Wen-Lian Hsu - RankMe

264 papers A* 6A 8B 21C 12Misc 24Journal 110Unranked 80

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	TMUNLPG3 at the NTCIR-18 RadNLP Task. NTCIR Wen-Chao Yeh, Yan-Chun Hsing, Tzu-Yi Li, Nitisalapa Timsatid, Shih-Chuan Chang, Shih-Hsin Hsiao, Chu-Chun Wang, Pak-Yue Chan, Wen-Lian Hsu, Yung-Chun Chang
2024	J	`jnl`	Surveying biomedical relation extraction: a critical examination of current datasets and the proposal of a new resource. Briefings Bioinform. Ming-Siang Huang, Jen-Chieh Han, Pei-Yen Lin, Yu-Ting You, Richard Tzong-Han Tsai, Wen-Lian Hsu
2023	J	`jnl`	Semantic Template-based Convolutional Neural Network for Text Classification. ACM Trans. Asian Low Resour. Lang. Inf. Process. Yung-Chun Chang, Siu Hin Ng, Jung-Peng Chen, Yu-Chi Liang, Wen-Lian Hsu
2022	J	`jnl`	A BERT-based ensemble learning approach for the BioCreative VII challenges: full-text chemical identification and multi-label classification in PubMed articles. Database J. Biol. Databases Curation Sheng-Jie Lin, Wen-Chao Yeh, Yu-Wen Chiu, Yung-Chun Chang, Min-Huei Hsu, Yi-Shin Chen, Wen-Lian Hsu
2022	—	`conf`	Multifaceted Assessments of Traditional Chinese Word Segmentation Tool on Large Corpora. ROCLING Wen-Chao Yeh, Yu-Lun Hsieh, Yung-Chun Chang, Wen-Lian Hsu
2022	J	`jnl`	Principle-Based Approach for the De-Identification of Code-Mixed Electronic Health Records. IEEE Access Chen-Kai Wang, Feng-Duo Wang, You-Qian Lee, Pei-Tsz Chen, Bo-Hong Wang, Chu-Hsien Su, Joseph Chin-Chi Kuo, Chi-Shin Wu, Yi-Ling Chien, Hong-Jie Dai, Vincent S. Tseng, Wen-Lian Hsu
2021	J	`jnl`	A flexible template generation and matching method with applications for publication reference metadata extraction. J. Assoc. Inf. Sci. Technol. Ting-Hao Yang, Yu-Lun Hsieh, Shih-Hung Liu, Yung-Chun Chang, Wen-Lian Hsu
2021	J	`jnl`	Co-AMPpred for in silico-aided predictions of antimicrobial peptides by integrating composition-based features. BMC Bioinform. Onkar Singh, Wen-Lian Hsu, Emily Chia-Yu Su
2021	J	`jnl`	LBERT: Lexically aware Transformer-based Bidirectional Encoder Representation model for learning universal bio-entity relations. Bioinform. Neha Warikoo, Yung-Chun Chang, Wen-Lian Hsu
2021	J	`jnl`	LBERT: Lexically-aware Transformers based Bidirectional Encoder Representation model for learning Universal Bio-Entity Relations. Bioinform. Neha Warikoo, Yung-Chun Chang, Wen-Lian Hsu
2021	—	`conf`	More than Extracting "Important" Sentences: the Application of PEGASUS. TAAI Ting-Hao Yang, Ching-Ching Lu, Wen-Lian Hsu
2020	J	`jnl`	Biomedical named entity recognition and linking datasets: survey and our recent development. Briefings Bioinform. Ming-Siang Huang, Po-Ting Lai, Pei-Yen Lin, Yu-Ting You, Richard Tzong-Han Tsai, Wen-Lian Hsu
2020	C	`conf`	KIDER: Knowledge-Infused Document Embedding Representation for Text Categorization. IEA/AIE Yu-Ting Chen, Zheng-Wen Lin, Yung-Chun Chang, Wen-Lian Hsu
2020	J	`jnl`	miRTarBase 2020: updates to the experimentally validated microRNA?target interaction database. Nucleic Acids Res. Hsi-Yuan Huang, Yang-Chi-Dung Lin, Jing Li, Kai-Yao Huang, Sirjana Shrestha, Hsiao-Chin Hong, Yun Tang, Yigang Chen, Chen-Nan Jin, Yuan Yu, Jia-Tong Xu, Yue-Ming Li, Xiao-Xuan Cai, Zhen-Yu Zhou, Xiao-Hang Chen, Yuan-Yuan Pei, Liang Hu, Jin-Jiang Su, Shi-Dong Cui, Fei Wang, Yue-Yang Xie, Si-Yuan Ding, Meng-Fan Luo, Chih-Hung Chou, Nai-Wen Chang, Kai-Wen Chen, Yu-Hsiang Cheng, Xin-Hong Wan, Wen-Lian Hsu, Tzong-Yi Lee, Feng-Xiang Wei, Hsien-Da Huang
2019	—	`conf`	MONPA: 中文命名實體及斷詞與詞性同步標註系統(MONPA: A Multitask Chinese Segmentation, Named-entity and Part-of-speech Annotator). ROCLING Wen-Chao Yeh, Yu-Lun Hsieh, Yung-Chun Chang, Wen-Lian Hsu
2019	J	`jnl`	Medical knowledge infused convolutional neural networks for cohort selection in clinical trials. J. Am. Medical Informatics Assoc. Chi-Jen Chen, Neha Warikoo, Yung-Chun Chang, Jin-Hua Chen, Wen-Lian Hsu
2019	J	`jnl`	Natural Adversarial Sentence Generation with Gradient-based Perturbation. CoRR Yu-Lun Hsieh, Minhao Cheng, Da-Cheng Juan, Wei Wei, Wen-Lian Hsu, Cho-Jui Hsieh
2019	—	`conf`	On the Robustness of Self-Attentive Models. ACL (1) Yu-Lun Hsieh, Minhao Cheng, Da-Cheng Juan, Wei Wei, Wen-Lian Hsu, Cho-Jui Hsieh
2019	J	`jnl`	Revised JNLPBA Corpus: A Revised Version of Biomedical NER Corpus for Relation Extraction Task. CoRR Ming-Siang Huang, Po-Ting Lai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2019	J	`jnl`	Statistical principle-based approach for recognizing and normalizing microRNAs described in scientific literature. Database J. Biol. Databases Curation Hong-Jie Dai, Chen-Kai Wang, Nai-Wen Chang, Ming-Siang Huang, Jitendra Jonnagaddala, Feng-Duo Wang, Wen-Lian Hsu
2018	B	`ed.`	29th International Symposium on Algorithms and Computation, ISAAC 2018, Jiaoxi, Yilan, Taiwan, December 16-19, 2018 ISAAC Wen-Lian Hsu, Der-Tsai Lee, Chung-Shou Liao
2018	—	`conf`	An Ensemble Neural Network Model for Benefiting Pregnancy Health Stats from Mining Social Media. AIRS Neha Warikoo, Yung-Chun Chang, Hong-Jie Dai, Wen-Lian Hsu
2018	J	`jnl`	DART: a fast and accurate RNA-seq mapper with a partitioning strategy. Bioinform. Hsin-Nan Lin, Wen-Lian Hsu
2018	J	`jnl`	Entailment-Based Intelligent System for Software Project Monitoring and Control. IEEE Syst. J. Yung-Chun Chang, Cheng-Wei Shih, Wen-Lian Hsu
2018	J	`jnl`	LPTK: a linguistic pattern-aware dependency tree kernel approach for the BioCreative VI CHEMPROT task. Database J. Biol. Databases Curation Neha Warikoo, Yung-Chun Chang, Wen-Lian Hsu
2018	J	`jnl`	Statistical principle-based approach for gene and protein related object recognition. J. Cheminformatics Po-Ting Lai, Ming-Siang Huang, Ting-Hao Yang, Wen-Lian Hsu, Richard Tzong-Han Tsai
2018	J	`jnl`	miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions. Nucleic Acids Res. Chih-Hung Chou, Sirjana Shrestha, Chi-Dung Yang, Nai-Wen Chang, Yu-Ling Lin, Kuang-Wen Liao, Wei-Chih Huang, Ting-Hsuan Sun, Siang-Jyun Tu, Wei-Hsiang Lee, Men-Yee Chiew, Chun-San Tai, Ting-Yen Wei, Tzi-Ren Tsai, Hsin-Tzu Huang, Chung-Yu Wang, Hsin-Yi Wu, Shu-Yi Ho, Pin-Rong Chen, Cheng-Hsun Chuang, Pei-Jung Hsieh, Yi-Shin Wu, Wen-Liang Chen, Meng-Ju Li, Yu-Chun Wu, Xin-Yi Huang, Fung Ling Ng, Waradee Buddhakosai, Pei-Chun Huang, Kuan-Chun Lan, Chia-Yen Huang, Shun-Long Weng, Yeong-Nan Cheng, Chao Liang, Wen-Lian Hsu, Hsien-Da Huang
