Victor Eijkhout

47 papers A 2C 2Misc 3Journal 23Unranked 11
YearRankTypeTitle / Venue / Authors
2024 conf
SC Workshops
Victor Eijkhout, Yojan Chitkara, Daksh Chaplot
2022 J jnl
CoRR
Mark F. Adams, Satish Balay, Oana Marin, Lois Curfman McInnes, Richard Tran Mills, Todd S. Munson, Hong Zhang, Junchao Zhang, Jed Brown, Victor Eijkhout, Jacob Faibussowitsch, Matthew G. Knepley, Fande Kong, Scott Kruger, Patrick Sanan, Barry F. Smith, Hong Zhang
2022 J jnl
Comput. Sci. Eng.
Mark F. Adams, Satish Balay, Oana Marin, Lois Curfman McInnes, Richard Tran Mills, Todd S. Munson, Hong Zhang, Junchao Zhang, Jed Brown, Victor Eijkhout, Jacob Faibussowitsch, Matthew G. Knepley, Fande Kong, Scott Kruger, Patrick Sanan, Barry F. Smith, Hong Zhang
2021 J jnl
Medical Image Anal.
Chengyue Wu, David A. Hormuth II, Ty Easley, Victor Eijkhout, Federico Pineda, Gregory S. Karczmar, Thomas E. Yankeelov
2021 conf
PEARC
Si Liu, Victor Eijkhout, John Cazes
2020 conf
PEARC Companion
Victor Eijkhout, Amit Ruhela
2020 conf
IPDPS Workshops
Yu Pei, Qinglei Cao, George Bosilca, Piotr Luszczek, Victor Eijkhout, Jack J. Dongarra
2020 conf
PEARC
Christiaan P. Gribble, Victor Eijkhout, Paul A. Navrátil
2020 conf
IPDPS Workshops
Victor Eijkhout
2019 J jnl
CoRR
Victor Eijkhout, Margaret Myers, John D. McCalpin
2018 J jnl
CoRR
Victor Eijkhout
2018 J jnl
CoRR
Victor Eijkhout
2018 J jnl
J. Parallel Distributed Comput.
Victor Eijkhout
2016 J jnl
CoRR
Victor Eijkhout
2016 conf
EduHPC@SC
Victor Eijkhout
2014 C conf
ISPDC
Victor Eijkhout
2014 J jnl
ACM Trans. Math. Softw.
Kyungjoo Kim, Victor Eijkhout
2013 conf
IPDPS Workshops
Kyungjoo Kim, Victor Eijkhout
2012 Misc conf
ICCS
Victor Eijkhout
2012 ch.
High-Performance Scientific Computing
Victor Eijkhout, Robert A. van de Geijn
2011 J jnl
CoRR
Julio Enrique Castrillón-Candás, Jun Li, Victor Eijkhout
2010 ch.
Software Automatic Tuning, From Concepts to State-of-the-Art Results
Sanjukta Bhowmick, Victor Eijkhout, Yoav Freund, Erika Fuentes, David E. Keyes
2010 Misc conf
ICCS
Victor Eijkhout, Paolo Bientinesi, Robert A. van de Geijn
2009 J jnl
ACM Trans. Math. Softw.
Victor Eijkhout, Erika Fuentes
2008 C conf
ICMLA
Victor Eijkhout, Erika Fuentes
2007 J jnl
Int. J. High Perform. Comput. Appl.
Alfredo Buttari, Victor Eijkhout, Julien Langou, Salvatore Filippone
2006 ch.
Parallel Processing for Scientific Computing
Victor Eijkhout, Julien Langou, Jack J. Dongarra
2006 J jnl
IBM J. Res. Dev.
Jack J. Dongarra, George Bosilca, Zizhong Chen, Victor Eijkhout, Graham E. Fagg, Erika Fuentes, Julien Langou, Piotr Luszczek, Jelena Pjesivac-Grbovic, Keith Seymour, Haihang You, Sathish S. Vadhiyar
2005 J jnl
Proc. IEEE
Richard Carl Demmel, Jack J. Dongarra, Victor Eijkhout, Erika Fuentes, Antoine Petitet, Richard W. Vuduc, R. Clint Whaley, Katherine A. Yelick
2005 J jnl
Int. J. Parallel Program.
Victor Eijkhout, Erika Fuentes, Thomas Eidson, Jack J. Dongarra
2004 conf
IPDPS Next Generation Software Program - NSFNGS - PI Workshop
Thomas Eidson, Victor Eijkhout, Jack J. Dongarra
2003 A conf
IPDPS
Thomas Eidson, Jack J. Dongarra, Victor Eijkhout
2003 Misc conf
International Conference on Computational Science
Jack J. Dongarra, Victor Eijkhout
2003 J jnl
Int. J. High Perform. Comput. Appl.
Jack J. Dongarra, Victor Eijkhout
2001 J jnl
Sci. Program.
Jack J. Dongarra, Victor Eijkhout, Henk A. van der Vorst
2001 J jnl
Sci. Program.
Jack J. Dongarra, Victor Eijkhout, Piotr Luszczek
2000 J jnl
Int. J. High Perform. Comput. Appl.
Tony F. Chan, Victor Eijkhout
1999 conf
PP
Victor Eijkhout
1994 book
Richard F. Barrett, Michael W. Berry, Tony F. Chan, James Demmel, June M. Donato, Jack J. Dongarra, Victor Eijkhout, Roldan Pozo, Charles H. Romine, Henk A. van der Vorst
1993 conf
PPSC
Eduardo F. D'Azevedo, Victor Eijkhout, Charles H. Romine
1991 book
Tex by topic - a texnicians's reference.
Victor Eijkhout
1991 J jnl
SIAM J. Sci. Comput.
Owe Axelsson, Victor Eijkhout
1991 J jnl
SIAM Rev.
Victor Eijkhout, Panayot S. Vassilevski
1990 A conf
ICS
Victor Eijkhout
1990
Victor Eijkhout
1989 J jnl
Parallel Comput.
Victor Eijkhout, Panayot S. Vassilevski
1986 J jnl
Parallel Comput.
Owe Axelsson, Victor Eijkhout
redb/extractors/pe_extractors/pe_dotnet.py
← Index redb/extractors/pe_extractors/pe_dotnet.py python
import inspect
import pefile
from dotnetfile import DotNetPE

