Vincent Daubin

12 papers Misc 1Journal 11
YearRankTypeTitle / Venue / Authors
2022 J jnl
Phylogenetic reconciliation.
PLoS Comput. Biol.
Hugo Menet, Vincent Daubin, Eric Tannier
2022 J jnl
Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation.
Bioinform.
Simon Penel, Hugo Menet, Théo Tricou, Vincent Daubin, Eric Tannier
2020 J jnl
Treerecs: an integrated phylogenetic tool, from sequences to reconciliations.
Bioinform.
Nicolas Comte, Benoit Morel, Damir Hasic, Laurent Guéguen, Bastien Boussau, Vincent Daubin, Simon Penel, Céline Scornavacca, Manolo Gouy, Alexandros Stamatakis, Eric Tannier, David P. Parsons
2018 J jnl
RecPhyloXML: a format for reconciled gene trees.
Bioinform.
Wandrille Duchemin, Guillaume Gence, Anne-Muriel Arigon Chifolleau, Lars Arvestad, Mukul S. Bansal, Vincent Berry, Bastien Boussau, François Chevenet, Nicolas Comte, Adrián A. Davín, Christophe Dessimoz, David Dylus, Damir Hasic, Diego Mallo, Rémi Planel, David Posada, Céline Scornavacca, Gergely J. Szöllosi, Louxin Zhang, Eric Tannier, Vincent Daubin
2013 J jnl
Lateral gene transfer, rearrangement, reconciliation.
BMC Bioinform.
Murray Patterson, Gergely J. Szöllosi, Vincent Daubin, Eric Tannier
2013 J jnl
TPMS: a set of utilities for querying collections of gene trees.
BMC Bioinform.
Thomas Bigot, Vincent Daubin, Florent Lassalle, Guy Perrière
2012 J jnl
Evolution of gene neighborhoods within reconciled phylogenies.
Bioinform.
Sèverine Bérard, Coralie Gallien, Bastien Boussau, Gergely J. Szöllosi, Vincent Daubin, Eric Tannier
2012 J jnl
High-quality sequence clustering guided by network topology and multiple alignment likelihood.
Bioinform.
Vincent Miele, Simon Penel, Vincent Daubin, Franck Picard, Daniel Kahn, Laurent Duret
2011 J jnl
Models, algorithms and programs for phylogeny reconciliation.
Briefings Bioinform.
Jean-Philippe Doyon, Vincent Ranwez, Vincent Daubin, Vincent Berry
2010 J jnl
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests.
BMC Bioinform.
Sophie S. Abby, Eric Tannier, Manolo Gouy, Vincent Daubin
2009 J jnl
Databases of homologous gene families for comparative genomics.
BMC Bioinform.
Simon Penel, Anne-Muriel Arigon, Jean-François Dufayard, Anne-Sophie Sertier, Vincent Daubin, Laurent Duret, Manolo Gouy, Guy Perrière
2004 Misc conf
Super-tree Approach for Studying the Phylogeny of Prokaryotes: New Results on Completely Sequenced Genomes.
International Conference on Computational Science
Alexandra Calteau, Vincent Daubin, Guy Perrière