2017	J	`jnl`	A Position-Aware Language Modeling Framework for Extractive Broadcast News Speech Summarization. ACM Trans. Asian Low Resour. Lang. Inf. Process. Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2017	J	`jnl`	A semantic frame-based intelligent agent for topic detection. Soft Comput. Yung-Chun Chang, Yu-Lun Hsieh, Cen-Chieh Chen, Wen-Lian Hsu
2017	J	`jnl`	An Empirical Comparison of Contemporary Unsupervised Approaches for Extractive Speech Summarization. Int. J. Comput. Linguistics Chin. Lang. Process. Shih-Hung Liu, Kuan-Yu Chen, Kai-Wun Shih, Berlin Chen, Hsin-Min Wang, Wen-Lian Hsu
2017	J	`jnl`	Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy. Database J. Biol. Databases Curation Nai-Wen Chang, Hong-Jie Dai, Yung-Yu Shih, Chi-Yang Wu, Mira Anne C. dela Rosa, Rofeamor P. Obena, Yu-Ju Chen, Wen-Lian Hsu, Yen-Jen Oyang
2017	—	`conf`	CIAL System at the NTCIR-13 STC-2 Task. NTCIR Yung-Chun Chang, Yu-Lun Hsieh, Wen-Lian Hsu
2017	—	`conf`	CIAL at IJCNLP-2017 Task 2: An Ensemble Valence-Arousal Analysis System for Chinese Words and Phrases. IJCNLP (Shared Tasks) Zheng-Wen Lin, Yung-Chun Chang, Chen-Ann Wang, Yu-Lun Hsieh, Wen-Lian Hsu
2017	—	`conf`	Chemical-Induced Disease Detection Using Invariance-based Pattern Learning Model. DDDSM@IJCNLP Neha Warikoo, Yung-Chun Chang, Wen-Lian Hsu
2017	J	`jnl`	FISER: A Feature-Based Detection System for Person Interactions. Comput. Intell. Yung-Chun Chang, Pi-Hua Chuang, Chien Chin Chen, Wen-Lian Hsu
2017	—	`conf`	Identifying Protein-protein Interactions in Biomedical Literature using Recurrent Neural Networks with Long Short-Term Memory. IJCNLP(2) Yu-Lun Hsieh, Yung-Chun Chang, Nai-Wen Chang, Wen-Lian Hsu
2017	—	`conf`	Incorporating Dependency Trees Improve Identification of Pregnant Women on Social Media Platforms. DDDSM@IJCNLP Yi-Jie Huang, Chu-Hsien Su, Yi-Chun Chang, Tseng-Hsin Ting, Tzu-Yuan Fu, Rou-Min Wang, Hong-Jie Dai, Yung-Chun Chang, Jitendra Jonnagaddala, Wen-Lian Hsu
2017	J	`jnl`	Kart: a divide-and-conquer algorithm for NGS read alignment. Bioinform. Hsin-Nan Lin, Wen-Lian Hsu
2017	Misc	`conf`	Leveraging manifold learning for extractive broadcast news summarization. ICASSP Shih-Hung Liu, Kuan-Yu Chen, Berlin Chen, Hsin-Min Wang, Wen-Lian Hsu
2017	—	`conf`	MONPA: Multi-objective Named-entity and Part-of-speech Annotator for Chinese using Recurrent Neural Network. IJCNLP(2) Yu-Lun Hsieh, Yung-Chun Chang, Yi-Jie Huang, Shu-Hao Yeh, Chun-Hung Chen, Wen-Lian Hsu
2017	A*	`conf`	SPIRIT: A Tree Kernel-Based Method for Topic Person Interaction Detection (Extended Abstract). ICDE Yung-Chun Chang, Chien Chin Chen, Wen-Lian Hsu
2016	J	`jnl`	BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID. Database J. Biol. Databases Curation Sun Kim, Rezarta Islamaj Dogan, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia N. Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydin, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, Donald C. Comeau
2016	—	`conf`	Exploiting graph regularized nonnegative matrix factorization for extractive speech summarization. APSIPA Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2016	A	`conf`	Exploring Word Mover's Distance and Semantic-Aware Embedding Techniques for Extractive Broadcast News Summarization. INTERSPEECH Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2016	—	`conf`	How Do I Look? Publicity Mining From Distributed Keyword Representation of Socially Infused News Articles. SocialNLP@EMNLP Yu-Lun Hsieh, Yung-Chun Chang, Chun-Han Chu, Wen-Lian Hsu
2016	—	`conf`	IASL valence-arousal analysis system at IALP 2016 shared task: Dimensional sentiment analysis for Chinese words. IALP Yu-Lun Hsieh, Chen-Ann Wang, Ying-Wei Wu, Yung-Chun Chang, Wen-Lian Hsu
2016	J	`jnl`	Linguistic Template Extraction for Recognizing Reader-Emotion. Int. J. Comput. Linguistics Chin. Lang. Process. Yung-Chun Chang, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu
2016	J	`jnl`	MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification. Nucleic Acids Res. T. Mamie Lih, Wai-Kok Choong, Chen-Chun Chen, Cheng-Wei Cheng, Hsin-Nan Lin, Ching-Tai Chen, Hui-Yin Chang, Wen-Lian Hsu, Ting-Yi Sung
2016	J	`jnl`	MET network in PubMed: a text-mined network visualization and curation system. Database J. Biol. Databases Curation Hong-Jie Dai, Chu-Hsien Su, Po-Ting Lai, Ming-Siang Huang, Jitendra Jonnagaddala, Toni Rose Jue, Shruti Rao, Hui-Jou Chou, Marija Milacic, Onkar Singh, Syed Abdul Shabbir, Wen-Lian Hsu
2016	J	`jnl`	PIPE: a protein-protein interaction passage extraction module for BioCreative challenge. Database J. Biol. Databases Curation Yung-Chun Chang, Chun-Han Chu, Yu-Chen Su, Chien Chin Chen, Wen-Lian Hsu
2016	Misc	`conf`	Principle-Based Approach for Semi-Automatic Construction of a Restaurant Question Answering System from Limited Datasets. IRI Ting-Hao Yang, Yu-Lun Hsieh, You-Shan Chung, Cheng-Wei Shih, Shih-Hung Liu, Yung-Chun Chang, Wen-Lian Hsu
2016	J	`jnl`	SPIRIT: A Tree Kernel-Based Method for Topic Person Interaction Detection. IEEE Trans. Knowl. Data Eng. Yung-Chun Chang, Chien Chin Chen, Wen-Lian Hsu
2016	—	`conf`	Sentiment Analysis of Chinese Microblog Message using Neural Network-based Vector Representation for Measuring Regional Prejudice. PACIS Yung-Chun Chang, Chin-Shun Chou, Yang Zhang, Xi Wang, Wen-Lian Hsu
2016	—	`conf`	Sentiment analysis on Chinese movie review with distributed keyword vector representation. TAAI Chun-Han Chu, Chen-Ann Wang, Yung-Chun Chang, Ying-Wei Wu, Yu-Lun Hsieh, Wen-Lian Hsu
2016	C	`conf`	Statistical Principle-Based Approach for Detecting miRNA-Target Gene Interaction Articles. BIBE Nai-Wen Chang, Hong-Jie Dai, Yu-Lun Hsieh, Wen-Lian Hsu
