Vid Podpecan

32 papers B 4C 3Journal 13Unranked 8
YearRankTypeTitle / Venue / Authors
2025 J jnl
Br. J. Educ. Technol.
Violeta Rosanda, Ivan Bratko, Mateja Gacnik, Vid Podpecan, Andreja Istenic
2024 J jnl
CoRR
Martin Marzidovsek, Janja Francé, Vid Podpecan, Stanka Vadnjal, Jozica Dolenc, Patricija Mozetic
2023 J jnl
Multimodal Technol. Interact.
Vid Podpecan
2022 J jnl
CoRR
Martin Marzidovsek, Vid Podpecan, Erminia Conti, Marko Debeljak, Christian Mulder
2021 conf
EACL (Hackashop)
Senja Pollak, Marko Robnik-Sikonja, Matthew Purver, Michele Boggia, Ravi Shekhar, Marko Pranjic, Salla Salmela, Ivar Krustok, Tarmo Paju, Carl-Gustav Linden, Leo Leppänen, Elaine Zosa, Matej Ulcar, Linda Freienthal, Silver Traat, Luis Adrián Cabrera-Diego, Matej Martinc, Nada Lavrac, Blaz Skrlj, Martin Znidarsic, Andraz Pelicon, Boshko Koloski, Vid Podpecan, Janez Kranjc, Shane Sheehan, Emanuela Boros, José G. Moreno, Antoine Doucet, Hannu Toivonen
2021 C conf
ICCC
Senja Pollak, Vid Podpecan, Janez Kranjc, Borut Lesjak, Nada Lavrac
2019 J jnl
ACM Comput. Surv.
Ping Xiao, Hannu Toivonen, Oskar Gross, Amílcar Cardoso, João Correia, Penousal Machado, Pedro Martins, Hugo Gonçalo Oliveira, Rahul Sharma, Alexandre Miguel Pinto, Alberto Díaz, Virginia Francisco, Pablo Gervás, Raquel Hervás, Carlos León, Jamie Forth, Matthew Purver, Geraint A. Wiggins, Dragana Miljkovic, Vid Podpecan, Senja Pollak, Jan Kralj, Martin Znidarsic, Marko Bohanec, Nada Lavrac, Tanja Urbancic, Frank van der Velde, Stuart Adam Battersby
2019 J jnl
Bioinform.
Vid Podpecan, Ziva Ramsak, Kristina Gruden, Hannu Toivonen, Nada Lavrac
2018 C conf
ICCC
Geraint A. Wiggins, Nada Lavrac, Vid Podpecan, Senja Pollak
2018 J jnl
Inf.
En Fan, Weixin Xie, Jihong Pei, Keli Hu, Xiaobin Li, Vid Podpecan
2017 J jnl
Future Gener. Comput. Syst.
Janez Kranjc, Roman Orac, Vid Podpecan, Nada Lavrac, Marko Robnik-Sikonja
2016 ch.
Machine Learning for Health Informatics
Dragana Miljkovic, Darko Aleksovski, Vid Podpecan, Nada Lavrac, Bernd Malle, Andreas Holzinger
2015 J jnl
