William K. Thompson

26 papers Misc 15Journal 8Unranked 3
YearRankTypeTitle / Venue / Authors
2018 J jnl
A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments.
J. Am. Medical Informatics Assoc.
Jennifer A. Pacheco, Luke V. Rasmussen, Richard C. Kiefer, Thomas R. Campion Jr., Peter Speltz, Robert J. Carroll, Sarah C. Stallings, Huan Mo, Monika Ahuja, Guoqian Jiang, Eric R. LaRose, Peggy L. Peissig, Ning Shang, Barbara Benoit, Vivian S. Gainer, Kenneth Borthwick, Kathryn L. Jackson, Ambrish Sharma, Andy Yizhou Wu, Abel N. Kho, Dan M. Roden, Jyotishman Pathak, Joshua C. Denny, William K. Thompson
2017 — conf
A Machine Learning Algorithm for Identifying Atopic Dermatitis in Adults from Electronic Health Records.
ICHI
Erin N. Gustafson, Jennifer A. Pacheco, Firas H. Wehbe, Jonathan Silverberg, William K. Thompson
2017 Misc conf
A Machine Learning-Based Approach for Identifying Atopic Dermatitis in Adults from Electronic Health Records.
AMIA
Erin N. Gustafson, Al'ona Furmanchuk, Jennifer A. Pacheco, Firas H. Wehbe, Kathryn L. Jackson, Abel N. Kho, William K. Thompson, Jonathan Silverberg
2017 Misc conf
Leveraging Value Sets from the Value Set Authority Center (VSAC) in a Standards-Based Clinical Data Repository.
AMIA
Richard C. Kiefer, Luke V. Rasmussen, Jennifer A. Pacheco, Peter Speltz, Joshua C. Denny, William K. Thompson, Jyotishman Pathak, Guoqian Jiang
2017 Misc conf
The Phenotype Execution and Modeling Architecture: A Roadmap Towards Next-generation Phenotyping Using EHRs.
AMIA
Peter Speltz, Luke V. Rasmussen, Richard C. Kiefer, Jennifer A. Pacheco, William K. Thompson, Guoqian Jiang, Jyotishman Pathak, Joshua C. Denny
2016 — conf
A Decompositional Approach to Executing Quality Data Model Algorithms on the i2b2 Platform.
CRI
Huan Mo, Guoqian Jiang, Jennifer A. Pacheco, Richard C. Kiefer, Luke V. Rasmussen, Jyotishman Pathak, Joshua C. Denny, William K. Thompson
2016 Misc conf
An NLP Extension to the Quality Data Model for EHR-Driven Phenotype Algorithm Authoring and Execution.
AMIA
Guoqian Jiang, William K. Thompson, Luke V. Rasmussen, Richard C. Kiefer, Jennifer A. Pacheco, Huan Mo, Peter Speltz, Joshua C. Denny, Jyotishman Pathak
2016 J jnl
Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution.
J. Biomed. Informatics
Guoqian Jiang, Richard C. Kiefer, Luke V. Rasmussen, Harold R. Solbrig, Huan Mo, Jennifer A. Pacheco, Jie Xu, Enid N. H. Montague, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
2016 J jnl
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability.
J. Am. Medical Informatics Assoc.
Jacqueline Kirby, Peter Speltz, Luke V. Rasmussen, Melissa A. Basford, Omri Gottesman, Peggy L. Peissig, Jennifer A. Pacheco, Gerard Tromp, Jyotishman Pathak, David S. Carrell, Stephen B. Ellis, Todd Lingren, William K. Thompson, Guergana Savova, Jonathan L. Haines, Dan M. Roden, Paul A. Harris, Joshua C. Denny
2015 Misc conf
A Genome- and Phenome- Wide Study of Diverticulosis.
AMIA
Yoonjung Y. Joo, Jennifer A. Pacheco, Loren L. Armstrong, William K. Thompson, Robert J. Carroll, Joshua C. Denny, Peggy L. Peissig, James G. Linneman, Jyotishman Pathak, Girish N. Nadkarni, Laura Rasmussen-Torvik, M. Geoffrey Hayes, Abel N. Kho
2015 — conf
A Standards-based Semantic Metadata Repository to Support EHR-driven Phenotype Authoring and Execution.
MedInfo
Guoqian Jiang, Harold R. Solbrig, Richard C. Kiefer, Luke V. Rasmussen, Huan Mo, Peter Speltz, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
2015 J jnl
Desiderata for computable representations of electronic health records-driven phenotype algorithms.
J. Am. Medical Informatics Assoc.
Huan Mo, William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Guoqian Jiang, Richard C. Kiefer, Qian Zhu, Jie Xu, Enid N. H. Montague, David S. Carrell, Todd Lingren, Frank D. Mentch, Yizhao Ni, Firas H. Wehbe, Peggy L. Peissig, Gerard Tromp, Eric B. Larson, Christopher G. Chute, Jyotishman Pathak, Joshua C. Denny, Peter Speltz, Abel N. Kho, Gail P. Jarvik, Cosmin Adrian Bejan, Marc S. Williams, Kenneth Borthwick, Terrie E. Kitchner, Dan M. Roden, Paul A. Harris
2015 Misc conf
Harmonization of Quality Data Model with HL7 FHIR to Support EHR-driven Phenotype Authoring and Execution: A Pilot Study.
