Vít Novácek - RankMe

58 papers A 1B 9C 1Misc 7Journal 22Unranked 15

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Computing patient similarity based on unstructured clinical notes. CoRR Petr Zelina, Marko Rehácek, Jana Halámková, Lucia Bohovicová, Martin Rusinko, Vít Novácek
2025	—	`conf`	Computing Patient Similarity Based on Unstructured Clinical Notes. TSD (2) Petr Zelina, Marko Rehácek, Jana Halámková, Lucia Bohovicová, Martin Rusinko, Vít Novácek
2025	J	`jnl`	Evaluating Open-Weight Large Language Models for Structured Data Extraction from Narrative Medical Reports Across Multiple Use Cases and Languages. CoRR Douwe J. Spaanderman, Karthik Prathaban, Petr Zelina, Kaouther Mouheb, Lukás Hejtmánek, Matthew Marzetti, Antonius W. Schurink, Damian Chan, Ruben Niemantsverdriet, Frederik Hartmann, Zhen Qian, Maarten G. Thomeer, Petr Holub, Farhan Akram, Frank J. Wolters, Meike W. Vernooij, Cornelis Verhoef, Esther E. Bron, Vít Novácek, Dirk J. Grünhagen, Wiro J. Niessen, Martijn P. A. Starmans, Stefan Klein
2025	J	`jnl`	Integration, Cataloguing and Management of Biobanking and Clinical Data Using FAIR Genomes Metadata Schema. Data Intell. Radoslava Kacová, Tomás Houfek, Ondrej Horký, Jan Kurán, Radovan Tomásik, Michal Ruzicka, Roman Hrstka, Vít Novácek, Zdenka Dudová
2025	J	`jnl`	Large language model vs. traditional machine learning: Evaluating predictive models for early detection of tumor relapse. Expert Syst. Appl. Mohan Timilsina, Samuele Buosi, Maria Torrente, Mariano Provencio, Manuel Cobo, Delvys Rodriguez Abreu, Rafael Castro, Enric Carcereny, Edward Curry, Vít Novácek
2024	J	`jnl`	Boosting predictive models and augmenting patient data with relevant genomic and pathway information. Comput. Biol. Medicine Samuele Buosi, Mohan Timilsina, Maria Torrente, Mariano Provencio, Dirk Fey, Vít Novácek
2024	J	`jnl`	Machine learning estimated probability of relapse in early-stage non-small-cell lung cancer patients with aneuploidy imputation scores and knowledge graph embeddings. Expert Syst. Appl. Samuele Buosi, Mohan Timilsina, Adrianna Janik, Luca Costabello, Maria Torrente, Mariano Provencio, Dirk Fey, Vít Novácek
2023	B	`conf`	Machine Learning Survival Models for Relapse Prediction in a Early Stage Lung Cancer Patient. IJCNN Mohan Timilsina, Samuele Buosi, Adrianna Janik, Pasquale Minervini, Luca Costabello, Maria Torrente, Mariano Provencio, Virginia Calvo, Carlos Camps, Ana L. Ortega, Bartomeu Massutí, M. Rosario Garcia Campelo, Edel del Barco, Joaquim Bosch-Barrera, Vít Novácek
2023	J	`jnl`	Synergy between imputed genetic pathway and clinical information for predicting recurrence in early stage non-small cell lung cancer. J. Biomed. Informatics Mohan Timilsina, Dirk Fey, Samuele Buosi, Adrianna Janik, Luca Costabello, Enric Carcereny, Delvys Rodriguez Abreu, Manuel Cobo, Rafael Castro, Reyes Bernabé, Pasquale Minervini, Maria Torrente, Mariano Provencio, Vít Novácek
2023	—	`conf`	Unsupervised extraction, classification and visualization of clinical note segments using the MIMIC-III dataset. BIBM Petr Zelina, Jana Halámková, Vít Novácek
2022	J	`jnl`	Boundary heat diffusion classifier for a semi-supervised learning in a multilayer network embedding. Neural Networks Mohan Timilsina, Vít Novácek, Mathieu d'Aquin, Haixuan Yang
2022	Misc	`conf`	Integration of Clinical Information and Imputed Aneuploidy Scores to Enhance Relapse Prediction in Early Stage Lung Cancer Patients. AMIA Mohan Timilsina, Samuele Bousi, Dirk Fey, Adrianna Janik, Maria Torrente, Mariano Provencio, Alberto Bermúdez, Enric Carcereny, Luca Costabello, Delvys Rodriguez Abreu, Manuel Cobo, Rafael Castro, Reyes Bernabé, Maria Guirado, Pasquale Minervini, Vít Novácek