Inf. Process. Manag.
Janez Kranjc, Jasmina Smailovic, Vid Podpecan, Miha Grcar, Martin Znidarsic, Nada Lavrac
2015 conf
SSCI
Senja Pollak, Borut Lesjak, Janez Kranjc, Vid Podpecan, Martin nidaric, Nada Lavrac
2014 conf
ISoLA (2)
Vid Podpecan
2014 J jnl
J. Intell. Inf. Syst.
Anze Vavpetic, Vid Podpecan, Nada Lavrac
2013 J jnl
Comput. J.
Laura Langohr, Vid Podpecan, Marko Petek, Igor Mozetic, Kristina Gruden, Nada Lavrac, Hannu Toivonen
2013 conf
IWBBIO
Dragana Miljkovic, Vid Podpecan, Tjasa Stare, Igor Mozetic, Kristina Gruden, Nada Lavrac
2013 conf
BIBM
Vid Podpecan, Dragana Miljkovic, Marko Petek, Tjasa Stare, Kristina Gruden, Igor Mozetic, Nada Lavrac
2013 conf
IEEE BigData
Janez Kranjc, Vid Podpecan, Nada Lavrac
2012 conf
ECML/PKDD (2)
Janez Kranjc, Vid Podpecan, Nada Lavrac
2012 ch.
Bisociative Knowledge Discovery
Laura Langohr, Vid Podpecan, Marko Petek, Igor Mozetic, Kristina Gruden
2012 B conf
PRICAI
Anze Vavpetic, Vid Podpecan, Stijn Meganck, Nada Lavrac
2012 ch.
Bisociative Knowledge Discovery
Dragana Miljkovic, Vid Podpecan, Miha Grcar, Kristina Gruden, Tjasa Stare, Marko Petek, Igor Mozetic, Nada Lavrac
2012 B conf
PRICAI
Miha Grcar, Vid Podpecan, Borut Sluban, Igor Mozetic
2012 J jnl
Comput. J.
Vid Podpecan, Monika Zemenova, Nada Lavrac
2012 ch.
Bisociative Knowledge Discovery
Igor Mozetic, Nada Lavrac, Vid Podpecan, Petra Kralj Novak, Helena Motaln, Marko Petek, Kristina Gruden, Hannu Toivonen, Kimmo Kulovesi
2011 J jnl
BMC Bioinform.
Vid Podpecan, Nada Lavrac, Igor Mozetic, Petra Kralj Novak, Igor Trajkovski, Laura Langohr, Kimmo Kulovesi, Hannu Toivonen, Marko Petek, Helena Motaln, Kristina Gruden
2010 C conf
ICCC
Igor Mozetic, Nada Lavrac, Vid Podpecan, Petra Kralj Novak, Helena Motaln, Marko Petek, Kristina Gruden, Hannu Toivonen, Kimmo Kulovesi
2010 B conf
Discovery Science
Miha Grcar, Vid Podpecan, Matjaz Jursic, Nada Lavrac
2010 B conf
PRICAI
Vid Podpecan, Miha Grcar, Nada Lavrac
2010 conf
ISoLA (1)
Vid Podpecan, Monika Záková, Nada Lavrac
src/main.rs
← Index src/main.rs rust
mod highlight;

