Vasilis Z. Marmarelis

77 papers B 3Journal 52Unranked 22
YearRankTypeTitle / Venue / Authors
2024 J jnl
Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall of stimulus features and categories.
Frontiers Comput. Neurosci.
Brent M. Roeder, Xiwei She, Alexander S. Dakos, Bryan Moore, Robert T. Wicks, Mark R. Witcher, Daniel E. Couture, Adrian W. Laxton, Heidi M. Munger Clary, Gautam Popli, Charles Liu, Brian Lee, Christianne Heck, George Nune, Hui Gong, Susan Shaw, Vasilis Z. Marmarelis, Theodore W. Berger, Sam A. Deadwyler, Dong Song, Robert E. Hampson
2021 J jnl
Closed-Loop Dynamic Modeling of the Heart-Rate Reflex to Concurrent Spontaneous Changes of Arterial Blood Pressure and CO2 Tension: Quantification of the Effects of Mild Cognitive Impairment.
IEEE Trans. Biomed. Eng.
Vasilis Z. Marmarelis, Dae C. Shin, Rong Zhang
2019 — conf
Closed-loop modeling of the heart-rate reflex for improved diagnosis and monitoring of Mild Cognitive Impairment.
EMBC
Vasilis Z. Marmarelis, Dae C. Shin, Rong Zhang
2019 J jnl
Multi-Input, Multi-Output Neuronal Mode Network Approach to Modeling the Encoding Dynamics and Functional Connectivity of Neural Systems.
Neural Comput.
Kunling Geng, Dae C. Shin, Dong Song, Robert E. Hampson, Samuel A. Deadwyler, Theodore W. Berger, Vasilis Z. Marmarelis
2018 J jnl
Designing Patient-Specific Optimal Neurostimulation Patterns for Seizure Suppression.
Neural Comput.
Roman A. Sandler, Kunling Geng, Dong Song, Robert E. Hampson, Mark R. Witcher, Sam A. Deadwyler, Theodore W. Berger, Vasilis Z. Marmarelis
2018 J jnl
Mechanism-Based and Input-Output Modeling of the Key Neuronal Connections and Signal Transformations in the CA3-CA1 Regions of the Hippocampus.
Neural Comput.
Kunling Geng, Dae C. Shin, Dong Song, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger, Vasilis Z. Marmarelis
2017 J jnl
Cannabinoids disrupt memory encoding by functionally isolating hippocampal CA1 from CA3.
PLoS Comput. Biol.
Roman A. Sandler, Dustin Fetterhoff, Robert E. Hampson, Sam A. Deadwyler, Vasilis Z. Marmarelis
2017 J jnl
Compartmental and Data-Based Modeling of Cerebral Hemodynamics: Nonlinear Analysis.
IEEE Trans. Biomed. Eng.
Brandon C. Henley, Dae C. Shin, Rong Zhang, Vasilis Z. Marmarelis
2017 J jnl
Methodology of Recurrent Laguerre-Volterra Network for Modeling Nonlinear Dynamic Systems.
IEEE Trans. Neural Networks Learn. Syst.
Kunling Geng, Vasilis Z. Marmarelis
2017 J jnl
Multiscale modeling in the clinic: diseases of the brain and nervous system.
Brain Informatics
William W. Lytton, Jeff Arle, Georgiy V. Bobashev, Songbai Ji, Tara L. Klassen, Vasilis Z. Marmarelis, James S. Schwaber, Mohamed A. Sherif, Terence D. Sanger
2017 J jnl
Nonparametric Model of Smooth Muscle Force Production During Electrical Stimulation.
J. Comput. Biol.
Marc Cole, Steffen E. Eikenberry, Takahide Kato, Roman A. Sandler, Stanley M. Yamashiro, Vasilis Z. Marmarelis
2016 J jnl
Calibration of a microdialysis sensor and recursive glucose level estimation in ICU patients using Kalman and particle filtering.
Biomed. Signal Process. Control.
Alexandros C. Charalampidis, Konstantinos Pontikis, Georgios D. Mitsis, George Dimitriadis, Vaia Lampadiari, Vasilis Z. Marmarelis, Apostolos Armaganidis, George P. Papavassilopoulos
2016 — conf
Decoding memory features from hippocampal spiking activities using sparse classification models.