import base64
from hashlib import md5
from pprint import pprint

import magic
import pefile

from redb.extractors.enum import Tag
from redb.extractors.pe_extractor import PEExtractor
from redb.models.dataclasses import PEDotNet
from datetime import datetime, timezone
import json
from typing import Any


class PEDotNetExtractor(PEExtractor):

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
        pe=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters,
            index_prefix,
            elastic_index,
            known_benign,
            known_malicious,
            pe,
        )
        # self.pe_features = None
        self.elastic_index = self.index_prefix + "-pe_dotnet"
        self.dotnet, self.error = self._generate_dotnetfile_object()
        self.log.debug(inspect.currentframe().f_code.co_name)

    def _decode_assembly_flags(self, flag_value):
        self.log.debug(inspect.currentframe().f_code.co_name)
        ASSEMBLY_FLAGS = {
            0x00000001: "COMIMAGE_FLAGS_ILONLY",
            0x00000002: "COMIMAGE_FLAGS_32BITREQUIRED",
            0x00000004: "COMIMAGE_FLAGS_IL_LIBRARY",
            0x00000008: "COMIMAGE_FLAGS_STRONGNAMESIGNED",
            0x00000010: "COMIMAGE_FLAGS_NATIVE_ENTRYPOINT",
            0x00010000: "COMIMAGE_FLAGS_TRACKDEBUGDATA",
            0x00020000: "COMIMAGE_FLAGS_32BITPREFERRED",
        }
        flags = []
        for bit, name in ASSEMBLY_FLAGS.items():
            if flag_value & bit:
                flags.append(name)
        return flags

    def _normalize_data(self, data):
        self.log.debug(inspect.currentframe().f_code.co_name)
        if isinstance(data, str):
            return {"value": data}
        return data