2016	J	`jnl`	miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database. Nucleic Acids Res. Chih-Hung Chou, Nai-Wen Chang, Sirjana Shrestha, Sheng-Da Hsu, Yu-Ling Lin, Wei-Hsiang Lee, Chi-Dung Yang, Hsiao-Chin Hong, Ting-Yen Wei, Siang-Jyun Tu, Tzi-Ren Tsai, Shu-Yi Ho, Ting-Yan Jian, Hsin-Yi Wu, Pin-Rong Chen, Nai-Chieh Lin, Hsin-Tzu Huang, Tzu-Ling Yang, Chung-Yuan Pai, Chun-San Tai, Wen-Liang Chen, Chia-Yen Huang, Chun-Chi Liu, Shun-Long Weng, Kuang-Wen Liao, Wen-Lian Hsu, Hsien-Da Huang
2016	—	`conf`	運用序列到序列生成架構於重寫式自動摘要(Exploiting Sequence-to-Sequence Generation Framework for Automatic Abstractive Summarization)[In Chinese]. ROCLING Yu-Lun Hsieh, Shih-Hung Liu, Kuan-Yu Chen, Hsin-Min Wang, Wen-Lian Hsu, Berlin Chen
2015	J	`jnl`	A context-aware approach for progression tracking of medical concepts in electronic medical records. J. Biomed. Informatics Nai-Wen Chang, Hong-Jie Dai, Jitendra Jonnagaddala, Chih-Wei Chen, Richard Tzong-Han Tsai, Wen-Lian Hsu
2015	J	`jnl`	Combining Relevance Language Modeling and Clarity Measure for Extractive Speech Summarization. IEEE ACM Trans. Audio Speech Lang. Process. Shih-Hung Liu, Kuan-Yu Chen, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2015	—	`conf`	Constructing sentiment sensitive vectors for word polarity classification. TAAI Chun-Han Chu, Apoorva Honnegowda Roopa, Yung-Chun Chang, Wen-Lian Hsu
2015	—	`conf`	Distributed keyword vector representation for document categorization. TAAI Yu-Lun Hsieh, Shih-Hung Liu, Yung-Chun Chang, Wen-Lian Hsu
2015	J	`jnl`	Extractive Broadcast News Summarization Leveraging Recurrent Neural Network Language Modeling Techniques. IEEE ACM Trans. Audio Speech Lang. Process. Kuan-Yu Chen, Shih-Hung Liu, Berlin Chen, Hsin-Min Wang, Ea-Ee Jan, Wen-Lian Hsu, Hsin-Hsi Chen
2015	—	`conf`	Incorporating proximity information in relevance language modeling for extractive speech summarization. APSIPA Shih-Hung Liu, Hung-Shin Lee, Hsiao-Tsung Hung, Kuan-Yu Chen, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2015	—	`conf`	Linguistic Template Extraction for Recognizing Reader-Emotion and Emotional Resonance Writing Assistance. ACL (2) Yung-Chun Chang, Cen-Chieh Chen, Yu-Lun Hsieh, Chien Chin Chen, Wen-Lian Hsu
2015	Misc	`conf`	Neural Network-Based Vector Representation of Documents for Reader-Emotion Categorization. IRI Yu-Lun Hsieh, Shih-Hung Liu, Yung-Chun Chang, Wen-Lian Hsu
2015	A	`conf`	Positional language modeling for extractive broadcast news speech summarization. INTERSPEECH Shih-Hung Liu, Kuan-Yu Chen, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2015	J	`jnl`	Rank correlation analysis of RITE datasets and evaluation metrics - an observation on NTCIR-10 RITE Chinese subtasks. Web Intell. Chuan-Jie Lin, Cheng-Wei Lee, Cheng-Wei Shih, Wen-Lian Hsu
2015	—	`conf`	Semantic Frame-Based Approach for Reader-Emotion Detection. PACIS Yung-Chun Chang, Cen-Chieh Chen, Wen-Lian Hsu
2014	—	`conf`	A Frame-Based Approach for Reference Metadata Extraction. TAAI Yu-Lun Hsieh, Shih-Hung Liu, Ting-Hao Yang, Yu-Hsuan Chen, Yung-Chun Chang, Gladys Hsieh, Cheng-Wei Shih, Chun-Hung Lu, Wen-Lian Hsu
2014	—	`conf`	A margin-based discriminative modeling approach for extractive speech summarization. APSIPA Shih-Hung Liu, Kuan-Yu Chen, Berlin Chen, Ea-Ee Jan, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2014	A	`conf`	A recurrent neural network language modeling framework for extractive speech summarization. ICME Kuan-Yu Chen, Shih-Hung Liu, Berlin Chen, Hsin-Min Wang, Wen-Lian Hsu, Hsin-Hsi Chen
2014	—	`conf`	An Interaction Pattern Kernel Approach for Protein-Protein Interaction Extraction from Biomedical Literature. TAAI Yung-Chun Chang, Yu-Chen Su, Nai-Wen Chang, Wen-Lian Hsu
2014	Misc	`conf`	Effective pseudo-relevance feedback for language modeling in extractive speech summarization. ICASSP Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2014	A	`conf`	Enhanced language modeling for extractive speech summarization with sentence relatedness information. INTERSPEECH Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Hsu-Chun Yen, Wen-Lian Hsu
2014	J	`jnl`	Joint Learning of Entity Linking Constraints Using a Markov-Logic Network. Int. J. Comput. Linguistics Chin. Lang. Process. Hong-Jie Dai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2014	A*	`conf`	Leveraging Effective Query Modeling Techniques for Speech Recognition and Summarization. EMNLP Kuan-Yu Chen, Shih-Hung Liu, Berlin Chen, Ea-Ee Jan, Hsin-Min Wang, Wen-Lian Hsu, Hsin-Hsi Chen
2014	J	`jnl`	LiverCancerMarkerRIF: a liver cancer biomarker interactive curation system combining text mining and expert annotations. Database J. Biol. Databases Curation Hong-Jie Dai, Johnny Chi-Yang Wu, Josan Wei-San Lin, Aaron James F. Reyes, Mira Anne C. dela Rosa, Syed Abdul Shabbir, Richard Tzong-Han Tsai, Wen-Lian Hsu
2014	—	`conf`	Semantic Frame-Based Natural Language Understanding for Intelligent Topic Detection Agent. IEA/AIE (1) Yung-Chun Chang, Yu-Lun Hsieh, Cen-Chieh Chen, Wen-Lian Hsu
2014	C	`conf`	Semantic Frame-based Statistical Approach for Topic Detection. PACLIC Yung-Chun Chang, Yu-Lun Hsieh, Cen-Chieh Chen, Chad Liu, Chun-Hung Lu, Wen-Lian Hsu
2014	Misc	`conf`	Sense decomposition from E-HowNet for word similarity measurement. IRI Cheng-Wei Shih, Yu-Lun Hsieh, Wen-Lian Hsu
2014	—	`conf`	探究新穎語句模型化技術於節錄式語音摘要 (Investigating Novel Sentence Modeling Techniques for Extractive Speech Summarization) [In Chinese]. ROCLING Shih-Hung Liu, Kuan-Yu Chen, Yu-Lun Hsieh, Berlin Chen, Hsin-Min Wang, Wen-Lian Hsu
2013	—	`conf`	A Composite Kernel Approach for Detecting Interactive Segments in Chinese Topic Documents. AIRS Yung-Chun Chang, Chien Chin Chen, Wen-Lian Hsu
2013	—	`conf`	IASL RITE System at NTCIR-10. NTCIR Cheng-Wei Shih, Chad Liu, Cheng-Wei Lee, Wen-Lian Hsu
2013	J	`jnl`	Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices. BMC Bioinform. Jhih-Siang Lai, Cheng-Wei Cheng, Allan Lo, Ting-Yi Sung, Wen-Lian Hsu
2013	Misc	`conf`	Rank correlation analysis of NTCIR-10 RITE-2 Chinese datasets and evaluation metrics. IRI Chuan-Jie Lin, Cheng-Wei Lee, Cheng-Wei Shih, Wen-Lian Hsu