EMBC
Dong Song, Robert E. Hampson, Brian S. Robinson, Vasilis Z. Marmarelis, Sam A. Deadwyler, Theodore W. Berger
2015 J jnl
Compartmental and Data-Based Modeling of Cerebral Hemodynamics: Linear Analysis.
IEEE Access
Brandon C. Henley, Dae C. Shin, Rong Zhang, Vasilis Z. Marmarelis
2015 J jnl
Model-based asessment of an in-vivo predictive relationship from CA1 to CA3 in the rodent hippocampus.
J. Comput. Neurosci.
Roman A. Sandler, Dong Song, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger, Vasilis Z. Marmarelis
2015 — conf
Nonlinear dynamical modeling of human hippocampal CA3-CA1 functional connectivity for memory prostheses.
NER
Dong Song, Robert E. Hampson, Brian S. Robinson, Ioan Opris, Vasilis Z. Marmarelis, Sam A. Deadwyler, Theodore W. Berger
2015 J jnl
Principal Dynamic Mode Analysis of the Hodgkin-Huxley Equations.
Int. J. Neural Syst.
Steffen E. Eikenberry, Vasilis Z. Marmarelis
2015 — conf
Sparse generalized volterra model of human hippocampal spike train transformation for memory prostheses.
EMBC
Dong Song, Brian S. Robinson, Robert E. Hampson, Vasilis Z. Marmarelis, Sam A. Deadwyler, Theodore W. Berger
2014 J jnl
On parsing the neural code in the prefrontal cortex of primates using principal dynamic modes.
J. Comput. Neurosci.
Vasilis Z. Marmarelis, Dae C. Shin, Dong Song, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2014 J jnl
Time-Varying Modeling of Cerebral Hemodynamics.
IEEE Trans. Biomed. Eng.
Vasilis Z. Marmarelis, Dae C. Shin, Melissa Orme, Rong Zhang
2013 J jnl
A nonlinear autoregressive Volterra model of the Hodgkin-Huxley equations.
J. Comput. Neurosci.
Steffen E. Eikenberry, Vasilis Z. Marmarelis
2013 — conf
Conformal ceramic electrodes that record glutamate release and corresponding neural activity in primate prefrontal cortex.
EMBC
Robert E. Hampson, Joshua L. Fuqua, Peter F. Huettl, Ioan Opris, Dong Song, Dae C. Shin, Vasilis Z. Marmarelis, Theodore W. Berger, Greg A. Gerhardt, Sam A. Deadwyler
2013 J jnl
Identification of sparse neural functional connectivity using penalized likelihood estimation and basis functions.
J. Comput. Neurosci.
Dong Song, Haonan Wang, Catherine Y. Tu, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2013 J jnl
Nonlinear modeling of dynamic interactions within neuronal ensembles using Principal Dynamic Modes.
J. Comput. Neurosci.
Vasilis Z. Marmarelis, Dae C. Shin, Dong Song, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2012 — conf
Analog low-power hardware implementation of a Laguerre-Volterra model of intracellular subthreshold neuronal activity.
EMBC
Viviane S. Ghaderi, Shane M. Roach, Dong Song, Vasilis Z. Marmarelis, John Choma Jr., Theodore W. Berger
2012 — conf
Functional connectivity between Layer 2/3 and Layer 5 neurons in prefrontal cortex of nonhuman primates during a delayed match-to-sample task.
EMBC
Dong Song, Ioan Opris, Rosa H. M. Chan, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2011 — conf
Diagnostic biomarkers for Alzheimer's disease using dynamic nonlinear models based on principal dynamic modes.
EMBC
Vasilis Z. Marmarelis, Dae C. Shin, Ramon Diaz-Arrastia, R. Zhang
2011 — conf
Dynamic nonlinear modeling of interactions between neuronal ensembles using principal dynamic modes.
EMBC
Vasilis Z. Marmarelis, Dae C. Shin, Dong Song, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2011 J jnl
Editorial: Special Issue on Multiscale Modeling and Analysis in Computational Biology and Medicine - Part-1.
