Vladimir Filkov

99 papers A* 15A 13B 4C 2Journal 35Unranked 28

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Intelligent Documentation in Medical Education: Can AI Replace Manual Case Logging? CoRR Nafiz Imtiaz Khan, Kylie Cleland, Vladimir Filkov, Roger Eric Goldman
2026	J	`jnl`	Leveraging Language Models to Discover Evidence-Based Actions for OSS Sustainability. CoRR Nafiz Imtiaz Khan, Vladimir Filkov
2026	J	`jnl`	MammoWise: Multi-Model Local RAG Pipeline for Mammography Report Generation. CoRR Raiyan Jahangir, Nafiz Imtiaz Khan, Amritanand Sudheerkumar, Vladimir Filkov
2026	J	`jnl`	Multi-Ecosystem Modeling of OSS Project Sustainability. CoRR Arjun Ashok, Nafiz Imtiaz Khan, Swati Singhvi, Stefan Stanciulescu, Zhouhao Wang, Vladimir Filkov
2026	J	`jnl`	Natural language processing of biomedical text to map and prioritize protein-disease associations in HFpEF. Comput. Biol. Medicine Clodomir J. Santana Jr., Chitra Mukherjee, Arnib Quazi, Ronaldo Menezes, Vladimir Filkov, Dibakar Sigdel, Howard Choi, Imo Ebong, Padmini Sirish, Nicholas R. Anderson, Xuan Wang, Heng Ji, Jiawei Han, Baback Roshanravan, Leighton T. Izu, Thomas W. Smith, Nipavan Chiamvimonvat, Colleen E. Clancy, Martin Cadeiras, David Liem
2026	J	`jnl`	RadAnnotate: Large Language Models for Efficient and Reliable Radiology Report Annotation. CoRR Saisha Pradeep Shetty, Roger Eric Goldman, Vladimir Filkov
2025	J	`jnl`	Causal Debiasing Medical Multimodal Representation Learning with Missing Modalities. CoRR Xiaoguang Zhu, Lianlong Sun, Yang Liu, Pengyi Jiang, Uma Srivatsa, Nipavan Chiamvimonvat, Vladimir Filkov
2025	J	`jnl`	Deep Learning Models for Automatic Classification of Anatomic Location in Abdominopelvic Digital Subtraction Angiography. J. Imaging Inform. Medicine Reza Moein Taghavi, Amol Shah, Vladimir Filkov, Roger Eric Goldman
2025	—	`conf`	EvidenceBot: A Privacy-Preserving, Customizable RAG-Based Tool for Enhancing Large Language Model Interactions. SIGSOFT FSE Companion Nafiz Imtiaz Khan, Vladimir Filkov
2025	A*	`conf`	OSSPREY: AI-Driven Forecasting and Intervention for OSS Project Sustainability. ASE Nafiz Imtiaz Khan, Priyal Soni, Arjun Ashok, Vladimir Filkov
2024	A*	`conf`	Do We Run How We Say We Run? Formalization and Practice of Governance in OSS Communities. CHI Mahasweta Chakraborti, Curtis Atkisson, Stefan Stanciulescu, Vladimir Filkov, Seth Frey
2024	—	`conf`	From Models to Practice: Enhancing OSS Project Sustainability with Evidence-Based Advice. SIGSOFT FSE Companion Nafiz Imtiaz Khan, Vladimir Filkov
2024	—	`ed.`	Proceedings of the 39th IEEE/ACM International Conference on Automated Software Engineering Workshops, ASEW 2024, Sacramento, CA, USA, 27 October 2024 - 1 November 2024 ASE Workshops Vladimir Filkov, Baishakhi Ray, Minghui Zhou
2024	A*	`ed.`	Proceedings of the 39th IEEE/ACM International Conference on Automated Software Engineering, ASE 2024, Sacramento, CA, USA, October 27 - November 1, 2024 ASE Vladimir Filkov, Baishakhi Ray, Minghui Zhou
2023	J	`jnl`	Do We Run How We Say We Run? Formalization and Practice of Governance in OSS Communities. CoRR Mahasweta Chakraborti, Curtis Atkisson, Stefan Stanciulescu, Vladimir Filkov, Seth Frey