2022	J	`jnl`	Machine Learning-Assisted Recurrence Prediction for Early-Stage Non-Small-Cell Lung Cancer Patients. CoRR Adrianna Janik, Maria Torrente, Luca Costabello, Virginia Calvo, Brian Walsh, Carlos Camps, Sameh K. Mohamed, Ana L. Ortega, Vít Novácek, Bartomeu Massutí, Pasquale Minervini, M. Rosario Garcia Campelo, Edel del Barco, Joaquim Bosch-Barrera, Ernestina Menasalvas, Mohan Timilsina, Mariano Provencio
2022	—	`conf`	Unsupervised extraction, labelling and clustering of segments from clinical notes. BIBM Petr Zelina, Jana Halámková, Vít Novácek
2022	J	`jnl`	Unsupervised extraction, labelling and clustering of segments from clinical notes. CoRR Petr Zelina, Jana Halámková, Vít Novácek
2021	J	`jnl`	Biological applications of knowledge graph embedding models. Briefings Bioinform. Sameh K. Mohamed, Aayah Nounu, Vít Novácek
2021	Misc	`conf`	On Predicting Recurrence in Early Stage Non-small Cell Lung Cancer. AMIA Sameh K. Mohamed, Brian Walsh, Mohan Timilsina, Vít Novácek, Maria Torrente, Fabio Franco, Mariano Provencio, Adrianna Janik, Luca Costabello, Pontus Stenetorp, Pasquale Minervini
2021	J	`jnl`	On Training Knowledge Graph Embedding Models. Inf. Sameh K. Mohamed, Emir Muñoz, Vít Novácek
2020	J	`jnl`	Accurate prediction of kinase-substrate networks using knowledge graphs. PLoS Comput. Biol. Vít Novácek, Gavin McGauran, David Matallanas, Adrián Vallejo Blanco, Piero Conca, Emir Muñoz, Luca Costabello, Kamalesh Kanakaraj, Muhammad Zeeshan Nawaz, Brian Walsh, Sameh K. Mohamed, Pierre-Yves Vandenbussche, Colm J. Ryan, Walter Kolch, Dirk Fey
2020	A	`conf`	BioKG: A Knowledge Graph for Relational Learning On Biological Data. CIKM Brian Walsh, Sameh K. Mohamed, Vít Novácek
2020	J	`jnl`	Discovering protein drug targets using knowledge graph embeddings. Bioinform. Sameh K. Mohamed, Vít Novácek, Aayah Nounu
2019	Misc	`conf`	Drug target discovery using knowledge graph embeddings. SAC Sameh K. Mohamed, Aayah Nounu, Vít Novácek
2019	J	`jnl`	Facilitating prediction of adverse drug reactions by using knowledge graphs and multi-label learning models. Briefings Bioinform. Emir Muñoz, Vít Novácek, Pierre-Yves Vandenbussche
2019	B	`conf`	Link Prediction Using Multi Part Embeddings. ESWC Sameh K. Mohamed, Vít Novácek
2019	—	`conf`	Loss Functions in Knowledge Graph Embedding Models. DL4KG@ESWC Sameh K. Mohamed, Vít Novácek, Pierre-Yves Vandenbussche, Emir Muñoz
2019	—	`ed.`	Proceedings of the Workshop on Semantic Web Solutions for Large-Scale Biomedical Data Analytics co-located with 18th International Semantic Web Conference (ISWC 2019), Auckland, New Zealand, October 27th, 2019. SeWeBMeDa@ISWC Ali Hasnain, Vít Novácek, Michel Dumontier, Dietrich Rebholz-Schuhmann
2018	J	`jnl`	Finding Explanations of Entity Relatedness in Graphs: A Survey. CoRR Raoul Biagioni, Pierre-Yves Vandenbussche, Vít Novácek
2018	Misc	`conf`	Knowledge base completion using distinct subgraph paths. SAC Sameh K. Mohamed, Vít Novácek, Pierre-Yves Vandenbussche
2017	C	`conf`	Identifying Equivalent Relation Paths in Knowledge Graphs. LDK Sameh K. Mohamed, Emir Muñoz, Vít Novácek, Pierre-Yves Vandenbussche
2017	—	`conf`	Regularizing Knowledge Graph Embeddings via Equivalence and Inversion Axioms. ECML/PKDD (1) Pasquale Minervini, Luca Costabello, Emir Muñoz, Vít Novácek, Pierre-Yves Vandenbussche
2016	Misc	`conf`	Using Drug Similarities for Discovery of Possible Adverse Reactions. AMIA Emir Muñoz, Vít Novácek, Pierre-Yves Vandenbussche
2015	J	`jnl`	Formalising Hypothesis Virtues in Knowledge Graphs: A General Theoretical Framework and its Validation in Literature-Based Discovery Experiments. CoRR Vít Novácek
