Wei Chen

26 papers A* 1A 1B 3Misc 1Journal 19Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Enhancing privacy in biosecurity with watermarked protein design.
Bioinform.
Yanshuo Chen, Zhengmian Hu, Yihan Wu, Ruibo Chen, Yongrui Jin, Marcus Zhan, Chengjin Xie, Wei Chen, Heng Huang
2025 J jnl
Fast and scalable Wasserstein-1 neural optimal transport solver for single-cell perturbation prediction.
Bioinform.
Yanshuo Chen, Zhengmian Hu, Wei Chen, Heng Huang
2023 J jnl
Dynamic Prediction using Time-Dependent Cox Survival Neural Network.
CoRR
Lang Zeng, Jipeng Zhang, Wei Chen, Ying Ding
2023 A conf
PTEase: Objective Airway Examination for Pulmonary Telemedicine using Commodity Smartphones.
MobiSys
Xiangyu Yin, Kai Huang, Erick Forno, Wei Chen, Heng Huang, Wei Gao
2022 B conf
Multi-modal Genotype and Phenotype Mutual Learning to Enhance Single-Modal Input Based Longitudinal Outcome Prediction.
RECOMB
Alireza Ganjdanesh, Jipeng Zhang, Wei Chen, Heng Huang
2022 J jnl
Multimodal Genotype and Phenotype Data Integration to Improve Partial Data-Based Longitudinal Prediction.
J. Comput. Biol.
Alireza Ganjdanesh, Jipeng Zhang, Sarah Yan, Wei Chen, Heng Huang
2022 Misc conf
Out-Clinic Pulmonary Disease Evaluation via Acoustic Sensing and Multi-Task Learning on Commodity Smartphones.
SenSys
Xiangyu Yin, Kai Huang, Erick Forno, Wei Chen, Heng Huang, Wei Gao
2022 J jnl
Robust and accurate estimation of cellular fraction from tissue omics data via ensemble deconvolution.
Bioinform.
Manqi Cai, Molin Yue, Tianmeng Chen, Jinling Liu, Erick Forno, Xinghua Lu, Timothy Billiar, Juan C. Celedón, Chris McKennan, Wei Chen, Jiebiao Wang
2021 J jnl
CHIT: an allele-specific method for testing the association between molecular quantitative traits and phenotype-genotype interaction.
Bioinform.
Qi Yan, Erick Forno, Juan C. Celedón, Wei Chen, Daniel E. Weeks
2021 J jnl
Deep Large-Scale Multitask Learning Network for Gene Expression Inference.
J. Comput. Biol.
Kamran Ghasedi Dizaji, Wei Chen, Heng Huang
2020 J jnl
Artificial-cell-type aware cell-type classification in CITE-seq.
Bioinform.
Qiuyu Lian, Hongyi Xin, Jianzhu Ma, Liza Konnikova, Wei Chen, Jin Gu, Kong Chen
2020 J jnl
CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples.
Bioinform.
Yu Liu, Paul W. Bible, Bin Zou, Qiaoxing Liang, Cong Dong, Xiaofeng Wen, Yan Li, Xiaofei Ge, Xifang Li, Xiuli Deng, Rong Ma, Shixin Guo, Juanran Liang, Tingting Chen, Wenliang Pan, Lixin Liu, Wei Chen, Xueqin Wang, Lai Wei
2020 B conf
Deep Large-Scale Multi-task Learning Network for Gene Expression Inference.
RECOMB
Kamran Ghasedi Dizaji, Wei Chen, Heng Huang
2020 J jnl
Deep-learning-based prediction of late age-related macular degeneration progression.
Nat. Mach. Intell.
Qi Yan, Daniel E. Weeks, Hongyi Xin, Anand Swaroop, Emily Y. Chew, Heng Huang, Ying Ding, Wei Chen
2020 A* conf
SpiroSonic: monitoring human lung function via acoustic sensing on commodity smartphones.
MobiCom
Xingzhe Song, Boyuan Yang, Ge Yang, Ruirong Chen, Erick Forno, Wei Chen, Wei Gao
2019 B conf
Device-Free Acoustic Motion Tracking over Targets with Large Sizes.
MASS
Yuqi Li, Ruirong Chen, Xingzhe Song, Wei Gao, Wei Chen, Erick Forno
2018 J jnl
Bayesian integrative model for multi-omics data with missingness.
Bioinform.
Zhou Fang, Tianzhou Ma, Gong Tang, Li Zhu, Qi Yan, Ting Wang, Juan C. Celedón, Wei Chen, George C. Tseng
2018 J jnl
DIMM-SC: a Dirichlet mixture model for clustering droplet-based single cell transcriptomic data.
Bioinform.
Zhe Sun, Ting Wang, Ke Deng, Xiao-Feng Wang, Robert Lafyatis, Ying Ding, Ming Hu, Wei Chen
2018 J jnl
KMgene: a unified R package for gene-based association analysis for complex traits.
Bioinform.
Qi Yan, Zhou Fang, Wei Chen
2018 J jnl
SILGGM: An extensive R package for efficient statistical inference in large-scale gene networks.
PLoS Comput. Biol.
Rong Zhang, Zhao Ren, Wei Chen
2016 J jnl
A computational method for genotype calling in family-based sequencing data.
BMC Bioinform.
Lun-Ching Chang, Bingshan Li, Zhou Fang, Scott Vrieze, Matthew McGue, William G. Iacono, George C. Tseng, Wei Chen
2016 — conf
An integrative analysis of ATAC-seq and RNA-seq data in activated, CD4+CD45RO+CD196+ human T cells treated with IL-1B and IL-23 with or without PGE2.
BCB
Ting Wang, Richard H. Duerr, Wei Chen
2016 J jnl
FastGGM: An Efficient Algorithm for the Inference of Gaussian Graphical Model in Biological Networks.
PLoS Comput. Biol.
Ting Wang, Zhao Ren, Ying Ding, Zhou Fang, Zhe Sun, Matthew L. MacDonald, Robert A. Sweet, Jieru Wang, Wei Chen
2015 J jnl
A Bayesian framework for
Bioinform.
Qiang Wei, Xiaowei Zhan, Xue Zhong, Yongzhuang Liu, Yujun Han, Wei Chen, Bingshan Li
2015 J jnl
A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis.
Bioinform.
Rui Chen, Qiang Wei, Xiaowei Zhan, Xue Zhong, James S. Sutcliffe, Nancy J. Cox, Edwin H. Cook Jr., Chun Li, Wei Chen, Bingshan Li
2015 J jnl
DISSCO: direct imputation of summary statistics allowing covariates.
Bioinform.
Zheng Xu, Qing Duan, Song Yan, Wei Chen, Mingyao Li, Ethan M. Lange, Yun Li