2013	—	`conf`	Sinica-IASL Chinese spelling check system at Sighan-7. SIGHAN@IJCNLP Ting-Hao Yang, Yu-Lun Hsieh, Yu-Hsuan Chen, Michael Tsang, Cheng-Wei Shih, Wen-Lian Hsu
2013	J	`jnl`	T-HOD: a literature-based candidate gene database for hypertension, obesity and diabetes. Database J. Biol. Databases Curation Hong-Jie Dai, Chi-Yang Wu, Richard Tzong-Han Tsai, Wen-Harn Pan, Wen-Lian Hsu
2013	J	`jnl`	TEMPTING system: A hybrid method of rule and machine learning for temporal relation extraction in patient discharge summaries. J. Biomed. Informatics Yung-Chun Chang, Hong-Jie Dai, Johnny Chi-Yang Wu, Jian-Ming Chen, Richard Tzong-Han Tsai, Wen-Lian Hsu
2013	J	`jnl`	The Left and Right Context of a Word: Overlapping Chinese Syllable Word Segmentation with Minimal Context. ACM Trans. Asian Lang. Inf. Process. Mike Tian-Jian Jiang, Tsung-Hsien Lee, Wen-Lian Hsu
2013	—	`conf`	改良語句模型技術於節錄式語音摘要之研究 (Improved Sentence Modeling Techniques for Extractive Speech Summarization) [In Chinese]. ROCLING Shih-Hung Liu, Kuan-Yu Chen, Hsin-Min Wang, Wen-Lian Hsu, Berlin Chen
2012	J	`jnl`	Coreference resolution of medical concepts in discharge summaries by exploiting contextual information. J. Am. Medical Informatics Assoc. Hong-Jie Dai, Chun-Yu Chen, Chi-Yang Wu, Po-Ting Lai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2012	—	`conf`	Cost-benefit Analysis of Two-Stage Conditional Random Fields based English-to-Chinese Machine Transliteration. NEWS@ACL Chan-Hung Kuo, Shih-Hung Liu, Mike Tian-Jian Jiang, Cheng-Wei Lee, Wen-Lian Hsu
2012	J	`jnl`	Enhancement of Feature Engineering for Conditional Random Field Learning in Chinese Word Segmentation Using Unlabeled Data. Int. J. Comput. Linguistics Chin. Lang. Process. Mike Tian-Jian Jiang, Cheng-Wei Shih, Ting-Hao Yang, Chan-Hung Kuo, Richard Tzong-Han Tsai, Wen-Lian Hsu
2012	Misc	`conf`	Evaluating and enhancing cross-domain rank predictability of textual entailment datasets. IRI Cheng-Wei Lee, Chuan-Jie Lin, Hideki Shima, Wen-Lian Hsu
2012	—	`conf`	FISER: An Effective Method for Detecting Interactions between Topic Persons. AIRS Yung-Chun Chang, Pi-Hua Chuang, Chien Chin Chen, Wen-Lian Hsu
2012	J	`jnl`	Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing. BMC Bioinform. Emily Chia-Yu Su, Jia-Ming Chang, Cheng-Wei Cheng, Ting-Yi Sung, Wen-Lian Hsu
2012	J	`jnl`	Validating Contradiction in Texts Using Online Co-Mention Pattern Checking. ACM Trans. Asian Lang. Inf. Process. Cheng-Wei Shih, Chengwei Lee, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	—	`conf`	Discovering Links by Context Similarity and Translated Key Phrases for NTCIR9 CrossLink. NTCIR Yi-Hsun Lee, Chung-Yao Chuang, Cen-Chieh Chen, Wen-Lian Hsu
2011	—	`conf`	English-to-Chinese Machine Transliteration using Accessor Variety Features of Source Graphemes. NEWS@IJCNLP Mike Tian-Jian Jiang, Chan-Hung Kuo, Wen-Lian Hsu
2011	—	`conf`	Enhancement of unsupervised feature selection for conditional random fields learning in Chinese word segmentation. NLPKE Mike Tian-Jian Jiang, Wen-Lian Hsu, Chan-Hung Kuo, Ting-Hao Yang
2011	A*	`conf`	Enhancing Search Results with Semantic Annotation Using Augmented Browsing. IJCAI Hong-Jie Dai, Wei-Chi Tsai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	B	`conf`	Entity Disambiguation Using a Markov-Logic Network. IJCNLP Hong-Jie Dai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	C	`conf`	Evaluation via Negativa of Chinese Word Segmentation for Information Retrieval. PACLIC Mike Tian-Jian Jiang, Cheng-Wei Shih, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	—	`conf`	IASL RITE System at NTCIR-9. NTCIR Cheng-Wei Shih, Cheng-Wei Lee, Ting-Hao Yang, Wen-Lian Hsu
2011	J	`jnl`	Integration of gene normalization stages and co-reference resolution using a Markov logic network. Bioinform. Hong-Jie Dai, Yen-Ching Chang, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	C	`conf`	Iteratively Estimating Pattern Reliability and Seed Quality With Extraction Consistency. PACLIC Yi-Hsun Lee, Chung-Yao Chuang, Wen-Lian Hsu
2011	J	`jnl`	MeInfoText 2.0: gene methylation and cancer relation extraction from biomedical literature. BMC Bioinform. Yu-Ching Fang, Po-Ting Lai, Hong-Jie Dai, Wen-Lian Hsu
2011	Misc	`conf`	Query and tag translation for Chinese-Korean cross-language social media retrieval. IRI Yu-Chun Wang, Jian-Ting Chen, Richard Tzong-Han Tsai, Wen-Lian Hsu
2011	—	`conf`	Robustness Analysis of Adaptive Chinese Input Methods. WTIM@IJCNLP Mike Tian-Jian Jiang, Cheng-Wei Lee, Chad Liu, Yung-Chun Chang, Wen-Lian Hsu
2011	J	`jnl`	TMPad: an integrated structural database for helix-packing folds in transmembrane proteins. Nucleic Acids Res. Allan Lo, Cheng-Wei Cheng, Yi-Yuan Chiu, Ting-Yi Sung, Wen-Lian Hsu
2011	B	`conf`	Text Patterns and Compression Models for Semantic Class Learning. IJCNLP Chung-Yao Chuang, Yi-Hsun Lee, Wen-Lian Hsu
2011	—	`conf`	Unsupervised Overlapping Feature Selection for Conditional Random Fields Learning in Chinese Word Segmentation. ROCLING Ting-Hao Yang, Mike Tian-Jian Jiang, Chan-Hung Kuo, Richard Tzong-Han Tsai, Wen-Lian Hsu
2010	—	`conf`	An Empirical Comparative Study of Manual Rule-Based and Statistical Question Classifiers on Heterogeneous Unseen Data. AIRS Cheng-Wei Lee, Min-Yuh Day, Wen-Lian Hsu
2010	—	`ch.`	Automated Generic Analysis Tools for Protein Quantitation Using Stable Isotope Labeling. Proteome Bioinformatics Wen-Lian Hsu, Ting-Yi Sung
2010	—	`conf`	Global Ranking via Data Fusion. COLING (Posters) Hong-Jie Dai, Po-Ting Lai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2010	A	`conf`	Multivariate multi-model approach for globally multimodal problems. GECCO Chung-Yao Chuang, Wen-Lian Hsu
2010	—	`conf`	Term Contributed Boundary Feature using Conditional Random Fields for Chinese Word Segmentation Task. ROCLING Mike Tian-Jian Jiang, Shih-Hung Liu, Cheng-Lung Sung, Wen-Lian Hsu
2010	—	`conf`	Term Contributed Boundary Tagging by Conditional Random Fields for SIGHAN 2010 Chinese Word Segmentation Bakeoff. CIPS-SIGHAN Mike Tian-Jian Jiang, Shih-Hung Liu, Cheng-Lung Sung, Wen-Lian Hsu
