Vikas Bansal

21 papers A 1B 3C 1Misc 1Journal 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
Analysis of targeted and whole genome sequencing of PacBio HiFi reads for a comprehensive genotyping of gene-proximal and phenotype-associated Variable Number Tandem Repeats.
PLoS Comput. Biol.
Sara Javadzadeh, Aaron Adamson, Jonghun Park, Se-Young Jo, Yuan-Chun Ding, Mehrdad Bakhtiari, Vikas Bansal, Susan L. Neuhausen, Vineet Bafna
2023 J jnl
A multilocus approach for accurate variant calling in low-copy repeats using whole-genome sequencing.
Bioinform.
Timofey Prodanov, Vikas Bansal
2019 J jnl
Integrating read-based and population-based phasing for dense and accurate haplotyping of individual genomes.
Bioinform.
Vikas Bansal
2018 J jnl
An accurate algorithm for the detection of DNA fragments from dilution pool sequencing experiments.
Bioinform.
Vikas Bansal
2018 B conf
Targeted Genotyping of Variable Number Tandem Repeats with AdVNTR.
RECOMB
Mehrdad Bakhtiari, Sharona Shleizer-Burko, Melissa Gymrek, Vikas Bansal, Vineet Bafna
2017 J jnl
A computational method for estimating the PCR duplication rate in DNA and RNA-seq experiments.
BMC Bioinform.
Vikas Bansal
2016 J jnl
A statistical method for the detection of variants from next-generation resequencing of DNA poolsA probabilistic method for the detection and genotyping of small indels from population-scale sequence data.
Bioinform.
Vikas Bansal, Ondrej Libiger
2015 J jnl
Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.
BMC Bioinform.
Vikas Bansal, Ondrej Libiger
2011 J jnl
A probabilistic method for the detection and genotyping of small indels from population-scale sequence data.
Bioinform.
Vikas Bansal, Ondrej Libiger
2011 Misc conf
An Application and Empirical Comparison of Statistical Analysis Methods for Associating Rare Variants to a Complex Phenotype.
Pacific Symposium on Biocomputing
Vikas Bansal, Ondrej Libiger, Ali Torkamani, Nicholas J. Schork
2011 J jnl
Strobe sequence design for haplotype assembly.
BMC Bioinform.
Christine Lo, Ali Bashir, Vikas Bansal, Vineet Bafna
2010 J jnl
A Covering Method for Detecting Genetic Associations between Rare Variants and Common Phenotypes.
PLoS Comput. Biol.
Gaurav Bhatia, Vikas Bansal, Olivier Harismendy, Nicholas J. Schork, Eric J. Topol, Kelly A. Frazer, Vineet Bafna
2010 J jnl
A statistical method for the detection of variants from next-generation resequencing of DNA pools.
Bioinform.
Vikas Bansal
2008 — —
Computational methods for analyzing human genetic variation.
Vikas Bansal
2008 C conf
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
ECCB
Vikas Bansal, Vineet Bafna
2007 J jnl
A Decomposition Theory for Phylogenetic Networks and Incompatible Characters.
J. Comput. Biol.
Dan Gusfield, Vikas Bansal, Vineet Bafna, Yun S. Song
2006 J jnl
Inference about Recombination from Haplotype Data: Lower Bounds and Recombination Hotspots.
J. Comput. Biol.
Vineet Bafna, Vikas Bansal
2005 B conf
A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters.
RECOMB
Dan Gusfield, Vikas Bansal
2005 B conf
Improved Recombination Lower Bounds for Haplotype Data.
RECOMB
Vineet Bafna, Vikas Bansal
2004 A conf
Labeling Smart Dust.
ESA
Vikas Bansal, Friedhelm Meyer auf der Heide, Christian Sohler
2004 J jnl
The Number of Recombination Events in a Sample History: Conflict Graph and Lower Bounds.
IEEE ACM Trans. Comput. Biol. Bioinform.
Vineet Bafna, Vikas Bansal