use std::collections::BTreeMap;
use std::fs;
use std::io::Read;
use std::path::{Path, PathBuf};
use std::time::Instant;

use walkdir::WalkDir;

use highlight::highlight_code;

/// Above this threshold the file is read in full and classified
/// (text or binary) based on its complete content.
const FULL_READ_LIMIT: u64 = 4_000_000; // 4 MB
/// For files larger than the threshold above, we only read a preview
/// of this size (so we never load huge files fully into memory).
const PREVIEW_BYTES: usize = 16_384;
/// How many bytes of binary content to show in the hex dump.
const HEXDUMP_BYTES: usize = 4096;

struct FileResult {
    rel_path: PathBuf, // relative path of the original file
    out_rel: PathBuf,  // relative path of the generated .html file (inside out/)
    label: String,     // label shown in the badge (language, or "binary")
}

enum Unreadable {
    IoError(PathBuf),
}

enum Content {
    /// Successfully decoded text. `truncated` indicates whether the file
    /// is larger than what was actually read (very large files: preview only).
    Text { content: String, truncated: bool, total_size: u64 },
    /// Content that isn't valid UTF-8 text: we show a hex dump instead
    /// of trying to decode it.
    Binary { preview: Vec<u8>, total_size: u64, truncated: bool },
}

/// Reads a file safely: for small files, reads everything and classifies
/// text/binary based on the full content; for large files, reads only a
/// prefix, to avoid loading huge files into memory.
fn read_content(path: &Path, total_size: u64) -> std::io::Result<Content> {
    if total_size <= FULL_READ_LIMIT {
        let bytes = fs::read(path)?;
        match String::from_utf8(bytes) {
            Ok(s) => Ok(Content::Text {
                content: s,
                truncated: false,
                total_size,
            }),
            Err(e) => Ok(Content::Binary {
                preview: e.into_bytes(),
                total_size,
                truncated: false,
            }),
        }
    } else {
        let mut f = fs::File::open(path)?;
        let mut buf = vec![0u8; PREVIEW_BYTES];
        let n = f.read(&mut buf)?;
        buf.truncate(n);

        match std::str::from_utf8(&buf) {
            Ok(s) => Ok(Content::Text {
                content: s.to_string(),
                truncated: true,
                total_size,
            }),
            Err(e) => {
                let valid_up_to = e.valid_up_to();
                // If the error is only due to cutting a multi-byte
                // character in half (common when reading an arbitrary
                // prefix of a text file), still treat it as text.
                if valid_up_to > 0 && buf.len() - valid_up_to <= 4 {
                    let s = std::str::from_utf8(&buf[..valid_up_to]).unwrap().to_string();
                    Ok(Content::Text {
                        content: s,
                        truncated: true,
                        total_size,
                    })
                } else {
                    Ok(Content::Binary {
                        preview: buf,
                        total_size,
                        truncated: true,
                    })
                }
            }
        }
    }
}

/// Tree node used to build the index (index.html)
#[derive(Default)]
struct Node {
    dirs: BTreeMap<String, Node>,
    files: Vec<(String, String, PathBuf)>, // (display_name, label, href relative to the index)
}

impl Node {
    fn insert_file(&mut self, components: &[String], display_name: String, label: String, href: PathBuf) {
        if components.is_empty() {
            self.files.push((display_name, label, href));
        } else {
            let head = &components[0];
            let child = self.dirs.entry(head.clone()).or_default();
            child.insert_file(&components[1..], display_name, label, href);
        }
    }

    fn render(&self, out: &mut String) {
        out.push_str("<ul class=\"tree\">\n");
        for (name, node) in &self.dirs {
            out.push_str(&format!(
                "<li class=\"dir\"><span class=\"dir-name\">\u{1F4C1} {}</span>\n",
                escape_html(name)
            ));
            node.render(out);
            out.push_str("</li>\n");
        }
        for (name, label, href) in &self.files {
            out.push_str(&format!(
                "<li class=\"file\"><a href=\"{}\">\u{1F4C4} {}</a> <span class=\"badge\">{}</span></li>\n",
                href.to_string_lossy().replace('\\', "/"),
                escape_html(name),
                escape_html(label)
            ));
        }
        out.push_str("</ul>\n");
    }
}

fn main() {
    let args: Vec<String> = std::env::args().collect();
    let input_dir = args.get(1).cloned().unwrap_or_else(|| ".".to_string());
    let output_dir = args.get(2).cloned().unwrap_or_else(|| "out".to_string());
    // Extra directory names to exclude, optional, comma-separated
    // (e.g. "node_modules,.git"). Nothing is excluded by default:
    // the generator includes everything it finds, including
    // __pycache__, compiled files, binaries, etc.
    let extra_excludes: Vec<String> = args
        .get(3)
        .map(|s| s.split(',').map(|p| p.trim().to_string()).filter(|p| !p.is_empty()).collect())
        .unwrap_or_default();

    let input = PathBuf::from(&input_dir);
    let output = PathBuf::from(&output_dir);

    if !input.is_dir() {
        eprintln!("Error: '{}' is not a valid directory.", input.display());
        std::process::exit(1);
    }

    if let Err(e) = fs::create_dir_all(&output) {
        eprintln!("Error creating the output directory: {e}");
        std::process::exit(1);
    }

