Vladimír Ulman

24 papers B 3Journal 9Unranked 12

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	DeepFuse: A multi-rater fusion and refinement network for computing silver-standard annotations. Comput. Biol. Medicine Cem Emre Akbas, Vladimír Ulman, Martin Maska, Michal Kozubek
2025	J	`jnl`	SAMJ: Fast Image Annotation on ImageJ/Fiji via Segment Anything Model. CoRR Carlos Garcia-Lopez-de-Haro, Caterina Fuster-Barceló, Curtis T. Rueden, Jónathan Heras, Vladimír Ulman, Daniel Franco-Barranco, Adrián Inés, Kevin W. Eliceiri, Jean-Christophe Olivo-Marin, Jean-Yves Tinevez, Daniel Sage, Arrate Muñoz-Barrutia
2024	—	`conf`	CHOTA: A Higher Order Accuracy Metric for Cell Tracking. ECCV Workshops (16) Timo Kaiser, Vladimír Ulman, Bodo Rosenhahn
2024	J	`jnl`	CHOTA: A Higher Order Accuracy Metric for Cell Tracking. CoRR Timo Kaiser, Vladimír Ulman, Bodo Rosenhahn
2024	J	`jnl`	Generative modeling of living cells with SO(3)-equivariant implicit neural representations. Medical Image Anal. David Wiesner, Julian Suk, Sven Dummer, Tereza Necasová, Vladimír Ulman, David Svoboda, Jelmer M. Wolterink
2023	J	`jnl`	Generative modeling of living cells with SO(3)-equivariant implicit neural representations. CoRR David Wiesner, Julian Suk, Sven Dummer, Tereza Necasová, Vladimír Ulman, David Svoboda, Jelmer M. Wolterink
2019	B	`conf`	Toward Robust Fully 3D Filopodium Segmentation and Tracking in Time-Lapse Fluorescence Microscopy. ICIP Martin Maska, Tereza Necasová, David Wiesner, Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda
2018	—	`conf`	Automatic Fusion of Segmentation and Tracking Labels. ECCV Workshops (6) Cem Emre Akbas, Vladimír Ulman, Martin Maska, Florian Jug, Michal Kozubek
2018	J	`jnl`	FiloGen: A Model-Based Generator of Synthetic 3-D Time-Lapse Sequences of Single Motile Cells With Growing and Branching Filopodia. IEEE Trans. Medical Imaging Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Tereza Necasová, Katsiarina Morgaenko, Lívia Eiselleová, Lenka Tesarová, Martin Maska
2018	—	`conf`	Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Multiple Mutually Interacting Motile Cells with Filopodia. SASHIMI@MICCAI Igor Peterlík, David Svoboda, Vladimír Ulman, Dmitry V. Sorokin, Martin Maska
2017	J	`jnl`	MitoGen: A Framework for Generating 3D Synthetic Time-Lapse Sequences of Cell Populations in Fluorescence Microscopy. IEEE Trans. Medical Imaging David Svoboda, Vladimír Ulman
2017	—	`conf`	Model-based generation of synthetic 3D time-lapse sequences of motile cells with growing filopodia. ISBI Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Martin Maska
2016	B	`conf`	Vascular network formation in silico using the extended cellular potts model. ICIP David Svoboda, Vladimír Ulman, Peter Kovác, Barbara Salingova, Lenka Tesarová, Irena K. Koutna, Petr Matula
2015	—	`conf`	On proper simulation of chromatin structure in static images as well as in time-lapse sequences in fluorescence microscopy. ISBI David Svoboda, Vladimír Ulman, Igor Peterlík
2015	—	`conf`	TRAgen: A Tool for Generation of Synthetic Time-Lapse Image Sequences of Living Cells. ICIAP (1) Vladimír Ulman, Zoltán Orémus, David Svoboda
2014	J	`jnl`	A benchmark for comparison of cell tracking algorithms. Bioinform. Martin Maska, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M. W. Balak, Pavel Karas, Tereza Bolcková, Markéta Streitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Krízek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek, Carlos Ortiz-de-Solorzano
2014	B	`conf`	On proper simulation of phenomena influencing image formation in fluorescence microscopy. ICIP David Svoboda, Vladimír Ulman, Ludek Matyska, Martin Maska, Jan Bella, Stanislav Stejskal
2013	—	`conf`	Towards a Realistic Distribution of Cells in Synthetically Generated 3D Cell Populations. ICIAP (2) David Svoboda, Vladimír Ulman
2012	—	`conf`	Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy. ICIAR (2) David Svoboda, Vladimír Ulman
2011	J	`jnl`	Boundary Treatment for Young-van Vliet Recursive Zero-Mean Gabor Filtering. EURASIP J. Adv. Signal Process. Vladimír Ulman
2010	—	`conf`	Improving Accuracy of Optical Flow of Heeger's Original Method on Biomedical Images. ICIAR (1) Vladimír Ulman
2007	—	`conf`	Estimating large local motion in live-cell imaging using variational optical flow - towards motion tracking in live cell imaging using optical flow. VISAPP (2) Jan Hubený, Vladimír Ulman, Pavel Matula
2007	—	`conf`	On generating ground-truth time-lapse image sequences and flow fields. ICINCO-RA (1) Vladimír Ulman, Jan Hubený
2007	—	`conf`	Pseudo-real Image Sequence Generator for Optical Flow Computations. SCIA Vladimír Ulman, Jan Hubený