Volker Brendel

29 papers Journal 22Unranked 7
YearRankTypeTitle / Venue / Authors
2011 J jnl
The BioExtract Server: a web-based bioinformatic workflow platform.
Nucleic Acids Res.
Carol Lushbough, Douglas M. Jennewein, Volker Brendel
2010 J jnl
BioExtract Server - An Integrated Workflow-Enabling System to Access and Analyze Heterogeneous, Distributed Biomolecular Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
2009 J jnl
Common introns within orthologous genes: software and application to plants.
Briefings Bioinform.
Matthew D. Wilkerson, Yuanbin Ru, Volker Brendel
2008 — conf
An Overview of the BioExtract Server - a Distributed, Web Based Application for Bioinformatic Analysis.
BIOCOMP
Carol Lushbough, Volker Brendel
2008 J jnl
Implementing bioinformatic workflows within the BioExtract Server.
Int. J. Comput. Biol. Drug Des.
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
2008 J jnl
MetWAMer: eukaryotic translation initiation site prediction.
BMC Bioinform.
Michael E. Sparks, Volker Brendel
2008 — conf
Pairwise Statistical Significance Versus Database Statistical Significance for Local Alignment of Protein Sequences.
ISBRA
Ankit Agrawal, Volker Brendel, Xiaoqiu Huang
2008 J jnl
Pairwise statistical significance and empirical determination of effective gap opening penalties for protein local sequence alignment.
Int. J. Comput. Biol. Drug Des.
Ankit Agrawal, Volker Brendel, Xiaoqiu Huang
2008 J jnl
PlantGDB: a resource for comparative plant genomics.
Nucleic Acids Res.
Jon Duvick, Ann Fu, Usha Muppirala, Mukul Sabharwal, Matthew D. Wilkerson, Carolyn J. Lawrence, Carol Lushbough, Volker Brendel
2008 — conf
TableMaker: An ad hoc Query Tool for Relational Databases.
BIOCOMP
Carol Lushbough, Jon Duvick, Qunfeng Dong, Douglas M. Jennewein, Joe Reynoldson, Volker Brendel
2007 — conf
Creating Bioinformatic Workflows within the BioExtract Server.
BIOCOMP
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
2007 — conf
Markov Model Variants for Appraisal of Coding Potential in Plant DNA.
ISBRA
Michael E. Sparks, Volker Brendel, Karin S. Dorman
2005 J jnl
Engineering a software tool for gene structure prediction in higher organisms.
Inf. Softw. Technol.
Gordon Gremme, Volker Brendel, Michael E. Sparks, Stefan Kurtz
2005 J jnl
Incorporation of splice site probability models for non-canonical introns improves gene structure prediction in plants.
Bioinform.
Michael E. Sparks, Volker Brendel
2005 J jnl
SynBrowse: a synteny browser for comparative sequence analysis.
Bioinform.
Xiaokang Pan, Lincoln Stein, Volker Brendel
2004 J jnl
Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
Bioinform.
Volker Brendel, Liqun Xing, Wei Zhu
2004 J jnl
MaizeGDB, the community database for maize genetics and genomics.
Nucleic Acids Res.
Carolyn J. Lawrence, Qunfeng Dong, Mary L. Polacco, Trent E. Seigfried, Volker Brendel
2004 J jnl
PlantGDB, plant genome database and analysis tools.
Nucleic Acids Res.
Qunfeng Dong, Shannon D. Schlueter, Volker Brendel
2003 J jnl
GeneSeqer add PlantGDB: gene structure prediction in plant genomes.
Nucleic Acids Res.
Shannon D. Schlueter, Qunfeng Dong, Volker Brendel
2003 J jnl
Space and time efficient parallel algorithms and software for EST clustering.
IEEE Trans. Parallel Distributed Syst.
Anantharaman Kalyanaraman, Srinivas Aluru, Volker Brendel, Suresh C. Kothari
2003 J jnl
ZmDB, an integrated database for maize genome research.
Nucleic Acids Res.
Qunfeng Dong, Laura Roy, Michael Freeling, Virginia Walbot, Volker Brendel
2002 J jnl
Gene structure identification with MyGV using cDNA evidence and protein homologs to improve ab initio predictions.
Bioinform.
Wei Zhu, Volker Brendel
2002 — conf
Integration of Data Management and Analysis for Genome Research.
GI Jahrestagung (Ergänzungsband)
Volker Brendel
2001 J jnl
Multi-query sequence BLAST output examination with MuSeqBox.
Bioinform.
Liqun Xing, Volker Brendel
2000 J jnl
Gene discovery using the maize genome database ZmDB.
Nucleic Acids Res.
Xiaowu Gai, Shailesh Lal, Liqun Xing, Volker Brendel, Virginia Walbot
2000 J jnl
Optimal spliced alignment of homologous cDNA to a genomic DNA template.
Bioinform.
Jonathan Usuka, Wei Zhu, Volker Brendel
1998 J jnl
GeneGenerator - a flexible algorithm for gene prediction and its application to maize sequences.
Bioinform.
Jürgen Kleffe, Klaus Hermann, Wolfgang Vahrson, Burghardt Wittig, Volker Brendel
1997 — conf
GeneGenerator- a flexible algorfthm for gene prediction.
German Conference on Bioinformatics
Jürgen Kleffe, Klaus Hermann, Wolfgang Vahrson, Burghardt Wittig, Volker Brendel
1994 J jnl
Applications of Statistical Criteria in Protein Sequence Analysis: Case Study of Yeast RNA Polymerase II Subunits.
Comput. Chem.
Volker Brendel, Samuel Karlin