V. G. Vinod Vydiswaran

71 papers A* 3A 4Misc 8Journal 22Unranked 32
YearRankTypeTitle / Venue / Authors
2025 conf
MedInfo
Peijin Han, Guanghao Zhang, V. G. Vinod Vydiswaran
2025 conf
CLEF (Working Notes)
Aisha Benloucif, Yashasvini Nannapuraju, Sripriya Bellam, Yuyan Hu, Zhe Zhao, V. G. Vinod Vydiswaran
2024 conf
NAACL-HLT
Jiazhao Li, Yijin Yang, Zhuofeng Wu, V. G. Vinod Vydiswaran, Chaowei Xiao
2024 conf
EMNLP (Findings)
Zhuofeng Wu, Richard He Bai, Aonan Zhang, Jiatao Gu, V. G. Vinod Vydiswaran, Navdeep Jaitly, Yizhe Zhang
2024 J jnl
CoRR
Zhuofeng Wu, He Bai, Aonan Zhang, Jiatao Gu, V. G. Vinod Vydiswaran, Navdeep Jaitly, Yizhe Zhang
2023 J jnl
Database J. Biol. Databases Curation
Davy Weissenbacher, Karen O'Connor, Siddharth Rawal, Yu Zhang, Richard Tzong-Han Tsai, Timothy Miller, Dongfang Xu, Carol Anderson, Bo Liu, Qing Han, Jinfeng Zhang, Igor Kulev, Berkay Köprü, Raul Rodriguez-Esteban, Elif Ozkirimli, Ammer Ayach, Roland Roller, Stephen R. Piccolo, Peijin Han, V. G. Vinod Vydiswaran, Ramya Tekumalla, Juan M. Banda, Parsa Bagherzadeh, Sabine Bergler, João Figueira Silva, Tiago Melo Almeida, Paloma Martínez, Renzo M. Rivera Zavala, Chen-Kai Wang, Hong-Jie Dai, Luis Alberto Robles Hernandez, Graciela Gonzalez-Hernandez
2023 J jnl
CoRR
Jiazhao Li, Yijin Yang, Zhuofeng Wu, V. G. Vinod Vydiswaran, Chaowei Xiao
2023 conf
ACL (Findings)
Jiazhao Li, Zhuofeng Wu, Wei Ping, Chaowei Xiao, V. G. Vinod Vydiswaran
2023 J jnl
CoRR
Jiazhao Li, Zhuofeng Wu, Wei Ping, Chaowei Xiao, V. G. Vinod Vydiswaran
2023 J jnl
J. Am. Medical Informatics Assoc.
Anne M. Walling, Joshua M. Pevnick, Antonia V. Bennett, V. G. Vinod Vydiswaran, Christine S. Ritchie
2023 conf
EMNLP (Findings)
Zhuofeng Wu, Chaowei Xiao, V. G. Vinod Vydiswaran
2023 J jnl
CoRR
Zhuofeng Wu, Chaowei Xiao, V. G. Vinod Vydiswaran
2023 conf
BioNLP@ACL
Quancheng Liu, Xiheng Ren, V. G. Vinod Vydiswaran
2023 conf
CLEF (Working Notes)
Chi-Yun Chang, Jiaqi Li, Shivangi Kumar, V. G. Vinod Vydiswaran
2022 conf
COMAD/CODS
V. G. Vinod Vydiswaran, Xinyan Zhao, Deahan Yu
2022 conf
NAACL-HLT
Zhuofeng Wu, Sinong Wang, Jiatao Gu, Rui Hou, Yuxiao Dong, V. G. Vinod Vydiswaran, Hao Ma
2022 J jnl
CoRR
Zhuofeng Wu, Sinong Wang, Jiatao Gu, Rui Hou, Yuxiao Dong, V. G. Vinod Vydiswaran, Hao Ma
2022 J jnl
CoRR
Jiazhao Li, Corey A. Lester, Xinyan Zhao, Yuting Ding, Yun Jiang, V. G. Vinod Vydiswaran
2022 Misc conf
AMIA
David A. Dorr, Nicole Gray Weiskopf, Michelle Bobo, MJ Dunne, Peijan Han, Jessica Kim, V. G. Vinod Vydiswaran
2021 conf
COMAD/CODS
V. G. Vinod Vydiswaran, Xinyan Zhao, Deahan Yu
2021 A* conf
AAAI
Xinyan Zhao, V. G. Vinod Vydiswaran
2020 conf
SMM4H@COLING
V. G. Vinod Vydiswaran, Deahan Yu, Xinyan Zhao, Ermioni Carr, Jonathan Martindale, Jingcheng Xiao, Noha Ghannam, Matteo Althoen, Alexis Castellanos, Neel Patel, Daniel Vasquez
2020 J jnl
CoRR
Xinyan Zhao, V. G. Vinod Vydiswaran
2020 conf
EMNLP (Findings)