2023	A	`conf`	GitHub OSS Governance File Dataset. MSR Yibo Yan, Seth Frey, Amy X. Zhang, Vladimir Filkov, Likang Yin
2023	J	`jnl`	GitHub OSS Governance File Dataset. CoRR Yibo Yan, Seth Frey, Amy X. Zhang, Vladimir Filkov, Likang Yin
2023	A*	`conf`	On the Self-Governance and Episodic Changes in Apache Incubator Projects: An Empirical Study. ICSE Likang Yin, Xiyu Zhang, Vladimir Filkov
2022	—	`conf`	Code, quality, and process metrics in graduated and retired ASFI projects. ESEC/SIGSOFT FSE Stefan Stanciulescu, Likang Yin, Vladimir Filkov
2022	A	`conf`	Exploring Apache Incubator Project Trajectories with APEX. MSR Anirudh Ramchandran, Likang Yin, Vladimir Filkov
2022	J	`jnl`	Exploring Apache Incubator Project Trajectories with APEX. CoRR Anirudh Ramchandran, Likang Yin, Vladimir Filkov
2022	J	`jnl`	Open Source Software Sustainability: Combining Institutional Analysis and Socio-Technical Networks. CoRR Likang Yin, Mahasweta Chakraborti, Charles M. Schweik, Seth Frey, Vladimir Filkov
2022	J	`jnl`	Open Source Software Sustainability: Combining Institutional Analysis and Socio-Technical Networks. Proc. ACM Hum. Comput. Interact. Likang Yin, Mahasweta Chakraborti, Yibo Yan, Charles M. Schweik, Seth Frey, Vladimir Filkov
2021	A	`conf`	Apache Software Foundation Incubator Project Sustainability Dataset. MSR Likang Yin, Zhiyuan Zhang, Qi Xuan, Vladimir Filkov
2021	C	`conf`	Beyond NVD: Cybersecurity meets the Semantic Web. NSPW Raúl Aranovich, Muting Wu, Dian Yu, Katya Katsy, Benyamin Ahmadnia, Matthew Bishop, Vladimir Filkov, Kenji Sagae
2021	J	`jnl`	Sustainability Forecasting for Apache Incubator Projects. CoRR Likang Yin, Zhuangzhi Chen, Qi Xuan, Vladimir Filkov
2021	—	`conf`	Sustainability forecasting for Apache incubator projects. ESEC/SIGSOFT FSE Likang Yin, Zhuangzhi Chen, Qi Xuan, Vladimir Filkov
2020	A*	`conf`	Software visualization and deep transfer learning for effective software defect prediction. ICSE Jinyin Chen, Keke Hu, Yue Yu, Zhuangzhi Chen, Qi Xuan, Yi Liu, Vladimir Filkov
2020	A*	`conf`	Team Discussions and Dynamics During DevOps Tool Adoptions in OSS Projects. ASE Likang Yin, Vladimir Filkov
2019	J	`jnl`	A clustering-based approach for mining dockerfile evolutionary trajectories. Sci. China Inf. Sci. Yang Zhang, Huaimin Wang, Vladimir Filkov
2019	J	`jnl`	Cross-project code clones in GitHub. Empir. Softw. Eng. Mohammad Gharehyazie, Baishakhi Ray, Mehdi Keshani, Masoumeh Soleimani Zavosht, Abbas Heydarnoori, Vladimir Filkov
2019	J	`jnl`	Rebuttal to Berger et al., TOPLAS 2019. CoRR Baishakhi Ray, Prem Devanbu, Vladimir Filkov
2019	A*	`conf`	Socio-technical work-rate increase associates with changes in work patterns in online projects. ICSE Farhana Sarker, Bogdan Vasilescu, Kelly Blincoe, Vladimir Filkov
2019	A	`conf`	Studying Android App Popularity by Cross-Linking GitHub and Google Play Store. SANER John Businge, Moses Openja, David Kavaler, Engineer Bainomugisha, Foutse Khomh, Vladimir Filkov
2019	A*	`conf`	Tool choice matters: JavaScript quality assurance tools and usage outcomes in GitHub projects. ICSE David Kavaler, Asher Trockman, Bogdan Vasilescu, Vladimir Filkov
2019	J	`jnl`	Whom are you going to call? determinants of @-mentions in Github discussions. Empir. Softw. Eng. David Kavaler, Premkumar T. Devanbu, Vladimir Filkov