    // Absolute path of the output directory, so we can exclude it from the
    // scan in case it's nested inside the input directory (e.g. input=".",
    // output="out"). This is the only automatic exclusion and it can't be
    // turned off: it only prevents the program from processing the files
    // it is currently writing.
    let output_abs = fs::canonicalize(&output).unwrap_or_else(|_| output.clone());

    println!("Scanning '{}' -> '{}'", input.display(), output.display());
    if !extra_excludes.is_empty() {
        println!("Directories excluded on request: {}", extra_excludes.join(", "));
    }
    let start = Instant::now();

    let mut results: Vec<FileResult> = Vec::new();
    let mut unreadable: Vec<Unreadable> = Vec::new();
    let mut n_binary = 0usize;
    let mut n_truncated = 0usize;

    for entry in WalkDir::new(&input)
        .into_iter()
        .filter_entry(|e| {
            if e.file_type().is_dir() {
                if let Some(name) = e.file_name().to_str() {
                    if extra_excludes.iter().any(|x| x == name) {
                        return false;
                    }
                }
                if let Ok(abs) = fs::canonicalize(e.path()) {
                    if abs == output_abs {
                        return false;
                    }
                }
            }
            true
        })
    {
        let entry = match entry {
            Ok(e) => e,
            Err(_) => continue,
        };

        if !entry.file_type().is_file() {
            continue;
        }

        let path = entry.path();
        let rel_path = match path.strip_prefix(&input) {
            Ok(p) => p.to_path_buf(),
            Err(_) => path.to_path_buf(),
        };

        let meta = match fs::metadata(path) {
            Ok(m) => m,
            Err(_) => {
                unreadable.push(Unreadable::IoError(rel_path));
                continue;
            }
        };

        let content = match read_content(path, meta.len()) {
            Ok(c) => c,
            Err(_) => {
                unreadable.push(Unreadable::IoError(rel_path));
                continue;
            }
        };

        let syntax_lang = detect_language(path);

        let (body_html, label, note): (String, String, Option<String>) = match &content {
            Content::Text { content, truncated, total_size } => {
                let body = highlight_code(content, syntax_lang);
                let note = if *truncated {
                    n_truncated += 1;
                    Some(format!(
                        "Truncated preview: showing the first {} bytes out of {} total.",
                        content.len(),
                        total_size
                    ))
                } else {
                    None
                };
                (body, syntax_lang.to_string(), note)
            }
            Content::Binary { preview, total_size, truncated } => {
                n_binary += 1;
                let dump = hex_dump(preview, HEXDUMP_BYTES);
                let shown = preview.len().min(HEXDUMP_BYTES);
                let note = Some(format!(
                    "Binary file: {} bytes total. Showing the first {} bytes as hex.{}",
                    total_size,
                    shown,
                    if *truncated { " (only the first bytes of the file were read)" } else { "" }
                ));
                (escape_html(&dump), "binary".to_string(), note)
            }
        };

        let mut out_rel = rel_path.clone();
        let new_name = format!(
            "{}.html",
            out_rel.file_name().unwrap_or_default().to_string_lossy()
        );
        out_rel.set_file_name(new_name);

        let out_path = output.join(&out_rel);
        if let Some(parent) = out_path.parent() {
            let _ = fs::create_dir_all(parent);
        }

        let depth = out_rel.components().count().saturating_sub(1);
        let back_to_index = "../".repeat(depth);

        let html = render_file_html(
            &rel_path.to_string_lossy(),
            &label,
            &body_html,
            note.as_deref(),
            &back_to_index,
        );

        if fs::write(&out_path, html).is_ok() {
            results.push(FileResult {
                rel_path,
                out_rel,
                label,
            });
        }
    }

    // Build the tree for the index
    let mut root = Node::default();
    for r in &results {
        let components: Vec<String> = r
            .rel_path
            .parent()
            .map(|p| {
                p.components()
                    .map(|c| c.as_os_str().to_string_lossy().to_string())
                    .filter(|s| !s.is_empty())
                    .collect()
            })
            .unwrap_or_default();
        let display_name = r
            .rel_path
            .file_name()
            .unwrap_or_default()
            .to_string_lossy()
            .to_string();
        root.insert_file(
            &components,
            display_name,
            r.label.clone(),
            r.out_rel.clone(),
        );
    }

    let mut tree_html = String::new();
    root.render(&mut tree_html);

    let index_html = render_index_html(&tree_html, results.len(), n_binary, n_truncated);
    let _ = fs::write(output.join("index.html"), index_html);

    let elapsed = start.elapsed();
    println!(
        "Done in {:.2?}: {} files included ({} binary, {} with truncated preview), {} unreadable.",
        elapsed,
        results.len(),
        n_binary,
        n_truncated,
        unreadable.len()
    );
    for u in &unreadable {
        match u {
            Unreadable::IoError(p) => println!("  unreadable (I/O error): {}", p.display()),
        }
    }
    println!("Open {}/index.html in your browser.", output.display());
}