IEEE Trans. Biomed. Eng.
Alejandro F. Frangi, Jean-Louis Coatrieux, Grace C. Y. Peng, David Z. D'Argenio, Vasilis Z. Marmarelis, Anushka Michailova
2011 J jnl
Editorial: TBME Letters Special Issue on Multiscale Modeling and Analysis in Computational Biology and Medicine - Part-2.
IEEE Trans. Biomed. Eng.
Jean-Louis Coatrieux, Alejandro F. Frangi, Grace C. Y. Peng, David Z. D'Argenio, Vasilis Z. Marmarelis, Anushka Michailova
2011 — conf
Estimation and statistical validation of event-invariant nonlinear dynamic models of hippocampal CA3-CA1 population activities.
EMBC
Dong Song, Rosa H. M. Chan, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2011 — conf
Restorative encoding memory integrative neural device: "REMIND".
EMBC
Robert E. Hampson, Vasilis Z. Marmarelis, Dae C. Shin, Greg A. Gerhardt, Dong Song, Rosa H. M. Chan, A. J. Sweatt, John J. Granacki, Theodore W. Berger, Sam A. Deadwyler
2010 J jnl
The Neurobiological Basis of Cognition: Identification by Multi-Input, Multioutput Nonlinear Dynamic Modeling.
Proc. IEEE
Theodore W. Berger, Dong Song, Rosa H. M. Chan, Vasilis Z. Marmarelis
2009 J jnl
Image fusion methodology for efficient interpretation of multiband images in 3D high-resolution ultrasonic transmission tomography.
Int. J. Imaging Syst. Technol.
Jeong-Won Jeong, Dae C. Shin, Vasilis Z. Marmarelis
2009 — conf
Multi-Input, Multi-Output Nonlinear Dynamic Modeling to Identify Biologically-Based Transformations as the "Cognitive Processes" Represented by the Ensemble Coding of Neuron Populations.
AAAI Fall Symposium: Biologically Inspired Cognitive Architectures
Theodore W. Berger, Dong Song, Vasilis Z. Marmarelis
2009 J jnl
Nonlinear Modeling of the Dynamic Effects of Infused Insulin on Glucose: Comparison of Compartmental With Volterra Models.
IEEE Trans. Biomed. Eng.
Georgios D. Mitsis, Mihalis G. Markakis, Vasilis Z. Marmarelis
2009 J jnl
Nonlinear modeling of neural population dynamics for hippocampal prostheses.
Neural Networks
Dong Song, Rosa H. M. Chan, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2009 J jnl
Parametric and non-parametric modeling of short-term synaptic plasticity. Part I: computational study.
J. Comput. Neurosci.
Dong Song, Vasilis Z. Marmarelis, Theodore W. Berger
2009 J jnl
Parametric and non-parametric modeling of short-term synaptic plasticity. Part II: Experimental study.
J. Comput. Neurosci.
Dong Song, Zhuo Wang, Vasilis Z. Marmarelis, Theodore W. Berger
2008 J jnl
Modeling the Nonlinear Properties of the
IEEE Trans. Biomed. Eng.
Angelika Dimoka, Spiros H. Courellis, Ghassan I. Gholmieh, Vasilis Z. Marmarelis, Theodore W. Berger
2007 J jnl
Nonlinear Dynamic Modeling of Spike Train Transformations for Hippocampal-Cortical Prostheses.
IEEE Trans. Biomed. Eng.
Dong Song, Rosa H. M. Chan, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2007 J jnl
Principal dynamic mode analysis of action potential firing in a spider mechanoreceptor.
Biol. Cybern.
Georgios D. Mitsis, Andrew S. French, Ulli Höger, Spiros H. Courellis, Vasilis Z. Marmarelis
2006 — conf
A multi-input modeling approach to quantify hippocampal nonlinear dynamic transformations.
EMBC
Theodoros P. Zanos, Spiros H. Courellis, Robert E. Hampson, Sam A. Deadwyler, Vasilis Z. Marmarelis, Theodore W. Berger
2006 — conf
Boolean Modeling of Neural Systems with Point-Process Inputs and Outputs.