    def _compute_md5(self, data):
        self.log.debug(inspect.currentframe().f_code.co_name)
        if isinstance(data, str):
            # If it's a string, encode it to first
            return md5(data.encode("raw_unicode_escape")).hexdigest()
        elif not isinstance(data, bytes):
            # If it's neither string nor bytes, convert it to string and then to bytes
            return md5(str(data).encode("raw_unicode_escape")).hexdigest()
        else:
            return md5(data).hexdigest()

    def tag(self):
        return Tag.PE_DOTNET.value

    def extract(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        metadata = {}

        if self.error:
            metadata["Corrupted"] = self.error.args[0]
            dotnet = PEDotNet(metadata)
            self.dotnet = dotnet  # Store for later use in prepare_export_data
            return dotnet  # Return the extracted data instead of exporting directly

        metadata["info"] = {}
        try:
            available_tables = self.dotnet.existent_metadata_tables()
        except Exception as e:
            self.log.error(f"Error getting metadata tables for {self.hash.sha256}: {e}")
            available_tables = []
            metadata["info"]["PotentiallyCorrupted"] = True

        # GUID extraction
        try:
            input_string = self.dotnet.guid_stream_guids[0].string_representation
            
            formatted_uuid = (
                f"{input_string[6:8]}{input_string[4:6]}{input_string[2:4]}{input_string[0:2]}"
                f"-{input_string[10:12]}{input_string[8:10]}"
                f"-{input_string[14:16]}{input_string[12:14]}"
                f"-{input_string[16:20]}"
                f"-{input_string[20:]}"
            )
            metadata["info"]["ModuleVersionID"] = formatted_uuid
        except Exception as e:
            self.log.error(f"Error extracting GUID for {self.hash.sha256}: {e}")

        # CLR Version
        try:
            metadata["info"]["CLRversion"] = self.dotnet.get_runtime_target_version()
        except Exception as e:
            self.log.error(f"Error getting CLR version for {self.hash.sha256}: {e}")

        # Module information
        try:
            if self.dotnet.metadata_table_exists("Module"):
                metadata["info"]["AssemblyModuleName"] = self.dotnet.Module.get_module_name()
        except Exception as e:
            self.log.error(f"Error getting module info for {self.hash.sha256}: {e}")

        # Basic properties
        try:
            metadata["info"].update({
                "IsNativeNgenImage": self.dotnet.is_native_image(),
                "IsMixedAssembly": self.dotnet.is_mixed_assembly(),
                "IsWindowsFormsApp": self.dotnet.is_windows_forms_app(),
                "EntryPointToken": self.dotnet.clr_header.EntryPointToken.value,
                "HasNativeEntryPoint": self.dotnet.has_native_entry_point(),
            })
        except Exception as e:
            self.log.error(f"Error getting basic properties for {self.hash.sha256}: {e}")

        # Assembly flags
        try:
            metadata["info"]["AssemblyFlags"] = self._decode_assembly_flags(
                self.dotnet.clr_header.Flags.value
            )
        except Exception as e:
            self.log.error(f"Error getting assembly flags for {self.hash.sha256}: {e}")