2018	J	`jnl`	Modern Food Foraging Patterns: Geography and Cuisine Choices of Restaurant Patrons on Yelp. IEEE Trans. Comput. Soc. Syst. Qi Xuan, Mingming Zhou, Zhiyuan Zhang, Chenbo Fu, Yun Xiang, Zhefu Wu, Vladimir Filkov
2018	—	`conf`	One size does not fit all: an empirical study of containerized continuous deployment workflows. ESEC/SIGSOFT FSE Yang Zhang, Bogdan Vasilescu, Huaimin Wang, Vladimir Filkov
2018	—	`conf`	Reconstructing Gene Networks of Forest Trees from Gene Expression Data: Toward Higher-Resolution Approaches. ICT Innovations Matt Zinkgraf, Andrew Groover, Vladimir Filkov
2018	J	`jnl`	Social Synchrony on Complex Networks. IEEE Trans. Cybern. Qi Xuan, Zhiyuan Zhang, Chenbo Fu, Hong-xiang Hu, Vladimir Filkov
2018	J	`jnl`	Whom Are You Going to Call?: Determinants of @-Mentions in GitHub Discussions. CoRR David Kavaler, Premkumar T. Devanbu, Vladimir Filkov
2018	—	`conf`	Within-ecosystem issue linking: a large-scale study of rails. SoftwareMining@ASE Yang Zhang, Yue Yu, Huaimin Wang, Bogdan Vasilescu, Vladimir Filkov
2017	J	`jnl`	A large-scale study of programming languages and code quality in GitHub. Commun. ACM Baishakhi Ray, Daryl Posnett, Premkumar T. Devanbu, Vladimir Filkov
2017	A*	`conf`	Perceived language complexity in GitHub issue discussions and their effect on issue resolution. ASE David Kavaler, Sasha Sirovica, Vincent J. Hellendoorn, Raúl Aranovich, Vladimir Filkov
2017	A	`conf`	Some from here, some from there: cross-project code reuse in GitHub. MSR Mohammad Gharehyazie, Baishakhi Ray, Vladimir Filkov
2017	J	`jnl`	Stochastic actor-oriented modeling for studying homophily and social influence in OSS projects. Empir. Softw. Eng. David Kavaler, Vladimir Filkov
2017	A*	`conf`	The impact of continuous integration on other software development practices: a large-scale empirical study. ASE Yangyang Zhao, Alexander Serebrenik, Yuming Zhou, Vladimir Filkov, Bogdan Vasilescu
2017	J	`jnl`	Tracing distributed collaborative development in apache software foundation projects. Empir. Softw. Eng. Mohammad Gharehyazie, Vladimir Filkov
2016	J	`jnl`	Initial and Eventual Software Quality Relating to Continuous Integration in GitHub. CoRR Yue Yu, Bogdan Vasilescu, Huaimin Wang, Vladimir Filkov, Premkumar T. Devanbu
2016	A*	`conf`	The sky is not the limit: multitasking across GitHub projects. ICSE Bogdan Vasilescu, Kelly Blincoe, Qi Xuan, Casey Casalnuovo, Daniela E. Damian, Premkumar T. Devanbu, Vladimir Filkov
2015	A	`conf`	A Data Set for Social Diversity Studies of GitHub Teams. MSR Bogdan Vasilescu, Alexander Serebrenik, Vladimir Filkov
2015	—	`conf`	Assert Use in GitHub Projects. ICSE (1) Casey Casalnuovo, Premkumar T. Devanbu, Abílio Oliveira, Vladimir Filkov, Baishakhi Ray
2015	J	`jnl`	Developer initiation and social interactions in OSS: A case study of the Apache Software Foundation. Empir. Softw. Eng. Mohammad Gharehyazie, Daryl Posnett, Bogdan Vasilescu, Vladimir Filkov
2015	—	`conf`	Developer onboarding in GitHub: the role of prior social links and language experience. ESEC/SIGSOFT FSE Casey Casalnuovo, Bogdan Vasilescu, Premkumar T. Devanbu, Vladimir Filkov