EMBC
Vasilis Z. Marmarelis, Theodoros P. Zanos, Spiros H. Courellis, Theodore W. Berger
2006 — conf
Interaction of Short-Term Neuronal Plasticity and Synaptic Plasticity Revealed by Nonlinear Systems Analysis in Dentate Granule Cells.
EMBC
Xiaping Xie, Dong Song, Zhuo Wang, Vasilis Z. Marmarelis, Theodore W. Berger
2006 — conf
Modeling Hippocampal Nonlinear Dynamic Transformations with Principal Dynamic Modes.
EMBC
Spiros H. Courellis, Theodoros P. Zanos, Min-Chi Hsiao, Robert E. Hampson, Sam A. Deadwyler, Vasilis Z. Marmarelis, Theodore W. Berger
2006 — conf
Modeling the Nonlinear Dynamic Interactions of the Lateral and the Medial Perforant Path of the Hippocampal Dentate Gyrus.
EMBC
Angelika Dimoka, Spiros H. Courellis, Vasilis Z. Marmarelis, Theodore W. Berger
2006 — conf
Physiologically Plausible Stochastic Nonlinear Kernel Models of Spike Train to Spike Train Transformation.
EMBC
Dong Song, Rosa H. M. Chan, Vasilis Z. Marmarelis, Robert E. Hampson, Sam A. Deadwyler, Theodore W. Berger
2006 J jnl
Segmentation methodology for automated classification and differentiation of soft tissues in multiband images of high-resolution ultrasonic transmission tomography.
IEEE Trans. Medical Imaging
Jeong-Won Jeong, Dae C. Shin, Synho Do, Vasilis Z. Marmarelis
2006 — conf
VLSI Implementation of a Nonlinear Neuronal Model: A "Neural Prosthesis" to Restore Hippocampal Trisynaptic Dynamics.
EMBC
Min-Chi Hsiao, Chiu-Hsien Chan, Vijay Srinivasan, Ashish Ahuja, Gopal Erinjippurath, Theodoros P. Zanos, Ghassan I. Gholmieh, Dong Song, Jack Wills, Jeff LaCoss, Spiros H. Courellis, Armand R. Tanguay, John J. Granacki, Vasilis Z. Marmarelis, Theodore W. Berger
2005 J jnl
Detecting CA1 short-term plasticity variations associated with changes in stimulus intensity and extracellular medium composition.
Neurocomputing
Ghassan I. Gholmieh, Spiros H. Courellis, Vasilis Z. Marmarelis, Theodore W. Berger
2005 B conf
Implantable biomimetic electronics as neural prostheses for lost cognitive function.
IJCNN
Theodore W. Berger, John J. Granacki, Vasilis Z. Marmarelis, Armand R. Tanguay Jr., Sam A. Deadwyler, Greg A. Gerhardt
2005 J jnl
Soft tissue differentiation using multiband signatures of high resolution ultrasonic transmission tomography.
IEEE Trans. Medical Imaging
Jeong-Won Jeong, Tae-Seong Kim, Dae C. Shin, Synho Do, Manbir Singh, Vasilis Z. Marmarelis
2004 — conf
3-D High Resolution Images of Ultrasonic Transmission Tomography Compared To Magnetic Resonance And Optical Images.
ISBI
Jeong-Won Jeong, Dae C. Shin, Tae-Seong Kim, Chengzheng Huang, Synho Do, Manbir Singh, Vasilis Z. Marmarelis
2004 B conf
Modeling nonlinear neural dynamics with Volterra-Poisson kernels.
IJCNN
Spiros H. Courellis, Ghassan I. Gholmieh, Vasilis Z. Marmarelis, Theodore W. Berger
2004 J jnl
Nonlinear modeling of the dynamic effects of arterial pressure and CO
IEEE Trans. Biomed. Eng.
Georgios D. Mitsis, Marc J. Poulin, Peter A. Robbins, Vasilis Z. Marmarelis
2004 — conf
Volterra-Type Nonlinear Image Restoration of Medical Imagery Using Principal Dynamic Modes.
ISBI
Synho Do, Vasilis Z. Marmarelis, Dae C. Shin, Jeong-Won Jeong, Tae-Seong Kim
2001 J jnl
Brain-implantable biomimetic electronics as the next era in neural prosthetics.