        # More Metadata/Info CLR Header
        try:
            metadata["info"]["NumOfStreams"] = self.dotnet.get_number_of_streams()
            # [TODO] The following two on VT are "RVA entry point"
            #  and "Resources va" respectively. To verify.
            metadata["info"][
                "ResourcesDirectoryAddress"
            ] = self.dotnet.clr_header.ResourcesDirectoryAddress.value
            metadata["info"][
                "ResourcesDirectorySize"
            ] = self.dotnet.clr_header.ResourcesDirectorySize.value
            metadata["info"][
                "StrongNameSignatureAddress"
            ] = self.dotnet.clr_header.StrongNameSignatureAddress.value
            metadata["info"][
                "StrongNameSignatureSize"
            ] = self.dotnet.clr_header.StrongNameSignatureSize.value
            metadata["info"][
                "CodeManagerTableAddress"
            ] = self.dotnet.clr_header.CodeManagerTableAddress.value
            metadata["info"][
                "CodeManagerTableSize"
            ] = self.dotnet.clr_header.CodeManagerTableSize.value
            metadata["info"][
                "VTableFixupsAddress"
            ] = self.dotnet.clr_header.VTableFixupsAddress.value
            metadata["info"][
                "VTableFixupsSize"
            ] = self.dotnet.clr_header.VTableFixupsSize.value
            metadata["info"][
                "ExportAddressTableJumpsAddress"
            ] = self.dotnet.clr_header.ExportAddressTableJumpsAddress.value
            metadata["info"][
                "ExportAddressTableJumpsSize"
            ] = self.dotnet.clr_header.ExportAddressTableJumpsSize.value
            metadata["info"][
                "ManagedNativeHeaderAddress"
            ] = self.dotnet.clr_header.ManagedNativeHeaderAddress.value
            metadata["info"][
                "ManagedNativeHeaderSize"
            ] = self.dotnet.clr_header.ManagedNativeHeaderSize.value
        except Exception as e:
            self.log.error(f"Error getting more metadata/info clr header for {self.hash.sha256}: {e}")

        # Streams section
        try:
            metadata["Streams"] = {}
            stream_names = self.dotnet.get_stream_names()
            for name in stream_names:
                indx = stream_names.index(name)
                stream_header = self.dotnet.dotnet_stream_headers[indx]
                stream_address = self.dotnet.dotnet_streams[indx].address
                metadata["Streams"][name] = {}
                metadata["Streams"][name]["raw_name"] = base64.b64encode(
                    stream_header.Name.value
                ).decode()
                # metadata["Streams"][name]["raw_name"] = name
                metadata["Streams"][name]["size"] = stream_header.Size.value
                # Retrieve the stream data directly using the given address and size
                stream_data = self.pe.get_data(stream_address, stream_header.Size.value)
                metadata["Streams"][name]["entropy"] = (
                    "%.2f" % pefile.SectionStructure.entropy_H(self.pe, stream_data)
                )
                metadata["Streams"][name]["md5"] = md5(stream_data).hexdigest()
        except Exception as e:
            self.log.error(f"Error getting streams for {self.hash.sha256}: {e}")

        # ManifestResource
        try:
            metadata["ManifestResource"] = ()
            if "ManifestResource" in available_tables:
                metadata["info"]["HasManifestResource"] = True
                metadata["ManifestResource"] = (
                    self.dotnet.ManifestResource.get_resource_names()
                )
        except Exception as e:
            self.log.error(f"Error getting manifest resource for {self.hash.sha256}: {e}")

        # ExternalAssemblyRef
        try:
            metadata["ExternalAssemblyRef"] = {}
            if "AssemblyRef" in available_tables:
                metadata["ExternalAssemblyRef"][
                    "names"
                ] = self.dotnet.AssemblyRef.get_assemblyref_names()
                metadata["ExternalAssemblyRef"][
                    "cultures"
                ] = self.dotnet.AssemblyRef.get_assemblyref_cultures()
        except Exception as e:
            self.log.error(f"Error getting external assembly ref for {self.hash.sha256}: {e}")

        # AssemblyData
        try:
            metadata["AssemblyData"] = {}
            if "Assembly" in available_tables:
                metadata["AssemblyData"][
                    "name"
                ] = self.dotnet.Assembly.get_assembly_name()
                # It's officially a one-row table, but there are ITW files with more than one row.
                # It stores information about the current assembly. It is documented in ECMA-335.
                assembly_table = self.dotnet.metadata_tables_lookup[
                    "Assembly"
                ].table_rows[0]
                metadata["AssemblyData"][
                    "MajorVersion"
                ] = assembly_table.MajorVersion.value
                metadata["AssemblyData"][
                    "MinorVersion"
                ] = assembly_table.MinorVersion.value
                metadata["AssemblyData"]["hashalgid"] = assembly_table.HashAlgId.value
                metadata["AssemblyData"][
                    "BuildNumber"
                ] = assembly_table.BuildNumber.value
                metadata["AssemblyData"][
                    "RevisionNumber"
                ] = assembly_table.RevisionNumber.value
                metadata["AssemblyData"][
                    "culture"
                ] = self.dotnet.Assembly.get_assembly_culture()
        except Exception as e:
            self.log.error(f"Error getting assembly data for {self.hash.sha256}: {e}")