2009	J	`jnl`	A neural network model for constructing endophenotypes of common complex diseases: an application to male young-onset hypertension microarray data. Bioinform. Ke-Shiuan Lynn, Li-Lan Li, Yen-Ju Lin, Chiuen-Huei Wang, Shu-Hui Sheng, Ju-Hwa Lin, Wayne Liao, Wen-Lian Hsu, Wen-Harn Pan
2009	J	`jnl`	A supervised learning approach to biological question answering. Integr. Comput. Aided Eng. Ryan T. K. Lin, Justin Liang-Te Chiu, Hong-Jie Dai, Richard Tzong-Han Tsai, Min-Yuh Day, Wen-Lian Hsu
2009	J	`jnl`	Alignment-based surface patterns for factoid question answering systems. Integr. Comput. Aided Eng. Cheng-Lung Sung, Cheng-Wei Lee, Hsu-Chun Yen, Wen-Lian Hsu
2009	Misc	`conf`	An Analysis of Research on Information Reuse and Integration. IRI Min-Yuh Day, Chorng-Shyong Ong, Wen-Lian Hsu
2009	J	`jnl`	HypertenGene: extracting key hypertension genes from biomedical literature with position and automatically-generated template features. BMC Bioinform. Richard Tzong-Han Tsai, Po-Ting Lai, Hong-Jie Dai, Chi-Hsin Huang, Yue-Yang Bow, Yen-Ching Chang, Wen-Harn Pan, Wen-Lian Hsu
2009	J	`jnl`	MaXIC-Q Web: a fully automated web service using statistical and computational methods for protein quantitation based on stable isotope labeling and LC-MS. Nucleic Acids Res. Chih-Chiang Tsou, Yin-Hao Tsui, Yi-Hwa Yian, Yi-Ju Chen, Han-Yin Yang, Chuan-Yih Yu, Ke-Shiuan Lynn, Yu-Ju Chen, Ting-Yi Sung, Wen-Lian Hsu
2009	J	`jnl`	New Challenges for Biological Text-Mining in the Next Decade. J. Comput. Sci. Technol. Hong-Jie Dai, Yen-Ching Chang, Richard Tzong-Han Tsai, Wen-Lian Hsu
2009	J	`jnl`	Predicting helix-helix interactions from residue contacts in membrane proteins. Bioinform. Allan Lo, Yi-Yuan Chiu, Einar Andreas Rødland, Ping-Chiang Lyu, Ting-Yi Sung, Wen-Lian Hsu
2009	J	`jnl`	Protein subcellular localization prediction of eukaryotes using a knowledge-based approach. BMC Bioinform. Hsin-Nan Lin, Ching-Tai Chen, Ting-Yi Sung, Shinn-Ying Ho, Wen-Lian Hsu
2009	J	`jnl`	The measurement of user satisfaction with question answering systems. Inf. Manag. Chorng-Shyong Ong, Min-Yuh Day, Wen-Lian Hsu
2009	Misc	`conf`	Using Contextual Information to Clarify Gene Normalization Ambiguity. IRI Po-Ting Lai, Yue-Yang Bow, Chi-Hsin Huang, Hong-Jie Dai, Richard Tzong-Han Tsai, Wen-Lian Hsu
2009	J	`jnl`	Web-based pattern learning for named entity translation in Korean-Chinese cross-language information retrieval. Expert Syst. Appl. Yu-Chun Wang, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	—	`conf`	A Survey of State of the Art Biomedical Text Mining Techniques for Semantic Analysis. SUTC Hong-Jie Dai, Chi-Hsin Huang, Jaimie Yi-Wen Lin, Pei-Hsuan Chou, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	C	`conf`	A template alignment algorithm for question classification. ISI Cheng-Lung Sung, Min-Yuh Day, Hsu-Chun Yen, Wen-Lian Hsu
2008	Misc	`conf`	An alignment-based surface pattern for a question answering system. IRI Cheng-Lung Sung, Cheng-Wei Lee, Hsu-Chun Yen, Wen-Lian Hsu
2008	J	`jnl`	BIOSMILE web search: a web application for annotating biomedical entities and relations. Nucleic Acids Res. Hong-Jie Dai, Chi-Hsin Huang, Ryan T. K. Lin, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	Misc	`conf`	Biological question answering with syntactic and semantic feature matching and an improved mean reciprocal ranking measurement. IRI Ryan T. K. Lin, Justin Liang-Te Chiu, Hong-Jie Dai, Min-Yuh Day, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	J	`jnl`	Boosting Chinese Question Answering with Two Lightweight Methods: ABSPs and SCO-QAT. ACM Trans. Asian Lang. Inf. Process. Cheng-Wei Lee, Min-Yuh Day, Cheng-Lung Sung, Yi-Hsun Lee, Mike Tian-Jian Jiang, Chia-Wei Wu, Cheng-Wei Shih, Yu-Ren Chen, Wen-Lian Hsu
2008	—	`conf`	Complex Question Answering with ASQA at NTCIR 7 ACLIA. NTCIR Yi-Hsun Lee, Cheng-Wei Lee, Cheng-Lung Sung, Mon-Ting Tzou, Chih-Chien Wang, Shih-Hung Liu, Cheng-Wei Shih, Pei-Yin Yang, Wen-Lian Hsu
2008	—	`conf`	Compute the Term Contributed Frequency. ISDA (2) Cheng-Lung Sung, Hsu-Chun Yen, Wen-Lian Hsu
2008	Misc	`conf`	Development of an evaluation model for Question Answering Systems. IRI Chorng-Shyong Ong, Min-Yuh Day, Wen-Lian Hsu
2008	J	`jnl`	Emerging strengths in Asia Pacific bioinformatics. BMC Bioinform. Shoba Ranganathan, Wen-Lian Hsu, Ueng-Cheng Yang, Tin Wee Tan
2008	J	`jnl`	Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles. BMC Bioinform. Richard Tzong-Han Tsai, Hsi-Chuan Hung, Hong-Jie Dai, Yi-Wen Lin, Wen-Lian Hsu
2008	J	`jnl`	Exploring Shallow Answer Ranking Features in Cross-Lingual and Monolingual Factoid Question Answering. Int. J. Comput. Linguistics Chin. Lang. Process. Cheng-Wei Lee, Yi-Hsun Lee, Wen-Lian Hsu
2008	B	`conf`	Learning Patterns from the Web to Translate Named Entities for Cross Language Information Retrieval. IJCNLP Yu-Chun Wang, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	J	`jnl`	Predicting RNA-binding sites of proteins using support vector machines and evolutionary information. BMC Bioinform. Cheng-Wei Cheng, Emily Chia-Yu Su, Jenn-Kang Hwang, Ting-Yi Sung, Wen-Lian Hsu
2008	J	`jnl`	Protease substrate site predictors derived from machine learning on multilevel substrate phage display data. Bioinform. Ching-Tai Chen, Ei-Wen Yang, Hung-Ju Hsu, Yi-Kun Sun, Wen-Lian Hsu, An-Suei Yang
2008	Misc	`conf`	Result identification for biomedical abstracts using Conditional Random Fields. IRI Ryan T. K. Lin, Hong-Jie Dai, Yue-Yang Bow, Min-Yuh Day, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	J	`jnl`	Semi-automatic conversion of BioProp semantic annotation to PASBio annotation. BMC Bioinform. Richard Tzong-Han Tsai, Hong-Jie Dai, Chi-Hsin Huang, Wen-Lian Hsu
2008	—	`conf`	Semi-joint Labeling for Chinese Named Entity Recognition. AIRS Chia-Wei Wu, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008	C	`conf`	User-centered evaluation of question answering systems. ISI Chorng-Shyong Ong, Min-Yuh Day, Kuo-Tay Chen, Wen-Lian Hsu