Proc. IEEE
Theodore W. Berger, Michel Baudry, Roberta Diaz Brinton, Jim-Shih Liaw, Vasilis Z. Marmarelis, Alex Yoondong Park, Bing J. Sheu, Armand R. Tanguay
2000 J jnl
A novel network for nonlinear modeling of neural systems with arbitrary point-process inputs.
Neural Networks
Konstantinos Alataris, Theodore W. Berger, Vasilis Z. Marmarelis
2000 J jnl
Laser induced fluorescence attenuation spectroscopy: detection of hypoxia.
IEEE Trans. Biomed. Eng.
Ramez E. N. Shehada, Vasilis Z. Marmarelis, Hebah N. Mansour, Warren S. Grundfest
1999 J jnl
Decomposition of neural systems with nonlinear feedback using stimulus-response data.
Neurocomputing
Martin T. Chian, Vasilis Z. Marmarelis, Theodore W. Berger
1999 J jnl
Modeling of nonlinear nonstationary dynamic systems with a novel class of artificial neural networks.
IEEE Trans. Neural Networks
M. Iatrou, Theodore W. Berger, Vasilis Z. Marmarelis
1998 J jnl
Comparative nonlinear modeling of renal autoregulation in rats: Volterra approach versus artificial neural networks.
IEEE Trans. Neural Networks
Ki H. Chon, Niels-Henrik Holstein-Rathlou, Donald J. Marsh, Vasilis Z. Marmarelis
1998 J jnl
Nonlinear system analysis of renal autoregulation in normotensive and hypertensive rats.
IEEE Trans. Biomed. Eng.
Ki H. Chon, Yu-Ming Chen, Niels-Henrik Holstein-Rathlou, Vasilis Z. Marmarelis
1997 J jnl
On the relation between continuous and discrete nonlinear parametric models.
Autom.
Xiao Zhao, Vasilis Z. Marmarelis
1997 J jnl
Volterra models and three-layer perceptrons.
IEEE Trans. Neural Networks
Vasilis Z. Marmarelis, Xiao Zhao
1995 J jnl
Nonlinear neuronal mode analysis of action potential encoding in the cockroach tactile spine neuron.
Biol. Cybern.
Andrew S. French, Vasilis Z. Marmarelis
1994 — conf
Kernel invariance method for relating continuous-time with discrete-time nonlinear parametric models.
ICASSP (3)
Xiao Zhao, Vasilis Z. Marmarelis
1993 J jnl
Modeling of neural systems by use of neuronal modes.
IEEE Trans. Biomed. Eng.
Vasilis Z. Marmarelis, Melissa Orme
1993 J jnl
On the efficacy of linear system analysis of renal autoregulation in rats.
IEEE Trans. Biomed. Eng.
Ki Y. Chon, Yu-Ming Chen, Niels-Henrik Holstein-Rathlou, Donald J. Marsh, Vasilis Z. Marmarelis
1990 B conf
An artificial neural network for motion detection and speed estimation.
IJCNN
Spiros H. Courellis, Vasilis Z. Marmarelis
1989 J jnl
Signal transformation and coding in neural systems.
IEEE Trans. Biomed. Eng.
Vasilis Z. Marmarelis
1988 J jnl
Identification of linear periodically time-varying systems using white-noise test inputs.
Autom.
A. D. Sams, Vasilis Z. Marmarelis
1988 J jnl
Modeling of task-dependent characteristics of human operator dynamics pursuit manual tracking.
IEEE Trans. Syst. Man Cybern.
Aiman Abdel-Malek, Vasilis Z. Marmarelis
1983 J jnl
Practical estimation of correlation functions of nonstationary Gaussian processes.
IEEE Trans. Inf. Theory
Vasilis Z. Marmarelis
1983 J jnl
Processing of visual information in the distal neurons of the vertebrate retina.
IEEE Trans. Syst. Man Cybern.
John C. Curlander, Vasilis Z. Marmarelis
1979 J jnl
Error analysis and optimal estimation procedures in identification of nonlinear volterra systems.
Autom.
Vasilis Z. Marmarelis