        # TypeDef handling
        try:
            metadata["TypeDef"] = {}
            if "TypeDef" in available_tables:
                metadata["info"]["HasTypeDef"] = True
                # Get basic type definitions
                try:
                    # Get all types (ANY visibility)
                    type_defs = self.dotnet.TypeDef.get_type_names()
                    metadata["TypeDef"]["names"] = type_defs if type_defs else []
                    
                    # Get detailed type information with methods
                    types_with_methods = self.dotnet.TypeDef.get_type_names_with_methods()
                    if types_with_methods:
                        metadata["TypeDef"]["detailed"] = []
                        for type_info in types_with_methods:
                            type_data = {
                                "type": type_info.Type,
                                "namespace": type_info.Namespace,
                                "flags": type_info.Flags,
                                "methods": []
                            }
                            for method in type_info.Methods:
                                method_data = {
                                    "name": method.Name,
                                    "flags": method.Flags
                                }
                                if method.Signature:
                                    method_data["signature"] = {
                                        "parameters": method.Signature.get("parameter", []),
                                        "return_type": method.Signature.get("return", ""),
                                        "has_this": method.Signature.get("hasthis", False)
                                    }
                                type_data["methods"].append(method_data)
                            metadata["TypeDef"]["detailed"].append(type_data)
                except AttributeError as e:
                    self.log.warning(f"TypeDef table exists but attributes missing for {self.hash.sha256}: {e}")
                    # metadata["info"]["TypeDefParsingError"] = f"Missing attributes: {str(e)}"
                except Exception as e:
                    self.log.error(f"Error parsing TypeDef table for {self.hash.sha256}: {e}")
                    # metadata["info"]["TypeDefParsingError"] = str(e)
        except Exception as e:
            self.log.error(f"Error handling TypeDef section for {self.hash.sha256}: {e}")
            metadata["TypeDef"] = {"names": [], "detailed": []}
            # metadata["info"]["TypeDefParsingError"] = str(e)

        # ExternalUnmanagedModules
        try:
            metadata["ExternalUnmanagedModules"] = ()
            if "ModuleRef" in available_tables:
                metadata["info"]["HasModuleRef"] = True
                metadata["ExternalUnmanagedModules"] = (
                    self.dotnet.ModuleRef.get_unmanaged_module_names(
                        self.dotnet.Type.UnmanagedModules.RAW
                    )
                )
        except Exception as e:
            self.log.error(f"Error getting external unmanaged modules for {self.hash.sha256}: {e}")

        # ExternalUnmanagedMethods
        try:
            metadata["ExternalUnmanagedMethods"] = ()
            if "ImplMap" in available_tables:
                metadata["info"]["HasImplMap"] = True
                metadata["ExternalUnmanagedMethods"] = (
                    self.dotnet.ImplMap.get_unmanaged_functions()
                )
        except Exception as e:
            self.log.error(f"Error getting external unmanaged methods for {self.hash.sha256}: {e}")

        # Event
        try:
            metadata["Event"] = ()
            if "Event" in available_tables:
                metadata["info"]["HasEvent"] = True
                metadata["Event"] = self.dotnet.Event.get_event_names()
        except Exception as e:
            self.log.error(f"Error getting event for {self.hash.sha256}: {e}")