/// Produces a hex dump (in the style of `xxd -C`) of the first `limit` bytes.
fn hex_dump(bytes: &[u8], limit: usize) -> String {
    let show = &bytes[..bytes.len().min(limit)];
    let mut out = String::with_capacity(show.len() * 4);
    for (i, chunk) in show.chunks(16).enumerate() {
        let offset = i * 16;
        out.push_str(&format!("{:08x}  ", offset));
        for (j, b) in chunk.iter().enumerate() {
            out.push_str(&format!("{:02x} ", b));
            if j == 7 {
                out.push(' ');
            }
        }
        let missing = 16usize.saturating_sub(chunk.len());
        for _ in 0..missing {
            out.push_str("   ");
        }
        out.push_str(" |");
        for b in chunk {
            let c = *b;
            if (0x20..0x7f).contains(&c) {
                out.push(c as char);
            } else {
                out.push('.');
            }
        }
        out.push_str("|\n");
    }
    out
}

/// Determines the language (used to pick syntax-highlighting rules)
/// from the file's name/extension. This is only used when the content
/// turns out to actually be text; binary files are classified as such
/// regardless by read_content.
fn detect_language(path: &Path) -> &'static str {
    let file_name = path
        .file_name()
        .map(|s| s.to_string_lossy().to_lowercase())
        .unwrap_or_default();

    match file_name.as_str() {
        "dockerfile" => return "dockerfile",
        "makefile" | "gnumakefile" => return "makefile",
        "cmakelists.txt" => return "cmake",
        ".gitignore" | ".dockerignore" | ".npmignore" => return "plaintext",
        "cargo.toml" | "cargo.lock" => return "ini",
        _ => {}
    }

    let ext = path
        .extension()
        .map(|s| s.to_string_lossy().to_lowercase())
        .unwrap_or_default();

    match ext.as_str() {
        "py" | "pyw" | "pyi" => "python",
        "rs" => "rust",
        "js" | "mjs" | "cjs" => "javascript",
        "jsx" => "javascript",
        "ts" => "typescript",
        "tsx" => "typescript",
        "java" => "java",
        "c" => "c",
        "h" => "c",
        "hpp" | "hh" | "hxx" => "cpp",
        "cpp" | "cc" | "cxx" => "cpp",
        "cs" => "csharp",
        "go" => "go",
        "rb" => "ruby",
        "php" => "php",
        "html" | "htm" => "xml",
        "css" => "css",
        "scss" | "sass" => "scss",
        "less" => "less",
        "json" => "json",
        "xml" => "xml",
        "yaml" | "yml" => "yaml",
        "toml" | "ini" | "cfg" | "conf" => "ini",
        "sh" | "bash" | "zsh" => "bash",
        "sql" => "sql",
        "md" | "markdown" => "markdown",
        "kt" | "kts" => "kotlin",
        "swift" => "swift",
        "lua" => "lua",
        "r" => "r",
        "pl" | "pm" => "perl",
        "groovy" | "gradle" => "groovy",
        "vb" => "vbnet",
        "graphql" | "gql" => "graphql",
        "diff" | "patch" => "diff",
        "bat" | "cmd" => "dos",
        "ps1" => "powershell",
        "vue" => "xml",
        "txt" => "plaintext",
        _ => "plaintext",
    }
}

fn escape_html(s: &str) -> String {
    let mut out = String::with_capacity(s.len());
    for c in s.chars() {
        match c {
            '&' => out.push_str("&amp;"),
            '<' => out.push_str("&lt;"),
            '>' => out.push_str("&gt;"),
            '"' => out.push_str("&quot;"),
            '\'' => out.push_str("&#39;"),
            _ => out.push(c),
        }
    }
    out
}