2014	B	`conf`	A Method for Building Burst-Annotated Co-Occurrence Networks for Analysing Trends in Textual Data. LREC Yutaka Mitsuishi, Vít Novácek, Pierre-Yves Vandenbussche
2014	J	`jnl`	A Methodology for Empirical Analysis of LOD Datasets. CoRR Vít Novácek
2014	—	`conf`	SemanTex: Semantic Text Exploration Using Document Links Implied by Conceptual Networks Extracted from the Texts. ISWC (Posters & Demos) Suad Aldarra, Emir Muñoz, Pierre-Yves Vandenbussche, Vít Novácek
2013	B	`conf`	Linking the scientific and clinical data with KI2NA-LHC - An outline. CBMS Vít Novácek, Aisha Naseer
2013	—	`conf`	SKIMMR: machine-aided skim-reading. IUI Companion Vít Novácek, Gully Burns
2013	J	`jnl`	Technical report: Linking the scientific and clinical data with KI2NA-LHC CoRR Vít Novácek, Aisha Naseer
2012	J	`jnl`	Distributional Framework for Emergent Knowledge Acquisition and its Application to Automated Document Annotation CoRR Vít Novácek
2012	—	`ed.`	Proceedings of the 2nd Joint Workshop on Knowledge Evolution and Ontology Dynamics, Boston, MA, USA, November 12, 2012 EvoDyn@ISWC Tudor Groza, Dimitris Plexousakis, Vít Novácek
2011	—	`conf`	Getting the Meaning Right: A Complementary Distributional Layer for the Web Semantics. ISWC (1) Vít Novácek, Siegfried Handschuh, Stefan Decker
2010	—	`conf`	Biomedical Publication Knowledge Acquisition, Processing and Dissemination with CORAAL. OTM Conferences (2) Vít Novácek, Siegfried Handschuh
2010	J	`jnl`	CORAAL - Dive into publications, bathe in the knowledge. J. Web Semant. Vít Novácek, Tudor Groza, Siegfried Handschuh, Stefan Decker
2010	—	`ch.`	Towards Knowledge-Based Life Science Publication Repositories. Semantic e-Science Vít Novácek, Tudor Groza, Siegfried Handschuh
2009	B	`conf`	CORAAL - Towards Deep Exploitation of Textual Resources in Life Sciences. AIME Vít Novácek, Tudor Groza, Siegfried Handschuh
2009	B	`conf`	Knowledge-based search for oncological literature. CBMS Vít Novácek, Tudor Groza, Siegfried Handschuh
2009	Misc	`conf`	Towards Lightweight and Robust Large Scale Emergent Knowledge Processing. ISWC Vít Novácek, Stefan Decker
2008	—	`conf`	EUREEKA: Deepening the Semantic Web by More Efficient Emergent Knowledge Representation and Processing. ISWC (Posters & Demos) Vít Novácek
2008	J	`jnl`	Infrastructure for dynamic knowledge integration - Automated biomedical ontology extension using textual resources. J. Biomed. Informatics Vít Novácek, Loredana Laera, Siegfried Handschuh, Brian Davis
2008	—	`conf`	Relaxing the Basic KR&R Principles to Meet the Emergent Semantic Web! URSW Vít Novácek
2007	—	`conf`	Automatic Knowledge Acquisition and Integration Technique: Application to Large Scale Taxonomy Extraction and Document Annotation. ICEIS (Selected Papers) Vít Novácek
2007	Misc	`conf`	Extending Community Ontology Using Automatically Generated Suggestions. FLAIRS Vít Novácek, Maciej Dabrowski, Sebastian Ryszard Kruk, Siegfried Handschuh
2007	—	`conf`	Imprecise Empirical Ontology Refinement - Application to Taxonomy Acquisition. ICEIS (2) Vít Novácek
2007	—	`conf`	Inferential Ontology Learning. KWEPSY Vít Novácek
2006	B	`conf`	Empirical Merging of Ontologies - A Proposal of Universal Uncertainty Representation Framework. ESWC Vít Novácek, Pavel Smrz
2006	B	`conf`	Ontology Acquisition for Automatic Building of Scientific Portals. SOFSEM Pavel Smrz, Vít Novácek
2006	B	`conf`	Text Mining for Semantic Relations as a Support Base of a Scientific Portal Generator. LREC Vít Novácek, Pavel Smrz, Jan Pomikálek
2005	—	`conf`	OLE - A New Ontology Learning Platform. RANLP Text Mining Workshop Vít Novácek, Pavel Smrz