        # Resources
        try:
            metadata["Resources"] = []
            if self.dotnet.has_resources():
                tmp_resources_list = []
                resource_data = self.dotnet.get_resources()
                for data in resource_data:
                    tmp_dict = {}
                    for resource_item in data.items():
                        if resource_item[0] == "SubResources":
                            if resource_item[1]:
                                tmp_dict["SubResources"] = {}
                                for sub_resource in resource_item[1]:
                                    for sub_resource_item in sub_resource.items():
                                        if sub_resource_item[0] == "Data":
                                            # Check if data is a sequence type that supports len()
                                            if hasattr(sub_resource_item[1], '__len__') and len(sub_resource_item[1]) > 100:
                                                tmp_dict["SubResources"]["Data"] = {}
                                                try:
                                                    # tmp_dict["SubResources"]["Data"][
                                                    #     "md5"
                                                    # ] = md5(
                                                    #     sub_resource_item[1].encode()
                                                    # ).hexdigest()
                                                    tmp_dict["SubResources"]["Data"][
                                                        "md5"
                                                    ] = self._compute_md5(
                                                        sub_resource_item[1]
                                                    )
                                                except Exception as e:
                                                    self.log.error(
                                                        f"Error in dotnet resources"
                                                        f" extraction {self.hash.sha256}: {e}"
                                                    )
                                                guess = magic.from_buffer(
                                                    sub_resource_item[1], mime=True
                                                )
                                                tmp_dict["SubResources"]["Data"][
                                                    "MimeType"
                                                ] = (guess if guess else None)
                                            else:
                                                normalized_data = self._normalize_data(
                                                    sub_resource_item[1].decode()
                                                    if isinstance(
                                                        sub_resource_item[1], bytes
                                                    )
                                                    else sub_resource_item[1]
                                                )
                                                tmp_dict["SubResources"][
                                                    sub_resource_item[0]
                                                ] = normalized_data
                                        else:
                                            tmp_dict["SubResources"][
                                                sub_resource_item[0]
                                            ] = (
                                                sub_resource_item[1].decode()
                                                if isinstance(
                                                    sub_resource_item[1], bytes
                                                )
                                                else sub_resource_item[1]
                                            )
                        elif resource_item[0] == "Data":
                            # Check if data is a sequence type that supports len()
                            if hasattr(resource_item[1], '__len__') and len(resource_item[1]) > 100:
                                tmp_dict["Data"] = {}
                                tmp_dict["Data"]["md5"] = self._compute_md5(
                                    resource_item[1]
                                )
                                guess = magic.from_buffer(resource_item[1], mime=True)
                                tmp_dict["Data"]["MimeType"] = guess if guess else None
                            else:
                                normalized_data = self._normalize_data(
                                    resource_item[1].decode()
                                    if isinstance(resource_item[1], bytes)
                                    else resource_item[1]
                                )
                                tmp_dict["Data"] = normalized_data
                        else:
                            tmp_dict[resource_item[0]] = (
                                resource_item[1].decode()
                                if isinstance(resource_item[1], bytes)
                                else resource_item[1]
                            )
                    tmp_resources_list.append(tmp_dict)
                metadata["Resources"] = tmp_resources_list
        except Exception as e:
            self.log.error(f"Error getting resources for {self.hash.sha256}: {e}")
            metadata["Resources"] = []  # Ensure we always have a valid list even on error

        dotnet = PEDotNet(metadata)
        self.dotnet = dotnet  # Store for later use in prepare_export_data
        return dotnet  # Return the extracted data instead of exporting directly


    def prepare_export_data(self, exporter_type: str) -> Any:
        if exporter_type == "ElasticsearchExporter":
            return self.dotnet
        elif exporter_type == "ClickHouseExporter":
            # Convert metadata to JSON string
            metadata_json = json.dumps(self.dotnet.dotnet)
            
            data = [[
                self.sha256,
                self.md5,
                self.sha1,
                metadata_json,
                datetime.now(timezone.utc)
            ]]
            
            column_names = [
                'sha256', 'md5', 'sha1', 'dotnet', 'analysis_date'
            ]
            
            if not data:
                return None

            column_type_names = [
                'String', 'String', 'String', 'JSON', 'DateTime64(3, \'UTC\')'
            ]

            return (data, column_names, column_type_names)

    def get_clickhouse_table(self) -> str:
        return "redb_pe_dotnet"