2015	A*	`conf`	Gender and Tenure Diversity in GitHub Teams. CHI Bogdan Vasilescu, Daryl Posnett, Baishakhi Ray, Mark G. J. van den Brand, Alexander Serebrenik, Premkumar T. Devanbu, Vladimir Filkov
2015	—	`conf`	Perceptions of Diversity on Git Hub: A User Survey. CHASE@ICSE Bogdan Vasilescu, Vladimir Filkov, Alexander Serebrenik
2015	—	`conf`	Quality and productivity outcomes relating to continuous integration in GitHub. ESEC/SIGSOFT FSE Bogdan Vasilescu, Yue Yu, Huaimin Wang, Premkumar T. Devanbu, Vladimir Filkov
2015	A	`conf`	Wait for It: Determinants of Pull Request Evaluation Latency on GitHub. MSR Yue Yu, Huaimin Wang, Vladimir Filkov, Premkumar T. Devanbu, Bogdan Vasilescu
2014	—	`conf`	A large scale study of programming languages and code quality in github. SIGSOFT FSE Baishakhi Ray, Daryl Posnett, Vladimir Filkov, Premkumar T. Devanbu
2014	A*	`conf`	Building it together: synchronous development in OSS. ICSE Qi Xuan, Vladimir Filkov
2014	J	`jnl`	Converging Work-Talk Patterns in Online Task-Oriented Communities. CoRR Qi Xuan, Premkumar T. Devanbu, Vladimir Filkov
2014	—	`conf`	Focus-shifting patterns of OSS developers and their congruence with call graphs. SIGSOFT FSE Qi Xuan, Aaron Okano, Premkumar T. Devanbu, Vladimir Filkov
2014	A	`conf`	How social Q&A sites are changing knowledge sharing in open source software communities. CSCW Bogdan Vasilescu, Alexander Serebrenik, Premkumar T. Devanbu, Vladimir Filkov
2013	A	`conf`	Asking for (and about) permissions used by Android apps. MSR Ryan Stevens, Jonathan Ganz, Vladimir Filkov, Premkumar T. Devanbu, Hao Chen
2013	A*	`conf`	Dual ecological measures of focus in software development. ICSE Daryl Posnett, Raissa M. D'Souza, Premkumar T. Devanbu, Vladimir Filkov
2013	—	`conf`	Social Activities Rival Patch Submission for Prediction of Developer Initiation in OSS Projects. ICSM Mohammad Gharehyazie, Daryl Posnett, Vladimir Filkov
2013	—	`conf`	StackOverflow and GitHub: Associations between Software Development and Crowdsourced Knowledge. SocialCom Bogdan Vasilescu, Vladimir Filkov, Alexander Serebrenik
2013	—	`ch.`	Synchrony in Social Groups and Its Benefits. Handbook of Human Computation Qi Xuan, Vladimir Filkov
2013	—	`conf`	Using and Asking: APIs Used in the Android Market and Asked about in StackOverflow. SocInfo David Kavaler, Daryl Posnett, Clint Gibler, Hao Chen, Premkumar T. Devanbu, Vladimir Filkov
2012	—	`conf`	Invited: Identifying mutations from TILLING experiments. ICCABS Vladimir Filkov
2012	A	`conf`	MIC check: A correlation tactic for ESE data. MSR Daryl Posnett, Premkumar T. Devanbu, Vladimir Filkov
2012	—	`conf`	Measuring the Effect of Social Communications on Individual Working Rhythms: A Case Study of Open Source Software. SocialInformatics Qi Xuan, Mohammad Gharehyazie, Premkumar T. Devanbu, Vladimir Filkov
2012	—	`conf`	Mining Stack Exchange: Expertise Is Evident from Initial Contributions. SocialInformatics Daryl Posnett, Eric Warburg, Premkumar T. Devanbu, Vladimir Filkov
2012	—	`conf`	POPE: Pipeline of Parentally-Biased Expression. ISBRA Victor Missirian, Isabelle Henry, Luca Comai, Vladimir Filkov
2011	A*	`conf`	Ecological inference in empirical software engineering. ASE Daryl Posnett, Vladimir Filkov, Premkumar T. Devanbu
