Wenjie Shu

12 papers A* 1C 1Journal 9Unranked 1
YearRankTypeTitle / Venue / Authors
2023 J jnl
Design of prime-editing guide RNAs with deep transfer learning.
Nat. Mac. Intell.
Feng Liu, Shuhong Huang, Jiongsong Hu, Xiaozhou Chen, Ziguo Song, Junguo Dong, Yao Liu, Xingxu Huang, Shengqi Wang, Xiaolong Wang, Wenjie Shu
2020 — conf
Predicting CRISPR-Cas9 Off-target with Self-supervised Neural Networks.
BIBM
Dong Chen, Wenjie Shu, Shaoliang Peng
2020 C conf
Predicting functional elements and variants effects in non-coding regions based on deep learning.
HealthCom
Yunhao Liu, Shaoliang Peng, Wenjie Shu, Bin Jiang, Chao Yang, Kun Xie
2019 J jnl
LIVE: a manually curated encyclopedia of experimentally validated interactions of lncRNAs.
Database J. Biol. Databases Curation
Gaole An, Jiaqi Sun, Chao Ren, Zhangyi Ouyang, Lingyun Zhu, Xiaochen Bo, Shaoliang Peng, Wenjie Shu
2018 J jnl
Deep Learning and Its Applications in Biomedicine.
Genom. Proteom. Bioinform.
Chensi Cao, Feng Liu, Hai Tan, Deshou Song, Wenjie Shu, Weizhong Li, Yiming Zhou, Xiaochen Bo, Zhi Xie
2017 J jnl
BiRen: predicting enhancers with a deep-learning-based model using the DNA sequence alone.
Bioinform.
Bite Yang, Feng Liu, Chao Ren, Zhangyi Ouyang, Ziwei Xie, Xiaochen Bo, Wenjie Shu
2009 J jnl
EvoRSR: an integrated system for exploring evolution of RNA structural robustness.
BMC Bioinform.
Wenjie Shu, Ming Ni, Xiaochen Bo, Zhiqiang Zheng, Shengqi Wang
2008 J jnl
A novel representation of RNA secondary structure based on element-contact graphs.
BMC Bioinform.
Wenjie Shu, Xiaochen Bo, Zhiqiang Zheng, Shengqi Wang
2007 J jnl
RSRE: RNA structural robustness evaluator.
Nucleic Acids Res.
Wenjie Shu, Xiaochen Bo, Zhiqiang Zheng, Shengqi Wang
2006 J jnl
RDMAS: a web server for RNA deleterious mutation analysis.
BMC Bioinform.
Wenjie Shu, Xiaochen Bo, Rujia Liu, Dongsheng Zhao, Zhiqiang Zheng, Shengqi Wang
2006 J jnl
Selection of antisense oligonucleotides based on multiple predicted target mRNA structures.
BMC Bioinform.
Xiaochen Bo, Shaoke Lou, Daochun Sun, Wenjie Shu, Jing Yang, Shengqi Wang
2004 A* conf
Computing Configuration Space Obstacles using Polynomial Transforms.
ICRA
Wenjie Shu, Zhiqiang Zheng