Jiazhao Li, Corey A. Lester, Xinyan Zhao, Yuting Ding, Yun Jiang, V. G. Vinod Vydiswaran
2020 conf
ICHI
Jiazhao Li, Adharsh Murali, Qiaozhu Mei, V. G. Vinod Vydiswaran
2020 J jnl
J. Am. Medical Informatics Assoc.
V. G. Vinod Vydiswaran, Daniel M. Romero, Xinyan Zhao, Deahan Yu, Iris N. Gomez-Lopez, Jin Xiu Lu, Bradley E. Iott, Ana Baylin, Erica C. Jansen, Philippa Clarke, Veronica J. Berrocal, Robert Goodspeed, Tiffany C. Veinot
2019 J jnl
BMC Medical Informatics Decis. Mak.
David A. Hanauer, Qiaozhu Mei, V. G. Vinod Vydiswaran, Karandeep Singh, Zach Landis-Lewis, Chunhua Weng
2019 J jnl
J. Am. Medical Informatics Assoc.
V. G. Vinod Vydiswaran, Asher Strayhorn, Xinyan Zhao, Phil Robinson, Mahesh Agarwal, Erin Bagazinski, Madia Essiet, Bradley E. Iott, Hyeon Joo, PingJui Ko, Dahee Lee, Jin Xiu Lu, Jinghui Liu, Adharsh Murali, Koki Sasagawa, Tianshi Wang, Nalingna Yuan
2019 conf
SMM4H@ACL
Xinyan Zhao, Deahan Yu, V. G. Vinod Vydiswaran
2019 J jnl
BMC Medical Informatics Decis. Mak.
V. G. Vinod Vydiswaran, Manoj Reddy
2019 J jnl
BMC Medical Informatics Decis. Mak.
V. G. Vinod Vydiswaran, Yaoyun Zhang, Yanshan Wang, Hua Xu
2019 conf
SMM4H@ACL
V. G. Vinod Vydiswaran, Grace Ganzel, Bryan Romas, Deahan Yu, Amy Austin, Neha Bhomia, Socheatha Chan, Stephanie Hall, Van Le, Aaron Miller, Olawunmi Oduyebo, Aulia Song, Radhika Sondhi, Danny Teng, Hao Tseng, Kim Vuong, Stephanie Zimmerman
2018 A conf
ICWSM
V. G. Vinod Vydiswaran, Daniel M. Romero, Xinyan Zhao, Deahan Yu, Iris N. Gomez-Lopez, Jin Xiu Lu, Bradley E. Iott, Ana Baylin, Philippa Clarke, Veronica J. Berrocal, Robert Goodspeed, Tiffany C. Veinot
2018 Misc conf
AMIA
Yun Jiang, V. G. Vinod Vydiswaran, Eun-Young Lee, Hyeon Joo, Anna Zheng, Marcelline R. Harris
2018 conf
ICHI Workshops
David A. Hanauer, Qiaozhu Mei, V. G. Vinod Vydiswaran, Karandeep Singh, Zach Landis-Lewis, Chunhua Weng
2018 conf
TREC
Jinghui Liu, Clair A. Kronk, Wu-Chen Su, Danny T. Y. Wu, V. G. Vinod Vydiswaran
2018 Misc conf
AMIA
Andy Jinseok Lee, Sunyang Fu, V. G. Vinod Vydiswaran
2018 conf
ICHI Workshops
Manoj Reddy, V. G. Vinod Vydiswaran
2018 J jnl
J. Biomed. Informatics
Jean Hardy, Tiffany C. Veinot, Xiang Yan, Veronica J. Berrocal, Philippa Clarke, Robert Goodspeed, Iris N. Gomez-Lopez, Daniel M. Romero, V. G. Vinod Vydiswaran
2017 conf
ICHI
Alexander Kinsora, Kate Barron, Qiaozhu Mei, V. G. Vinod Vydiswaran
2017 J jnl
J. Biomed. Informatics
David A. Hanauer, Danny T. Y. Wu, Lei Yang, Qiaozhu Mei, Katherine B. Murkowski-Steffy, V. G. Vinod Vydiswaran, Kai Zheng
2017 Misc conf
AMIA
Xinyan Zhao, V. G. Vinod Vydiswaran
2017 conf
IJCNLP(1)
Shibamouli Lahiri, V. G. Vinod Vydiswaran, Rada Mihalcea
2017 Misc conf
AMIA
Yue Wang, Jian Tang, V. G. Vinod Vydiswaran, Kai Zheng, Hua Xu, Qiaozhu Mei
2017 conf
TREC
Tong Yin, Danny T. Y. Wu, V. G. Vinod Vydiswaran
2016 conf
ICHI
Jian Huang, Keyang Xu, V. G. Vinod Vydiswaran
2016 J jnl
J. Am. Medical Informatics Assoc.