2011	J	`jnl`	Statistical Mutation Calling from Sequenced Overlapping DNA Pools in TILLING Experiments. BMC Bioinform. Victor Missirian, Luca Comai, Vladimir Filkov
2010	A	`conf`	Validity of network analyses in Open Source Projects. MSR Roozbeh Nia, Christian Bird, Premkumar T. Devanbu, Vladimir Filkov
2009	—	`conf`	Fair and balanced?: bias in bug-fix datasets. ESEC/SIGSOFT FSE Christian Bird, Adrian Bachmann, Eirik Aune, John Duffy, Abraham Bernstein, Vladimir Filkov, Premkumar T. Devanbu
2009	—	`conf`	From Architecture to Function (and Back) in Bio-networks. BICoB Vladimir Filkov
2009	A	`conf`	Structure and Dynamics of Research Collaboration in Computer Science. SDM Christian Bird, Earl T. Barr, Andre Nash, Premkumar T. Devanbu, Vladimir Filkov, Zhendong Su
2008	J	`jnl`	A Simple Model of the Modular Structure of Transcriptional Regulation in Yeast. J. Comput. Biol. Vladimir Filkov, Nameeta Y. Shah
2008	A	`conf`	Consensus Clustering Algorithms: Comparison and Refinement. ALENEX Andrey Goder, Vladimir Filkov
2008	J	`jnl`	Graphlet Arrival: Modeling and verifying a broad array of network properties CoRR Zachary M. Saul, Soumen Roy, Raissa M. D'Souza, Premkumar T. Devanbu, Vladimir Filkov
2008	—	`conf`	Latent social structure in open source projects. SIGSOFT FSE Christian Bird, David S. Pattison, Raissa M. D'Souza, Vladimir Filkov, Premkumar T. Devanbu
2007	J	`jnl`	Exploring biological network structure using exponential random graph models. Bioinform. Zachary M. Saul, Vladimir Filkov
2007	—	`conf`	Recommending random walks. ESEC/SIGSOFT FSE Zachary M. Saul, Vladimir Filkov, Premkumar T. Devanbu, Christian Bird
2006	J	`jnl`	A Linear-Time Algorithm for the Perfect Phylogeny Haplotyping (PPH) Problem. J. Comput. Biol. Zhihong Ding, Vladimir Filkov, Dan Gusfield
2006	C	`conf`	Methods for Random Modularization of Biological Networks. BIBE Zachary M. Saul, Vladimir Filkov
2005	B	`conf`	A Linear-Time Algorithm for the Perfect Phylogeny Haplotyping (PPH) Problem. RECOMB Zhihong Ding, Vladimir Filkov, Dan Gusfield
2004	—	`conf`	Heterogeneous Data Integration with the Consensus Clustering Formalism. DILS Vladimir Filkov, Steven Skiena
2004	—	`conf`	Inferring Cis-region Hierarchies from Patterns in Time-Course Gene Expression Data Regulatory Genomics Vladimir Filkov, Nameeta Y. Shah
2004	J	`jnl`	Integrating Microarray Data By Consensus Clustering. Int. J. Artif. Intell. Tools Vladimir Filkov, Steven Skiena
2003	—	`conf`	GeneBox: Interactive Visualization of Microarray Data Sets. METMBS Nameeta Y. Shah, Vladimir Filkov, Bernd Hamann, Kenneth I. Joy
2003	B	`conf`	Integrating Microarray Data by Consensus Clustering. ICTAI Vladimir Filkov, Steven Skiena
2002	J	`jnl`	Analysis Techniques for Microarray Time-Series Data. J. Comput. Biol. Vladimir Filkov, Steven Skiena, Jizu Zhi
2001	B	`conf`	Analysis techniques for microarray time-series data. RECOMB Vladimir Filkov, Steven Skiena, Jizu Zhi
2001	J	`jnl`	Identifying gene regulatory networks from experimental data. Parallel Comput. Ting Chen, Vladimir Filkov, Steven Skiena
2000	—	`conf`	Covering Points on a Circle with Circular Arcs. CCCG Vladimir Filkov
1999	B	`conf`	Identifying gene regulatory networks from experimental data. RECOMB Ting Chen, Vladimir Filkov, Steven Skiena