2008	—	`conf`	Using "Cited by" Information to Find the Context of Research Papers. ISI Workshops Chun-Hung Lu, Chih-Chien Wang, Min-Yuh Day, Chorng-Shyong Ong, Wen-Lian Hsu
2008	J	`jnl`	Web taxonomy integration with hierarchical shrinkage algorithm and fine-grained relations. Expert Syst. Appl. Chia-Wei Wu, Richard Tzong-Han Tsai, Cheng-Wei Lee, Wen-Lian Hsu
2007	—	`conf`	A Mobile Environment for Chinese Language Learning. HCI (9) Chang-Chih Tseng, Chun-Hung Lu, Wen-Lian Hsu
2007	Misc	`conf`	BESearch: A Supervised Learning Approach to Search for Molecular Event Participants. IRI Richard Tzong-Han Tsai, Hong-Jie Dai, Hsi-Chuan Hung, Ryan T. K. Lin, Wen-Chi Chou, Ying-Shan Su, Min-Yuh Day, Wen-Lian Hsu
2007	J	`jnl`	BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features. BMC Bioinform. Richard Tzong-Han Tsai, Wen-Chi Chou, Ying-Shan Su, Yu-Chun Lin, Cheng-Lung Sung, Hong-Jie Dai, Irene Tzu-Hsuan Yeh, Wei Ku, Ting-Yi Sung, Wen-Lian Hsu
2007	—	`conf`	Chinese-Chinese and English-Chinese Question Answering with ASQA at NTCIR-6 CLQA. NTCIR Cheng-Wei Lee, Min-Yuh Day, Cheng-Lung Sung, Yi-Hsun Lee, Mike Tian-Jian Jiang, Chia-Wei Wu, Cheng-Wei Shih, Yu-Ren Chen, Wen-Lian Hsu
2007	J	`jnl`	Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online). BMC Bioinform. Chun-Nan Hsu, Jin-Mei Lai, Chia-Hung Liu, Huei-Hun Tseng, Chih-Yun Lin, Kuan-Ting Lin, Hsu-Hua Yeh, Ting-Yi Sung, Wen-Lian Hsu, Li-Jen Su, Sheng-An Lee, Chang-Han Chen, Gen-Cher Lee, D. T. Lee, Yow-Ling Shiue, Chang-Wei Yeh, Chao-Hui Chang, Cheng-Yan Kao, Chi-Ying F. Huang
2007	A	`conf`	Exploiting unlabeled internal data in conditional random fields to reduce word segmentation errors for Chinese texts. INTERSPEECH Richard Tzong-Han Tsai, Hsi-Chuan Hung, Hong-Jie Dai, Wen-Lian Hsu
2007	—	`conf`	IASL System for NTCIR-6 Korean-Chinese Cross-Language Information Retrieval. NTCIR Yu-Chun Wang, Cheng-Wei Lee, Richard Tzong-Han Tsai, Wen-Lian Hsu
2007	A*	`conf`	Identifying Protein Interaction Abstracts with Contextual Bag of Words. AAAI Hsieh-Chuan Hung, Richard Tzong-Han Tsai, Wen-Lian Hsu
2007	—	`conf`	Korean-Chinese Cross-Language Information Retrieval Based on Extension of Dictionaries and Transliteration. ROCLING Yu-Chun Wang, Richard Tzong-Han Tsai, Hsu-Chun Yen, Wen-Lian Hsu
2007	C	`conf`	Korean-Chinese Person Name Translation for Cross Language Information Retrieval. PACLIC Yu-Chun Wang, Yi-Hsun Lee, Chu-Cheng Lin, Richard Tzong-Han Tsai, Wen-Lian Hsu
2007	J	`jnl`	LIM-G: Learner-initiating instruction model based on cognitive knowledge for geometry word problem comprehension. Comput. Educ. Wing-Kwong Wong, Sheng-Cheng Hsu, Shih-Hung Wu, Cheng-Wei Lee, Wen-Lian Hsu
2007	J	`jnl`	Protein subcellular localization prediction based on compartment-specific features and structure conservation. BMC Bioinform. Emily Chia-Yu Su, Hua-Sheng Chiu, Allan Lo, Jenn-Kang Hwang, Ting-Yi Sung, Wen-Lian Hsu
2007	Misc	`conf`	Question Classification in English-Chinese Cross-Language Question Answering: An Integrated Genetic Algorithm and Machine Learning Approach. IRI Min-Yuh Day, Chorng-Shyong Ong, Wen-Lian Hsu
2007	J	`jnl`	Reference metadata extraction using a hierarchical knowledge representation framework. Decis. Support Syst. Min-Yuh Day, Richard Tzong-Han Tsai, Cheng-Lung Sung, Chiu-Chen Hsieh, Cheng-Wei Lee, Shih-Hung Wu, Kuen-Pin Wu, Chorng-Shyong Ong, Wen-Lian Hsu
2007	J	`jnl`	The Multi-Q web server for multiplexed protein quantitation. Nucleic Acids Res. Chuan-Yih Yu, Yin-Hao Tsui, Yi-Hwa Yian, Ting-Yi Sung, Wen-Lian Hsu
2006	B	`conf`	A Knowledge-Based Approach to Protein Local Structure Prediction. APBC Ching-Tai Chen, Hsin-Nan Lin, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu
2006	Misc	`conf`	A Two-stage Classifier for Protein B-turn Prediction Using Support Vector Machines. GrC Hua-Sheng Chiu, Hsin-Nan Lin, Allan Lo, Ting-Yi Sung, Wen-Lian Hsu
2006	—	`conf`	BIOSMILE: Adapting Semantic Role Labeling for Biomedical Verbs. BioNLP@NAACL-HLT Richard Tzong-Han Tsai, Wen-Chi Chou, Yu-Chun Lin, Cheng-Lung Sung, Wei Ku, Ying-Shan Su, Ting-Yi Sung, Wen-Lian Hsu
2006	Misc	`conf`	Chinese word segmentation with minimal linguistic knowledge: An improved conditional random fields coupled with character clustering and automatically discovered template matching. IRI Richard Tzong-Han Tsai, Hong-Jie Dai, Hsieh-Chuan Hung, Cheng-Lung Sung, Min-Yuh Day, Wen-Lian Hsu
2006	B	`conf`	Designing a Tutoring Agent for Facilitating Collaborative Learning with Instant Messaging. Intelligent Tutoring Systems Sheng-Cheng Hsu, Min-Yuh Day, Shih-Hung Wu, Wing-Kwong Wong, Wen-Lian Hsu
2006	J	`jnl`	Hyplosp: a Knowledge-based Approach to Protein Local Structure Prediction. J. Bioinform. Comput. Biol. Ching-Tai Chen, Hsin-Nan Lin, Ting-Yi Sung, Wen-Lian Hsu
2006	Misc	`conf`	Integrating genetic algorithms with conditional random fields to enhance question informer prediction. IRI Min-Yuh Day, Chun-Hung Lu, Chorng-Shyong Ong, Shih-Hung Wu, Wen-Lian Hsu
2006	J	`jnl`	Integrating linguistic knowledge into a conditional random fieldframework to identify biomedical named entities. Expert Syst. Appl. Tzong-Han Tsai, Wen-Chi Chou, Shih-Hung Wu, Ting-Yi Sung, Jieh Hsiang, Wen-Lian Hsu
2006	J	`jnl`	NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition. BMC Bioinform. Richard Tzong-Han Tsai, Cheng-Lung Sung, Hong-Jie Dai, Hsieh-Chuan Hung, Ting-Yi Sung, Wen-Lian Hsu
2006	—	`conf`	On Closed Task of Chinese Word Segmentation: An Improved CRF Model Coupled with Character Clustering and Automatically Generated Template Matching. SIGHAN@COLING/ACL Richard Tzong-Han Tsai, Hsieh-Chuan Hung, Cheng-Lung Sung, Hong-Jie Dai, Wen-Lian Hsu
2006	—	`conf`	On Using Ensemble Methods for Chinese Named Entity Recognition. SIGHAN@COLING/ACL Chia-Wei Wu, Shyh-Yi Jan, Richard Tzong-Han Tsai, Wen-Lian Hsu
2006	J	`jnl`	RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. J. Comput. Biol. Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu
2006	B	`conf`	Using Instant Messaging to Provide an Intelligent Learning Environment. Intelligent Tutoring Systems Chun-Hung Lu, Guey-Fa Chiou, Min-Yuh Day, Chorng-Shyong Ong, Wen-Lian Hsu
2006	J	`jnl`	Various criteria in the evaluation of biomedical named entity recognition. BMC Bioinform. Richard Tzong-Han Tsai, Shih-Hung Wu, Wen-Chi Chou, Yu-Chun Lin, Ding He, Jieh Hsiang, Ting-Yi Sung, Wen-Lian Hsu
2006	—	`conf`	Web Directory Integration Using Conditional Random Fields. Web Intelligence Chia-Wei Wu, Wen-Lian Hsu
2005	Misc	`conf`	A Linear Time Algorithm for Finding a Maximal Planar Subgraph Based on PC-Trees. COCOON Wen-Lian Hsu
2005	—	`conf`	A Novel Approach for Prediction of Multi-Labeled Protein Subcellular Localization for Prokaryotic Bacteria. CSB Workshops Emily Chia-Yu Su, Allan Lo, Chin-Chin Lin, Fu Chang, Wen-Lian Hsu
2005	Misc	`conf`	A knowledge-based approach to citation extraction. IRI Min-Yuh Day, Tzong-Han Tsai, Cheng-Lung Sung, Cheng-Wei Lee, Shih-Hung Wu, Chorng-Shyong Ong, Wen-Lian Hsu
2005	—	`conf`	ASQA: Academia Sinica Question Answering System for NTCIR-5 CLQA. NTCIR Cheng-Wei Lee, Cheng-Wei Shih, Min-Yuh Day, Tzong-Han Tsai, Mike Tian-Jian Jiang, Chia-Wei Wu, Cheng-Lung Sung, Yu-Ren Chen, Shih-Hung Wu, Wen-Lian Hsu
2005	B	`conf`	An Empirical Exploration of Using Wiki in an English as a Second Language Course. ICALT Hao-Chuan Wang, Chun-Hung Lu, Jun-Yi Yang, Hsin-Wen Hu, Guey-Fa Chiou, Yueh-Tzu Chiang, Wen-Lian Hsu
2005	—	`conf`	Applying Maximum Entropy to Robust Chinese Shallow Parsing. ROCLING Shih-Hung Wu, Cheng-Wei Shih, Chia-Wei Wu, Tzong-Han Tsai, Wen-Lian Hsu
2005	B	`conf`	Designing an Ontology-Based Intelligent Tutoring Agent with Instant Messaging. ICALT Min-Yuh Day, Chun-Hung Lu, Jin-Tan David Yang, Guey-Fa Chiou, Chorng-Shyong Ong, Wen-Lian Hsu
2005	—	`conf`	Enhance Genomic IR with Term Variation and Expansion: Experience of the IASL Group at Genomic Track 2005. TREC Tsung-Han Tsai, Chia-Wei Wu, Hsieh-Chuan Hung, Yu-Chun Wang, Ding He, Yi-Feng Lin, Cheng-Wei Lee, Ting-Yi Sung, Wen-Lian Hsu
2005	B	`conf`	Exploiting Full Parsing Information to Label Semantic Roles Using an Ensemble of ME and SVM via Integer Linear Programming. CoNLL Tzong-Han Tsai, Chia-Wei Wu, Yu-Chun Lin, Wen-Lian Hsu
2005	—	`conf`	GANAA Genetic Algorithm for NMR Backbone Resonance Assignment. CSB Workshops Hsin-Nan Lin, Kuen-Pin Wu, Jia-Ming Chang, Ting-Yi Sung, Wen-Lian Hsu
2005	J	`jnl`	HYPROSP II-A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence. Bioinform. Hsin-Nan Lin, Jia-Ming Chang, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu
2005	—	`conf`	Learning to Integrate Web Taxonomies with Fine-Grained Relations: A Case Study Using Maximum Entropy Model. AIRS Chia-Wei Wu, Tzong-Han Tsai, Wen-Lian Hsu
2005	—	`conf`	MassTRAQ: a Fully Automated Tool for iTRAQ-labeled Protein Quantification. CSB Workshops Wen-Ting Lin, Kuen-Pin Wu, Wei-Neng Hung, Yi-Hwa Yian, Yet-Ran Chen, Yu-Ju Chen, Ting-Yi Sung, Wen-Lian Hsu
2005	J	`jnl`	Ontological Support in Modeling Learners' Problem Solving Process. J. Educ. Technol. Soc. Chun-Hung Lu, Chia-Wei Wu, Shih-Hung Wu, Guey-Fa Chiou, Wen-Lian Hsu
2005	B	`conf`	RIBRA-An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. RECOMB Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu
2005	B	`conf`	The Design of a Diagnosis System for Problem Posing. ICALT Sheng-Cheng Hsu, Shih-Hung Wu, Wing-Kwong Wong, Hsi-Hsun Yang, Wen-Lian Hsu
2005	—	`conf`	Using Maximum Entropy to Extract Biomedical Named Entities without Dictionaries. IJCNLP (companion) Tzong-Han Tsai, Chia-Wei Wu, Wen-Lian Hsu
2004	—	`conf`	A Maximum Entropy Approach to Biomedical Named Entity Recognition. BIOKDD Yi-Feng Lin, Tzong-Han Tsai, Wen-Chi Chou, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu
2004	C	`conf`	An Iterative Relaxation Technique for the NMR Backbone Assignment Problem. BIBE Wen-Lian Hsu, Jia-Ming Chang, Wen-Chi Chou, Jun-Bo Chen, Kuen-Pin Wu, Ting-Yi Sung, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang
2004	—	`conf`	Applying Meaningful Word-Pair Identifier to the Chinese Syllable-to-Word Conversion Problem. ROCLING Jia-Lin Tsai, Tien-Jien Chiang, Wen-Lian Hsu
2004	J	`jnl`	Auto-Generation of NVEF Knowledge in Chinese. Int. J. Comput. Linguistics Chin. Lang. Process. Jia-Lin Tsai, Gladys Hsieh, Wen-Lian Hsu
2004	J	`jnl`	Mencius: A Chinese Named Entity Recognizer Using the Maximum Entropy-based Hybrid Model. Int. J. Comput. Linguistics Chin. Lang. Process. Tzong-Han Tsai, Shih-Hung Wu, Cheng-Wei Lee, Cheng-Wei Shih, Wen-Lian Hsu
2004	—	`ch.`	PQ Trees, PC Trees, and Planar Graphs. Handbook of Data Structures and Applications Wen-Lian Hsu, Ross M. McConnell
2004	—	`conf`	The Construction of a Chinese Named Entity Tagged Corpus: CNEC1.0. ROCLING Cheng-Wei Shih, Tzong-Han Tsai, Shih-Hung Wu, Chiu-Chen Hsieh, Wen-Lian Hsu
2004	B	`conf`	The Design of An Intelligent Tutoring System Based on the Ontology of Procedural Knowledge. ICALT Chun-Hung Lu, Shih-Hung Wu, LiongYu Tu, Wen-Lian Hsu
2003	—	`conf`	A Clustering Algorithm for Interval Graph Test on Noisy Data. WEA Wei-Fu Lu, Wen-Lian Hsu
2003	—	`conf`	A New Similarity Measure among Protein Sequences. CSB Kuen-Pin Wu, Hsin-Nan Lin, Ting-Yi Sung, Wen-Lian Hsu
2003	J	`jnl`	A Test for the Consecutive Ones Property on Noisy Data - Application to Physical Mapping and Sequence Assembly. J. Comput. Biol. Wei-Fu Lu, Wen-Lian Hsu
2003	—	`conf`	Auto-Discovery of NVEF Word-Pairs in Chinese. ROCLING Jia-Lin Tsai, Gladys Hsieh, Wen-Lian Hsu
2003	—	`conf`	Chinese Word Auto-Confirmation Agent. ROCLING Jia-Lin Tsai, Cheng-Lung Sung, Wen-Lian Hsu
2003	—	`conf`	Domain Event Extraction and Representation with Domain Ontology. IIWeb Shih-Hung Wu, Tzong-Han Tsai, Wen-Lian Hsu
2003	—	`conf`	Mencius: A Chinese Named Entity Recognizer Using Hybrid Model. ROCLING Tzong-Han Tsai, Shih-Hung Wu, Wen-Lian Hsu
2003	J	`jnl`	PC trees and circular-ones arrangements. Theor. Comput. Sci. Wen-Lian Hsu, Ross M. McConnell
2003	—	`conf`	Text categorization using automatically acquired domain ontology. IRAL Shih-Hung Wu, Tzong-Han Tsai, Wen-Lian Hsu
