Vamsi Kundeti

27 papers B 2C 2Misc 1Journal 16Unranked 6
YearRankTypeTitle / Venue / Authors
2014 J jnl
Border Length Minimization Problem on a Square Array.
J. Comput. Biol.
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2012 J jnl
An Efficient Algorithm for Chinese Postman Walk on Bi-Directed de Bruijn Graphs.
Discret. Math. Algorithms Appl.
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2012 J jnl
Self assembly of rectangular shapes on concentration programming and probabilistic tile assembly models.
Nat. Comput.
Vamsi Kundeti, Sanguthevar Rajasekaran
2011 J jnl
Efficient algorithms for self assembling non-rectangular nano structures.
Nat. Comput.
Vamsi Kundeti, Sanguthevar Rajasekaran
2011 J jnl
Efficient out-of-core sorting algorithms for the Parallel Disks Model.
J. Parallel Distributed Comput.
Vamsi Kundeti, Sanguthevar Rajasekaran
2011 J jnl
PMS5: an efficient exact algorithm for the (l, d)-motif finding problem.
BMC Bioinform.
Hieu Dinh, Sanguthevar Rajasekaran, Vamsi Kundeti
2011 — conf
Workshop: Efficient sequential and parallel algorithms for sequence assembly.
ICCABS
Sanguthevar Rajasekaran, Hieu Dinh, Vamsi Kundeti
2010 J jnl
An Efficient Algorithm For Chinese Postman Walk on Bi-directed de Bruijn Graphs
CoRR
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2010 — conf
An Efficient Algorithm for Chinese Postman Walk on Bi-directed de Bruijn Graphs.
COCOA (1)
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2010 J jnl
Efficient Parallel and Out of Core Algorithms for Constructing Large Bi-directed de Bruijn Graphs
CoRR
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2010 J jnl
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs.
BMC Bioinform.
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh, Matthew Vaughn, Vishal Thapar
2010 J jnl
Fast algorithms for placing large entries along the diagonal of a sparse matrix.
J. Comput. Appl. Math.
Vamsi Kundeti, Sanguthevar Rajasekaran
2010 J jnl
MimoSA: a system for minimotif annotation.
BMC Bioinform.
Jay Vyas, Ronald J. Nowling, Thomas Meusburger, David P. Sargeant, Krishna Kadaveru, Michael R. Gryk, Vamsi Kundeti, Sanguthevar Rajasekaran, Martin R. Schiller
2010 J jnl
On the Border Length Minimization Problem (BLMP) on a Square Array
CoRR
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2010 J jnl
On the Hardness of the Border Length Minimization Problem on a Rectangular Array.
Int. J. Found. Comput. Sci.
Vamsi Kundeti, Sanguthevar Rajasekaran
2010 — conf
On the border length minimization problem (BLMP) on a square array.
BCB
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh
2010 B conf
Randomized Self Assembly of Rectangular Nano Structures.
DNA
Vamsi Kundeti, Sanguthevar Rajasekaran
2009 J jnl
A Simplified Proof For The Application Of Freivalds' Technique to Verify Matrix Multiplication
CoRR
Vamsi Kundeti
2009 — conf
Efficient Algorithms for Self Assembling Triangular and Other Nano Structures.
ISBRA
Vamsi Kundeti, Sanguthevar Rajasekaran
2009 B conf
Generalized algorithms for generating balanced modulation codes in protein-based volumetric memories.
IEEE Congress on Evolutionary Computation
Vamsi Kundeti, Sanguthevar Rajasekaran, Robert Birge
2009 J jnl
Minimotif miner 2nd release: a database and web system for motif search.
Nucleic Acids Res.
Sanguthevar Rajasekaran, Sudha Balla, Patrick Gradie, Michael R. Gryk, Krishna Kadaveru, Vamsi Kundeti, Mark W. Maciejewski, Tian Mi, Nicholas Rubino, Jay Vyas, Martin R. Schiller
2009 C conf
On the Hardness of the Border Length Minimization Problem.
BIBE
Vamsi Kundeti, Sanguthevar Rajasekaran
2009 J jnl
Spectrum Based Techniques for Graph Isomorphism.
Int. J. Found. Comput. Sci.
Sanguthevar Rajasekaran, Vamsi Kundeti
2008 C conf
A local structural alignment algorithm with Variable Length Alignment Fragment Pairs.
BIBE
Vamsi Kundeti, Sanguthevar Rajasekaran
2008 — conf
An efficient digital circuit for implementing Sequence Alignment algorithm in an extended processor.
ASAP
Vamsi Kundeti, Yunsi Fei, Sanguthevar Rajasekaran
2008 Misc conf
Efficient PDM Sorting Algorithms.
HiPC
Vamsi Kundeti, Sanguthevar Rajasekaran
2008 — conf
Extending the Four Russian Algorithm to Compute the Edit Script in Linear Space.
ICCS (1)
Vamsi Kundeti, Sanguthevar Rajasekaran