Danny T. Y. Wu, David A. Hanauer, Qiaozhu Mei, Patricia M. Clark, Lawrence C. An, Joshua Proulx, Qing T. Zeng, V. G. Vinod Vydiswaran, Kevyn Collins-Thompson, Kai Zheng
2016 ed.
TextGraphs@NAACL-HLT
Tanmoy Chakraborty, Martin Riedl, V. G. Vinod Vydiswaran
2016 J jnl
CoRR
V. S. Subrahmanian, Amos Azaria, Skylar Durst, Vadim Kagan, Aram Galstyan, Kristina Lerman, Linhong Zhu, Emilio Ferrara, Alessandro Flammini, Filippo Menczer, Rand Waltzman, Andrew Stevens, Alexander Dekhtyar, Shuyang Gao, Tad Hogg, Farshad Kooti, Yan Liu, Onur Varol, Prashant Shiralkar, V. G. Vinod Vydiswaran, Qiaozhu Mei, Tim Huang
2015 J jnl
J. Biomed. Informatics
Kai Zheng, V. G. Vinod Vydiswaran, Yang Liu, Yue Wang, Amber Stubbs, Özlem Uzuner, Anupama E. Gururaj, Samuel Bayer, John S. Aberdeen, Anna Rumshisky, Serguei Pakhomov, Hongfang Liu, Hua Xu
2015 Misc conf
AMIA
Tera L. Reynolds, V. G. Vinod Vydiswaran, Yuting Wu, Qiaozhu Mei, David A. Hanauer, Kai Zheng
2015 conf
TREC
Fengmin Hu, Danny T. Y. Wu, Qiaozhu Mei, V. G. Vinod Vydiswaran
2015 J jnl
J. Assoc. Inf. Sci. Technol.
V. G. Vinod Vydiswaran, ChengXiang Zhai, Dan Roth, Peter Pirolli
2014 Misc conf
AMIA
V. G. Vinod Vydiswaran, Qiaozhu Mei, David A. Hanauer, Kai Zheng
2014 ed.
TextGraphs@EMNLP
V. G. Vinod Vydiswaran, Amarnag Subramanya, Gabor Melli, Irina Matveeva
2014 A conf
ICWSM
V. G. Vinod Vydiswaran, Yang Liu, Kai Zheng, David A. Hanauer, Qiaozhu Mei
2012 A conf
CIKM
V. G. Vinod Vydiswaran, ChengXiang Zhai, Dan Roth, Peter Pirolli
2012 A conf
ECIR
Parikshit Sondhi, V. G. Vinod Vydiswaran, ChengXiang Zhai
2012 conf
ASIST
V. G. Vinod Vydiswaran, ChengXiang Zhai, Dan Roth, Peter Pirolli
2011 A* conf
KDD
V. G. Vinod Vydiswaran, ChengXiang Zhai, Dan Roth
2011 conf
ASIST
V. G. Vinod Vydiswaran, Jeroen van den Eijkhof, Raman Chandrasekar, Ann Paradiso, Jim St. George
2010 A* conf
ACL
Mark Sammons, V. G. Vinod Vydiswaran, Dan Roth
2010 conf
NAACL (Tutorial Abstracts)
Mark Sammons, Idan Szpektor, V. G. Vinod Vydiswaran
2009 conf
ACL/IJCNLP (2)
Dan Roth, Mark Sammons, V. G. Vinod Vydiswaran
2009 conf
TREC
Yuanhua Lv, Jing He, V. G. Vinod Vydiswaran, Kavita Ganesan, ChengXiang Zhai
2009 conf
TREC
V. G. Vinod Vydiswaran, Kavita Ganesan, Yuanhua Lv, Jing He, ChengXiang Zhai
2009 conf
TAC
Mark Sammons, V. G. Vinod Vydiswaran, Tim Vieira, Nikhil Johri, Ming-Wei Chang, Dan Goldwasser, Vivek Srikumar, Gourab Kundu, Yuancheng Tu, Kevin Small, Joshua S. Rule, Quang Do, Dan Roth
2008 conf
TAC
Hyun Duk Kim, Dae Hoon Park, V. G. Vinod Vydiswaran, ChengXiang Zhai
2005 Misc conf
COMAD
V. G. Vinod Vydiswaran, Sunita Sarawagi
2004 J jnl
SIGKDD Explor.
Sunita Sarawagi, V. G. Vinod Vydiswaran
2003 J jnl
SIGKDD Explor.
Sunita Sarawagi, V. G. Vinod Vydiswaran, Sumana Srinivasan, Kapil Bhudhia
redb/extractors/js_extractors/js_xray.py
← Index redb/extractors/js_extractors/js_xray.py python
"""Subprocess wrapper for the bundled js-x-ray Node bridge.

