Vanessa López-Marrero

12 papers Journal 9Unranked 3
YearRankTypeTitle / Venue / Authors
2025 J jnl
Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.
J. Comput. Biol.
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Shinjae Yoo, Shantenu Jha
2024 J jnl
Density estimation via measure transport: Outlook for applications in the biological sciences.
Stat. Anal. Data Min.
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2024 — conf
Fourier neural operators for spatiotemporal dynamics in two-dimensional turbulence.
SC Workshops
Mohammad Atif, Pulkit Dubey, Pratik P. Aghor, Vanessa López-Marrero, Tao Zhang, Abdullah Sharfuddin, Kwangmin Yu, Fan Yang, Foluso Ladeinde, Yangang Liu, Meifeng Lin, Lingda Li
2024 J jnl
Fourier neural operators for spatiotemporal dynamics in two-dimensional turbulence.
CoRR
Mohammad Atif, Pulkit Dubey, Pratik P. Aghor, Vanessa López-Marrero, Tao Zhang, Abdullah Sharfuddin, Kwangmin Yu, Fan Yang, Foluso Ladeinde, Yangang Liu, Meifeng Lin, Lingda Li
2024 J jnl
Multi-Function Multi-Way Analog Technology for Sustainable Machine Intelligence Computation.
CoRR
Vassilis Kalantzis, Mark S. Squillante, Shashanka Ubaru, Tayfun Gokmen, Chai Wah Wu, Anshul Gupta, Haim Avron, Tomasz Nowicki, Malte J. Rasch, O. Murat Onen, Vanessa López-Marrero, Effendi Leobandung, Yasuteru Kohda, Wilfried Haensch, Lior Horesh
2024 J jnl
Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.
Frontiers Bioinform.
Xihaier Luo, Seyednami Niyakan, Patrick R. Johnstone, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Shantenu Jha, Byung-Jun Yoon
2024 J jnl
Towards accelerating particle-resolved direct numerical simulation with neural operators.
Stat. Anal. Data Min.
Mohammad Atif, Vanessa López-Marrero, Tao Zhang, Abdullah Sharfuddin, Kwangmin Yu, Jiaqi Yang, Fan Yang, Foluso Ladeinde, Yangang Liu, Meifeng Lin, Lingda Li
2023 — conf
Automated Extraction of Molecular Interactions and Pathway Knowledge using Large Language Model, Galactica: Opportunities and Challenges.
BioNLP@ACL
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.
CoRR
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Comprehensive analysis of gene expression profiles to radiation exposure reveals molecular signatures of low-dose radiation response.
CoRR
Xihaier Luo, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Byung-Jun Yoon
2023 J jnl
Density Estimation via Measure Transport: Outlook for Applications in the Biological Sciences.
CoRR
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2022 — conf
Comprehensive analysis of gene expression profiles to radiation exposure reveals molecular signatures of low-dose radiation response.
BIBM
Xihaier Luo, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Byung-Jun Yoon