Vida Ravanmehr

25 papers B 3C 1Misc 2Journal 16Unranked 2
YearRankTypeTitle / Venue / Authors
2023 J jnl
GRAPE for fast and scalable graph processing and random-walk-based embedding.
Nat. Comput. Sci.
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Carlos Cano, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini
2023 J jnl
KG-Hub - Building and Exchanging Biological Knowledge Graphs.
CoRR
J. Harry Caufield, Tim E. Putman, Kevin Schaper, Deepak R. Unni, Harshad Hegde, Tiffany J. Callahan, Luca Cappelletti, Sierra A. T. Moxon, Vida Ravanmehr, Seth Carbon, Lauren E. Chan, Katherina G. Cortes, Kent A. Shefchek, Glass Elsarboukh, James P. Balhoff, Tommaso Fontana, Nicolas Matentzoglu, Richard M. Bruskiewich, Anne E. Thessen, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall, Justin T. Reese
2023 J jnl
KG-Hub - building and exchanging biological knowledge graphs.
Bioinform.
J. Harry Caufield, Tim E. Putman, Kevin Schaper, Deepak R. Unni, Harshad Hegde, Tiffany J. Callahan, Luca Cappelletti, Sierra A. T. Moxon, Vida Ravanmehr, Seth Carbon, Lauren E. Chan, Katherina G. Cortes, Kent A. Shefchek, Glass Elsarboukh, James P. Balhoff, Tommaso Fontana, Nicolas Matentzoglu, Richard M. Bruskiewich, Anne E. Thessen, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall, Justin T. Reese
2021 J jnl
GraPE: fast and scalable Graph Processing and Embedding.
CoRR
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini
2021 J jnl
Het-node2vec: second order random walk sampling for heterogeneous multigraphs embedding.
CoRR
Giorgio Valentini, Elena Casiraghi, Luca Cappelletti, Vida Ravanmehr, Tommaso Fontana, Justin T. Reese, Peter N. Robinson
2021 J jnl
KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response.
Patterns
Justin T. Reese, Deepak R. Unni, Tiffany J. Callahan, Luca Cappelletti, Vida Ravanmehr, Seth Carbon, Kent A. Shefchek, Benjamin M. Good, James P. Balhoff, Tommaso Fontana, Hannah Blau, Nicolas Matentzoglu, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall
2020 J jnl
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species.
Nucleic Acids Res.
Kent A. Shefchek, Nomi L. Harris, Michael A. Gargano, Nicolas Matentzoglu, Deepak R. Unni, Matthew H. Brush, Dan Keith, Tom Conlin, Nicole A. Vasilevsky, Xingmin Aaron Zhang, James P. Balhoff, Larry Babb, Susan M. Bello, Hannah Blau, Yvonne M. Bradford, Seth Carbon, Leigh Carmody, Lauren E. Chan, Valentina Cipriani, Alayne Cuzick, Maria G. Della Rocca, Nathan A. Dunn, Shahim Essaid, Petra Fey, Christian A. Grove, Jean-Philippe F. Gourdine, Ada Hamosh, Midori A. Harris, Ingo Helbig, Maureen E. Hoatlin, Marcin P. Joachimiak, Simon Jupp, Kenneth B. Lett, Suzanna E. Lewis, Craig McNamara, Zoë May Pendlington, Clare Pilgrim, Tim E. Putman, Vida Ravanmehr, Justin T. Reese, Erin Rooney Riggs, Sofia M. C. Robb, Paola Roncaglia, James Seager, Erik Segerdell, Morgan Similuk, Andrea L. Storm, Courtney Thaxon, Anne E. Thessen, Julius O. B. Jacobsen, Julie A. McMurry, Tudor Groza, Sebastian Köhler, Damian Smedley, Peter N. Robinson, Christopher J. Mungall, Melissa A. Haendel, Monica C. Munoz-Torres, David Osumi-Sutherland
2019 J jnl
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery.
npj Digit. Medicine
Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson
2018 J jnl
ChIPWig: a random access-enabling lossless and lossy compression method for ChIP-seq data.
Bioinform.
Vida Ravanmehr, Minji Kim, Zhiying Wang, Olgica Milenkovic
2018 J jnl
Paired threshold graphs.
Discret. Appl. Math.
Vida Ravanmehr, Gregory J. Puleo, Sadegh Bolouki, Olgica Milenkovic
2016 J jnl
Check-hybrid GLDPC Codes: Systematic Elimination of Trapping Sets and Guaranteed Error Correction Capability.
CoRR
Vida Ravanmehr, Mehrdad Khatami, David Declercq, Bane Vasic
2016 J jnl
Check-hybrid GLDPC codes: Systematic elimination of trapping sets and guaranteed error correction capability.
Trans. Emerg. Telecommun. Technol.
Vida Ravanmehr, Mehrdad Khatami, David Declercq, Bane Vasic
2016 J jnl
Doubly Threshold Graphs for Social Network Modeling.
CoRR
Vida Ravanmehr, Sadegh Bolouki, Gregory J. Puleo, Olgica Milenkovic
2016 B conf
Doubly threshold graphs for social network modeling.
ITW
Vida Ravanmehr, Sadegh Bolouki, Gregory J. Puleo, Olgica Milenkovic
2015 — —
Codes on Graphs and Analysis of Iterative Algorithms for Reconstructing Sparse Signals and Decoding of Check-Hybrid GLDPC Codes.
Vida Ravanmehr
2015 Misc conf
Fault-resilient decoders and memories made of unreliable components.
ITA
Bane Vasic, Predrag Ivanis, Srdan Brkic, Vida Ravanmehr
2014 Misc conf
Check-hybrid GLDPC codes without small trapping sets.
ITA
Vida Ravanmehr, David Declercq, Bane Vasic
2014 B conf
Check-hybrid GLDPC codes: Systematic elimination of trapping sets by super checks.
ISIT
Vida Ravanmehr, David Declercq, Bane Vasic
2014 B conf
GBP-based detection and symmetric information rate for rectangular-grain TDMR model.
ISIT
Mehrdad Khatami, Vida Ravanmehr, Bane Vasic
2012 J jnl
An Information Theoretic Approach to Constructing Robust Boolean Gene Regulatory Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Bane Vasic, Vida Ravanmehr, Anantha Raman Krishnan
2012 J jnl
Interval-Passing Algorithm for Non-Negative Measurement Matrices: Performance and Reconstruction Analysis.
IEEE J. Emerg. Sel. Topics Circuits Syst.
Vida Ravanmehr, Ludovic Danjean, Bane Vasic, David Declercq
2012 C conf
Quasi-cyclic codes exhibiting the gene regulatory network of the cell cycle.
CIBCB
Vida Ravanmehr, Bane Vasic
2012 — conf
Signal recovery performance of the interval-passing algorithm.
ISTC
Vida Ravanmehr, Ludovic Danjean, Bane Vasic, David Declercq
2011 — conf
On iterative compressed sensing reconstruction of sparse non-negative vectors.
ISABEL
Vida Ravanmehr, Ludovic Danjean, David Declercq, Bane Vasic
2009 J jnl
Two Classes of Optimal Stopping Redundancy Codes.
Ars Comb.
Morteza Esmaeili, Vida Ravanmehr