Wanwen Zeng - RankMe

15 papers Journal 13Unranked 2

Year	Rank	Type	Title / Venue / Authors
2024	—	`conf`	Inferring Gene Regulatory Network Based on scATAC-seq Data with Gene Perturbation. BIBM Wei Shao, Yuti Liu, Shuang Zhang, Shuang Chen, Qiao Liu, Jianyu Zhou, Wanwen Zeng
2023	J	`jnl`	Deep generative modeling and clustering of single cell Hi-C data. Briefings Bioinform. Qiao Liu, Wanwen Zeng, Wei Zhang, Sicheng Wang, Hongyang Chen, Rui Jiang, Mu Zhou, Shaoting Zhang
2023	J	`jnl`	DeepDrug: A general graph-based deep learning framework for drug-drug interactions and drug-target interactions prediction. Quant. Biol. Qijin Yin, Rui Fan, Xusheng Cao, Qiao Liu, Rui Jiang, Wanwen Zeng
2023	J	`jnl`	HiChIPdb: a comprehensive database of HiChIP regulatory interactions. Nucleic Acids Res. Wanwen Zeng, Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong
2022	J	`jnl`	scGraph: a graph neural network-based approach to automatically identify cell types. Bioinform. Qijin Yin, Qiao Liu, Zhuoran Fu, Wanwen Zeng, Boheng Zhang, Xuegong Zhang, Rui Jiang, Hairong Lv
2021	J	`jnl`	SilencerDB: a comprehensive database of silencers. Nucleic Acids Res. Wanwen Zeng, Shengquan Chen, Xuejian Cui, Xiaoyang Chen, Zijing Gao, Rui Jiang
2020	J	`jnl`	IRIS: A method for predicting in vivo RNA secondary structures using PARIS data. Quant. Biol. Jianyu Zhou, Pan Li, Wanwen Zeng, Wenxiu Ma, Zhipeng Lu, Rui Jiang, Qiangfeng Cliff Zhang, Tao Jiang
2020	J	`jnl`	Integrating distal and proximal information to predict gene expression via a densely connected convolutional neural network. Bioinform. Wanwen Zeng, Yong Wang, Rui Jiang
2019	J	`jnl`	EnDisease: a manually curated database for enhancer-disease associations. Database J. Biol. Databases Curation Wanwen Zeng, Xu Min, Rui Jiang
2018	J	`jnl`	Prediction of enhancer-promoter interactions via natural language processing. BMC Genom. Wanwen Zeng, Mengmeng Wu, Rui Jiang
2017	J	`jnl`	Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding. Bioinform. Xu Min, Wanwen Zeng, Ning Chen, Ting Chen, Rui Jiang
2017	—	`conf`	Integrating embeddings of multiple gene networks to prioritize complex disease-associated genes. BIBM Mengmeng Wu, Wanwen Zeng, Wenqiang Liu, Yijia Zhang, Ting Chen, Rui Jiang
2017	J	`jnl`	Mimvec: a deep learning approach for analyzing the human phenome. BMC Syst. Biol. Mingxin Gan, Wenran Li, Wanwen Zeng, Xiaojian Wang, Rui Jiang
2017	J	`jnl`	Predicting enhancers with deep convolutional neural networks. BMC Bioinform. Xu Min, Wanwen Zeng, Shengquan Chen, Ning Chen, Ting Chen, Rui Jiang
2016	J	`jnl`	dbWGFP: a database and web server of human whole-genome single nucleotide variants and their functional predictions. Database J. Biol. Databases Curation Jiaxin Wu, Mengmeng Wu, Lianshuo Li, Zhuo Liu, Wanwen Zeng, Rui Jiang