Mirrors `js_deobfuscator.py`: shell out to a Node script with a per-sample
timeout, kill the process group on hang, demote `FileNotFoundError` to debug
(missing tool is routine — the host either has Node + the bundled package
installed or it doesn't), and return a structured result on success.

The bridge lives at `redb/extractors/js_extractors/scripts/js-xray-runner.js`.
Operators install the JS dependency once with `npm install` in that directory
(or override the path with `JS_XRAY_RUNNER_PATH`).

Configuration (env vars):
    JS_XRAY_RUNNER_PATH   Path to the Node bridge script (default: bundled).
    JS_XRAY_TIMEOUT       Seconds before the subprocess is killed. Default: 30.

`run(source, log)` returns `XRayResult(obfuscator, warnings)` on a successful
analysis, or `XRayResult(None, [])` for any non-success path (binary missing,
timeout, parse failure, etc.). The two unsuccessful states are
indistinguishable to the caller on purpose — they all collapse to "no
js-x-ray verdict, fall back to heuristic".
"""

from __future__ import annotations

import json
import os
import signal
import subprocess
import tempfile
from dataclasses import dataclass, field
from typing import List, Optional

# Bundled bridge: redb/extractors/js_extractors/scripts/js-xray-runner.js
_DEFAULT_RUNNER = os.path.join(
    os.path.dirname(__file__), "scripts", "js-xray-runner.js"
)
_DEFAULT_NODE = "node"
_DEFAULT_TIMEOUT_SECS = 30