2002	C	`conf`	A Cognitive Student Model - An Ontological Approach. ICCE LiongYu Tu, Wen-Lian Hsu, Shih-Hung Wu
2002	J	`jnl`	A Simple Test for the Consecutive Ones Property. J. Algorithms Wen-Lian Hsu
2002	B	`conf`	Applying an NVEF Word-Pair Identifier to the Chinese Syllable-to-Word Conversion Problem. COLING Jia-Lin Tsai, Wen-Lian Hsu
2002	C	`conf`	Exploiting Knowledge Representation in an Intelligent Tutoring System for English Lexical Errors. ICCE Chiu-Chen Hsieh, Tzong-Han Tsai, David Wible, Wen-Lian Hsu
2002	C	`conf`	NTUs: An Intelligent Tutorial System Fosters Number Concepts through Computational Scaffolding. ICCE Chih-Wei Hue, Chien-Huei Kao, Ming Lo, Chien-Chih Chiang, LiongYu Tu, Wen-Lian Hsu
2002	B	`conf`	SOAT: A Semi-Automatic Domain Ontology Acquisition Tool from Chinese Corpus. COLING Shih-Hung Wu, Wen-Lian Hsu
2002	J	`jnl`	Word Sense Disambiguation and Sense-Based NV Event Frame. Int. J. Comput. Linguistics Chin. Lang. Process. Jia-Lin Tsai, Wen-Lian Hsu, Jeng-Woei Su
2001	B	`conf`	Event identification based on the information map-INFOMAP. SMC Wen-Lian Hsu, Shih-Hung Wu, Yi-Shiou Chen
2001	Misc	`conf`	PC-Trees vs. PQ-Trees. COCOON Wen-Lian Hsu
2001	J	`jnl`	Selected papers from COCOON 1998 - Foreword. Theor. Comput. Sci. Wen-Lian Hsu, Ming-Yang Kao
2000	A	`conf`	Semantic Search on Internet Tabular Information Extraction for Answering Queries. CIKM Huei-Long Wang, Shih-Hung Wu, K. K. Wang, Cheng-Lung Sung, Wen-Lian Hsu, Wei-Kuan Shih
1999	J	`jnl`	A New Planarity Test. Theor. Comput. Sci. Wei-Kuan Shih, Wen-Lian Hsu
1999	J	`jnl`	Fast and Simple Algorithms for Recognizing Chordal Comparability Graphs and Interval Graphs. SIAM J. Comput. Wen-Lian Hsu, Tze-Heng Ma
1999	—	`conf`	Personal Navigating Agents. Agents Huei-Long Wang, Wei-Kuan Shih, C. N. Hsu, Y. S. Chen, Y. L. Wang, Wen-Lian Hsu
1998	Misc	`ed.`	Computing and Combinatorics, 4th Annual International Conference, COCOON '98, Taipei, Taiwan, R.o.C., August 12-14, 1998, Proceedings COCOON Wen-Lian Hsu, Ming-Yang Kao
1998	B	`conf`	Empirical study of Mandarin Chinese discourse analysis: an event-based approach. ICTAI Yuan-Kai Wang, Yi-Shiou Chen, Wen-Lian Hsu
1998	A*	`conf`	Personal Browser. SIGIR Yi-Shiou Chen, Schy Chiou, Yuan-Kai Wang, Wen-Lian Hsu
1998	—	`conf`	結合統計與規則的多層次中文斷詞系統 (A hierarchical Chinese word segmentation system based on statistical and rule-based methods) [In Chinese]. ROCLING (2) Chung-Chen Chen, Wen-Lian Hsu
1997	Misc	`conf`	On Physical Mapping Algorithms - An Error-Tolerant Test for the Consecutive Ones Property. COCOON Wen-Lian Hsu
1995	B	`conf`	A Linear Time Algorithm For Finding Maximal Planar Subgraphs. ISAAC Wen-Lian Hsu
1995	J	`jnl`	Independent Sets in Circular-Arc Graphs. J. Algorithms Wen-Lian Hsu, Jeremy P. Spinrad
1995	J	`jnl`	O(M*N) Algorithms for the Recognition and Isomorphism Problems on Circular-Arc Graphs. SIAM J. Comput. Wen-Lian Hsu
1995	—	`conf`	On-Line Recognition of Interval Graphs in Combinatorics and Computer Science Wen-Lian Hsu
1993	J	`jnl`	Fast Algorithms for the Dominating Set Problem on Permutation Graphs. Algorithmica Kuo-Hui Tsai, Wen-Lian Hsu
1993	A	`conf`	Stroke segmentation as a basis for structural matching of Chinese characters. ICDAR Fu Chang, Ying-Chu Chen, Hon-Son Don, Wen-Lian Hsu, Ching-I Kao
1992	B	`conf`	A Simple Test for Interval Graphs. WG Wen-Lian Hsu
1992	B	`conf`	A Simple Test for the Consecutive Ones Property. ISAAC Wen-Lian Hsu
1992	J	`jnl`	An O(n² log n) Algorithm for the Hamiltonian Cycle Problem on Circular-Arc Graphs. SIAM J. Comput. Wei-Kuan Shih, T. C. Chern, Wen-Lian Hsu
1991	—	`ed.`	ISA '91 Algorithms, 2nd International Symposium on Algorithms, Taipei, Republic of China, December 16-18, 1991, Proceedings ISA Wen-Lian Hsu, Richard C. T. Lee
1991	J	`jnl`	Linear Time Algorithms on Circular-Arc Graphs. Inf. Process. Lett. Wen-Lian Hsu, Kuo-Hui Tsai
1991	—	`conf`	Substitution Decomposition on Chordal Graphs and Applications. ISA Wen-Lian Hsu, Tze-Heng Ma
1990	—	`conf`	Fast Algorithms for the Dominating Set Problem on Permutation Graphs. SIGAL International Symposium on Algorithms Kuo-Hui Tsai, Wen-Lian Hsu
1990	B	`conf`	O(m\cdotn) Isomorphism Algorithms for Circular-Arc Graphs and Circle Graphs. IPCO Wen-Lian Hsu
1989	J	`jnl`	An O(n Discret. Appl. Math. Wei-Kuan Shih, Wen-Lian Hsu
1989	J	`jnl`	An O(n log n+m log log n) Maximum Weight Clique Algorithm for Circular-Arc Graphs. Inf. Process. Lett. Wei-Kuan Shih, Wen-Lian Hsu
1989	J	`jnl`	Recognizing circle graphs in polynomial time. J. ACM Csaba P. Gabor, Kenneth J. Supowit, Wen-Lian Hsu
1988	J	`jnl`	The coloring and maximum independent set problems on planar perfect graphs. J. ACM Wen-Lian Hsu
1987	J	`jnl`	Decomposition of perfect graphs. J. Comb. Theory B Wen-Lian Hsu
1987	J	`jnl`	Recognizing planar perfect graphs. J. ACM Wen-Lian Hsu
1986	J	`jnl`	Coloring planar perfect graphs by decomposition. Comb. Wen-Lian Hsu
1985	J	`jnl`	Maximum Weight Clique Algorithms for Circular-Arc Graphs and Circle Graphs. SIAM J. Comput. Wen-Lian Hsu
1985	A*	`conf`	Recognizing Circle Graphs in Polynomial Time FOCS Csaba P. Gabor, Wen-Lian Hsu, Kenneth J. Supowit
1984	J	`jnl`	Approximation Algorithms for the Assembly Line Crew Scheduling Problem. Math. Oper. Res. Wen-Lian Hsu
1984	J	`jnl`	On the maximum empty rectangle problem. Discret. Appl. Math. Amnon Naamad, D. T. Lee, Wen-Lian Hsu
1982	J	`jnl`	A polynomial algorithm for the minimum weighted clique cover problem on claw-free perfect graphs. Discret. Math. Wen-Lian Hsu, George L. Nemhauser
1982	J	`jnl`	The distance-domination numbers of trees. Oper. Res. Lett. Wen-Lian Hsu
1981	J	`jnl`	A polynomial algorithm for maximum weighted vertex packings on graphs without long odd cycles. Math. Program. Wen-Lian Hsu, Yoshiro Ikura, George L. Nemhauser
1981	J	`jnl`	Algorithms for minimum covering by cliques and maximum clique in claw-free perfect graphs. Discret. Math. Wen-Lian Hsu, George L. Nemhauser
1979	J	`jnl`	Easy and hard bottleneck location problems. Discret. Appl. Math. Wen-Lian Hsu, George L. Nemhauser