const STYLE: &str = r#"
:root {
  --bg: #0d1117;
  --panel: #161b22;
  --text: #c9d1d9;
  --muted: #8b949e;
  --accent: #58a6ff;
  --border: #30363d;
}
* { box-sizing: border-box; }
body {
  margin: 0;
  background: var(--bg);
  color: var(--text);
  font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Helvetica, Arial, sans-serif;
}
header {
  padding: 14px 20px;
  background: var(--panel);
  border-bottom: 1px solid var(--border);
  display: flex;
  align-items: center;
  gap: 12px;
  flex-wrap: wrap;
}
header a { color: var(--accent); text-decoration: none; font-weight: 600; }
header a:hover { text-decoration: underline; }
.path { color: var(--muted); font-size: 0.9em; word-break: break-all; }
.note {
  padding: 10px 20px;
  background: #21262d;
  border-bottom: 1px solid var(--border);
  color: var(--muted);
  font-size: 0.85em;
}
main { padding: 0; }
pre {
  margin: 0;
  padding: 16px 20px 40px 20px;
  overflow-x: auto;
  font-size: 13px;
  line-height: 1.5;
}
code { font-family: "SFMono-Regular", Consolas, "Liberation Mono", Menlo, monospace; }
.container { max-width: 1000px; margin: 30px auto; padding: 0 20px 60px; }
h1 { font-size: 1.6em; }
.meta { color: var(--muted); font-size: 0.9em; margin-bottom: 20px; }
ul.tree { list-style: none; padding-left: 18px; margin: 6px 0; }
ul.tree > li { margin: 4px 0; }
.dir-name { font-weight: 600; color: var(--text); }
.file a { color: var(--accent); text-decoration: none; }
.file a:hover { text-decoration: underline; }
.badge {
  display: inline-block;
  font-size: 0.72em;
  color: var(--muted);
  border: 1px solid var(--border);
  border-radius: 10px;
  padding: 1px 8px;
  margin-left: 6px;
}
.skipped { color: var(--muted); font-size: 0.85em; margin-top: 30px; }

/* Syntax highlighting: generated in Rust, no JavaScript involved. */
.c { color: #8b949e; font-style: italic; }
.s { color: #a5d6ff; }
.n { color: #79c0ff; }
.k { color: #ff7b72; font-weight: 600; }
"#;

fn render_file_html(rel_path: &str, label: &str, body_html: &str, note: Option<&str>, back_to_index: &str) -> String {
    let title = escape_html(rel_path);
    let note_html = match note {
        Some(n) => format!("<div class=\"note\">{}</div>\n", escape_html(n)),
        None => String::new(),
    };
    format!(
        r#"<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<title>{title}</title>
<style>{STYLE}</style>
</head>
<body>
<header>
  <a href="{back_to_index}index.html">&larr; Index</a>
  <span class="path">{title}</span>
  <span class="badge">{label}</span>
</header>
{note_html}<main>
<pre><code>{body_html}</code></pre>
</main>
</body>
</html>
"#
    )
}

fn render_index_html(tree_html: &str, n_ok: usize, n_binary: usize, n_truncated: usize) -> String {
    let mut extra = String::new();
    if n_binary > 0 {
        extra.push_str(&format!(
            "<p class=\"skipped\">{} binary files included with a hex-dump preview.</p>",
            n_binary
        ));
    }
    if n_truncated > 0 {
        extra.push_str(&format!(
            "<p class=\"skipped\">{} very large files shown as a truncated preview only.</p>",
            n_truncated
        ));
    }

    let folder_emoji = '\u{1F4C2}';
    format!(
        r#"<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<title>Source index</title>
<style>{STYLE}</style>
</head>
<body>
<div class="container">
<h1>{folder_emoji} Source index</h1>
<p class="meta">{n_ok} files included in total.</p>
{tree_html}
{extra}
</div>
</body>
</html>
"#
    )
}