@dataclass
class XRayResult:
    """Parsed js-x-ray output. `obfuscator` is the recognised family name
    (e.g. "jsfuck", "obfuscator.io") or None when js-x-ray did not flag the
    code. `warnings` carries every {kind, value} pair the analyser produced;
    the heuristic uses it as a corroborating signal. `avg_identifier_length`
    is js-x-ray's own AST-derived figure — used as a fallback for the
    heuristic's `avg_identifier_length<2` strong signal when pyjsparser
    can't parse the source (anything ES2015+ trips it)."""

    obfuscator: Optional[str] = None
    warnings: List[dict] = field(default_factory=list)
    avg_identifier_length: Optional[float] = None

    @property
    def flagged(self) -> bool:
        return self.obfuscator is not None


def _empty() -> XRayResult:
    return XRayResult(obfuscator=None, warnings=[])


def run(source: str, log) -> XRayResult:
    if not source:
        return _empty()

    runner = os.getenv("JS_XRAY_RUNNER_PATH", _DEFAULT_RUNNER)
    node_bin = os.getenv("JS_XRAY_NODE_BIN", _DEFAULT_NODE)
    timeout = int(os.getenv("JS_XRAY_TIMEOUT", str(_DEFAULT_TIMEOUT_SECS)))

    if not os.path.exists(runner):
        log.debug(f"js-x-ray runner not found at {runner}")
        return _empty()

    # Skip the subprocess entirely when the JS dependency isn't installed.
    # Without this, every call to a host that has `node` but never ran
    # `npm install` next to the runner would still fork node, get a require
    # error, and exit nonzero — wasted ~50–200ms per JS sample (and per test).
    runner_dir = os.path.dirname(runner)
    if not os.path.isdir(os.path.join(runner_dir, "node_modules", "@nodesecure", "js-x-ray")):
        log.debug(f"@nodesecure/js-x-ray not installed in {runner_dir}")
        return _empty()

    tmp_path = None
    try:
        with tempfile.NamedTemporaryFile(
            suffix=".js", mode="w", delete=False, encoding="utf-8"
        ) as tmp:
            tmp.write(source)
            tmp_path = tmp.name

        try:
            process = subprocess.Popen(
                [node_bin, runner, tmp_path],
                stdout=subprocess.PIPE,
                stderr=subprocess.PIPE,
                preexec_fn=os.setsid,
            )
            try:
                stdout, stderr = process.communicate(timeout=timeout)
            except subprocess.TimeoutExpired:
                # Kill the whole process group so any node helpers die too.
                try:
                    os.killpg(os.getpgid(process.pid), signal.SIGTERM)
                    process.wait(timeout=5)
                except Exception:
                    try:
                        os.killpg(os.getpgid(process.pid), signal.SIGKILL)
                    except Exception:
                        pass
                log.warning(f"js-x-ray timed out after {timeout}s")
                return _empty()

            if process.returncode != 0:
                err = stderr.decode("utf-8", errors="replace").strip()
                log.debug(f"js-x-ray exited {process.returncode}: {err}")
                return _empty()

            text = stdout.decode("utf-8", errors="replace").strip()
            if not text:
                return _empty()

            try:
                payload = json.loads(text)
            except json.JSONDecodeError as e:
                log.warning(f"js-x-ray emitted non-JSON output: {e}")
                return _empty()

            obfuscator = payload.get("obfuscator")
            warnings = payload.get("warnings") or []
            if not isinstance(warnings, list):
                warnings = []

            ids_avg = payload.get("idsLengthAvg")
            if not isinstance(ids_avg, (int, float)):
                ids_avg = None

            return XRayResult(
                obfuscator=obfuscator,
                warnings=warnings,
                avg_identifier_length=ids_avg,
            )
        finally:
            if tmp_path:
                try:
                    os.unlink(tmp_path)
                except Exception:
                    pass
    except FileNotFoundError:
        log.debug(f"node binary not found at {node_bin}")
        return _empty()
    except Exception as e:
        log.error(f"js-x-ray subprocess error: {e}")
        return _empty()