AMIA
Guoqian Jiang, Harold R. Solbrig, Richard C. Kiefer, Luke V. Rasmussen, Huan Mo, Jennifer A. Pacheco, Enid N. H. Montague, Jie Xu, Peter Speltz, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
2015 Misc conf
PhEMA: Phenotype Modeling, Sharing and Execution Architecture.
AMIA
Jyotishman Pathak, Joshua C. Denny, William K. Thompson, Luke V. Rasmussen
2015 J jnl
Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research.
J. Am. Medical Informatics Assoc.
Jie Xu, Luke V. Rasmussen, Pamela L. Shaw, Guoqian Jiang, Richard C. Kiefer, Huan Mo, Jennifer A. Pacheco, Peter Speltz, Qian Zhu, Joshua C. Denny, Jyotishman Pathak, William K. Thompson, Enid N. H. Montague
2015 Misc conf
Translating Electronic Clinical Quality Measures to Executable, Portable, and Customizable Workflows in KNIME.
AMIA
Huan Mo, Jennifer A. Pacheco, Richard C. Kiefer, Luke V. Rasmussen, Jyotishman Pathak, Joshua C. Denny, William K. Thompson
2015 Misc conf
Usability of a phenotype builder prototype and lessons learned for the design of phenotyping tools.
AMIA
Enid N. H. Montague, Jie Xu, Luke V. Rasmussen, Joshua C. Denny, Guoqian Jiang, Richard C. Kiefer, Jennifer A. Pacheco, Peter Speltz, William K. Thompson, Jyotishman Pathak
2014 Misc conf
Automating Extraction and Calculation of Daily Dose and Duration for Medications in EHRs.
AMIA
Jennifer A. Pacheco, William K. Thompson, Kathryn L. Jackson, Abel N. Kho
2014 J jnl
Design patterns for the development of electronic health record-driven phenotype extraction algorithms.
J. Biomed. Informatics
Luke V. Rasmussen, William K. Thompson, Jennifer A. Pacheco, Abel N. Kho, David Carrell, Jyotishman Pathak, Peggy L. Peissig, Gerard Tromp, Joshua C. Denny, Justin B. Starren
2014 Misc conf
Evaluation of Existing Phenotype Authoring Tools for Clinical Research.
AMIA
Luke V. Rasmussen, Jie Xu, Ruijue Liu, Qian Zhu, Jennifer A. Pacheco, Jyotishman Pathak, William K. Thompson, Joshua C. Denny, Huan Mo, Richard C. Kiefer, Peter Speltz, Enid N. H. Montague
2014 Misc conf
Qualitative evaluation of three phenotype information models to find methotrexate liver injury.
AMIA
Qian Zhu, Huan Mo, Luke V. Rasmussen, Andrew R. Post, Jennifer A. Pacheco, Jie Xu, Richard C. Kiefer, Peter Speltz, Enid N. H. Montague, William K. Thompson, Joshua C. Denny, Jyotishman Pathak
2012 Misc conf
A Geographic Exploration of Colon Polyps.
AMIA
Anna Roberts, Arun Muthalagu, Jennifer A. Pacheco, William K. Thompson, Andrew Gawron, Abel N. Kho
2012 Misc conf
An Evaluation of the NQF Quality Data Model for Representing Electronic Health Record Driven Phenotyping Algorithms.
AMIA
William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Peggy L. Peissig, Joshua C. Denny, Abel N. Kho, Aaron W. Miller, Jyotishman Pathak
2012 Misc conf
Open Source Workflow Tools for Electronic Health Record Based Phenotyping Algorithms.
AMIA
William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Anna Roberts, Arun Muthalagu, Abel N. Kho
2012 J jnl
Portability of an algorithm to identify rheumatoid arthritis in electronic health records.
J. Am. Medical Informatics Assoc.
Robert J. Carroll, William K. Thompson, Anne E. Eyler, Arthur M. Mandelin, Tianxi Cai, Raquel M. Zink, Jennifer A. Pacheco, Chad S. Boomershine, Thomas A. Lasko, Hua Xu, Elizabeth W. Karlson, Raúl G. Pérez, Vivian S. Gainer, Shawn N. Murphy, Eric M. Ruderman, Richard M. Pope, Robert M. Plenge, Abel N. Kho, Katherine P. Liao, Joshua C. Denny
2012 J jnl
Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study.
J. Am. Medical Informatics Assoc.
Abel N. Kho, M. Geoffrey Hayes, Laura Rasmussen-Torvik, Jennifer A. Pacheco, William K. Thompson, Loren L. Armstrong, Joshua C. Denny, Peggy L. Peissig, Aaron W. Miller, Wei-Qi Wei, Suzette J. Bielinski, Christopher G. Chute, Cynthia L. Leibson, Gail P. Jarvik, David R. Crosslin, Christopher S. Carlson, Katherine M. Newton, Wendy A. Wolf, Rex L. Chisholm, William L. Lowe