlie S. Sigel, Gabriele Campanella, Thomas Börner, Linda M. Pak, Stefan Büttner, Jan N. M. IJzermans, Bas Groot Koerkamp, Michael Doukas, William R. Jarnagin, Amber L. Simpson, Thomas J. Fuchs
2018	—	`conf`	Deep convolutional neural network for the classification of hepatocellular carcinoma and intrahepatic cholangiocarcinoma. Computer-Aided Diagnosis Abhishek Midya, Jayasree Chakraborty, Linda M. Pak, Jian Zheng, William R. Jarnagin, Richard K. G. Do, Amber L. Simpson
2018	—	`conf`	Technical note: Nonrigid registration for laparoscopic liver surgery using sparse intraoperative data. Image-Guided Procedures Jon S. Heiselman, Jarrod A. Collins, Logan W. Clements, Jared A. Weis, Amber L. Simpson, Sunil K. Geevarghese, T. Peter Kingham, William R. Jarnagin, Michael I. Miga
2017	—	`conf`	Emulation of the laparoscopic environment for image-guided liver surgery via an abdominal phantom system with anatomical ligamenture. Image-Guided Procedures Jon S. Heiselman, Jarrod A. Collins, Logan W. Clements, Jared A. Weis, Amber L. Simpson, Sunil K. Geevarghese, William R. Jarnagin, Michael I. Miga
2017	J	`jnl`	Improving Registration Robustness for Image-Guided Liver Surgery in a Novel Human-to-Phantom Data Framework. IEEE Trans. Medical Imaging Jarrod A. Collins, Jared A. Weis, Jon S. Heiselman, Logan W. Clements, Amber L. Simpson, William R. Jarnagin, Michael I. Miga
2017	—	`conf`	Liver segmentation in color images. Image-Guided Procedures Burton Ma, T. Peter Kingham, Michael I. Miga, William R. Jarnagin, Amber L. Simpson
2017	—	`conf`	On the nature of data collection for soft-tissue image-to-physical organ registration: a noise characterization study. Image-Guided Procedures Jarrod A. Collins, Jon S. Heiselman, Jared A. Weis, Logan W. Clements, Amber L. Simpson, William R. Jarnagin, Michael I. Miga
2017	—	`conf`	Preoperative assessment of microvascular invasion in hepatocellular carcinoma. Computer-Aided Diagnosis Jayasree Chakraborty, Jian Zheng, Mithat Gönen, William R. Jarnagin, Ronald P. DeMatteo, Richard K. G. Do, Amber L. Simpson
2017	—	`conf`	Toward integrated image guided liver surgery. Image-Guided Procedures William R. Jarnagin, Amber L. Simpson, Michael I. Miga
2015	—	`conf`	Image guidance improves localization of sonographically occult colorectal liver metastases. Image-Guided Procedures Universe Leung, Amber L. Simpson, Lauryn B. Adams, William R. Jarnagin, Michael I. Miga, T. Peter Kingham
2015	—	`conf`	Method for evaluation of predictive models of microwave ablation via post-procedural clinical imaging. Image-Guided Procedures Jarrod A. Collins, Daniel B. Brown, T. Peter Kingham, William R. Jarnagin, Michael I. Miga, Logan W. Clements
2015	—	`conf`	Validation of model-based deformation correction in image-guided liver surgery via tracked intraoperative ultrasound: preliminary method and results. Image-Guided Procedures Logan W. Clements, Jarrod A. Collins, Yifei Wu, Amber L. Simpson, William R. Jarnagin, Michael I. Miga
2014	J	`jnl`	A Mechanics-Based Nonrigid Registration Method for Liver Surgery Using Sparse Intraoperative Data. IEEE Trans. Medical Imaging D. Caleb Rucker, Yifei Wu, Logan W. Clements, Janet E. Ondrake, Thomas S. Pheiffer, Amber L. Simpson, William R. Jarnagin, Michael I. Miga
2014	B	`conf`	Texture feature analysis for prediction of postoperative liver failure prior to surgery. Image Processing Amber L. Simpson, Richard K. G. Do, E. Patricia Parada, Michael I. Miga, William R. Jarnagin
2011	—	`conf`	The sparse data extrapolation problem: strategies for soft-tissue correction for image-guided liver surgery. Image-Guided Procedures Michael I. Miga, Prashanth Dumpuri, Amber L. Simpson, Jared A. Weis, William R. Jarnagin