Ursula Klingmüller

14 papers Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2017 J jnl
Correlated receptor transport processes buffer single-cell heterogeneity.
PLoS Comput. Biol.
Stefan M. Kallenberger, Anne L. Unger, Stefan Legewie, Konstantinos Lymperopoulos, Ursula Klingmüller, Roland Eils, Dirk-Peter Herten
2017 J jnl
TTCA: an R package for the identification of differentially expressed genes in time course microarray data.
BMC Bioinform.
Marco Albrecht, Damian Stichel, Benedikt Müller, Ruth Merkle, Carsten Sticht, Norbert Gretz, Ursula Klingmüller, Kai Breuhahn, Franziska Matthäus
2016 J jnl
Identification of Cell Type-Specific Differences in Erythropoietin Receptor Signaling in Primary Erythroid and Lung Cancer Cells.
PLoS Comput. Biol.
Ruth Merkle, Bernhard Steiert, Florian Salopiata, Sofia Depner, Andreas Raue, Nao Iwamoto, Max Schelker, Helge Hass, Marvin Wäsch, Martin E. Böhm, Oliver Mücke, Daniel B. Lipka, Christoph Plass, Wolf D. Lehmann, Clemens Kreutz, Jens Timmer, Marcel Schilling, Ursula Klingmüller
2015 J jnl
Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
Bioinform.
Andreas Raue, Bernhard Steiert, Max Schelker, Clemens Kreutz, Tim Maiwald, Helge Hass, Joep Vanlier, Christian Tönsing, Lorenz Adlung, Raphael Engesser, Wolfgang Mader, Tim Heinemann, Jan Hasenauer, Marcel Schilling, Thomas Höfer, Edda Klipp, Fabian J. Theis, Ursula Klingmüller, Birgit Schoeberl, Jens Timmer
2015 J jnl
Disentangling the Complexity of HGF Signaling by Combining Qualitative and Quantitative Modeling.
PLoS Comput. Biol.
Lorenza Alice D'Alessandro, Regina Samaga, Tim Maiwald, Seong-Hwan Rho, Sandra Bonefas, Andreas Raue, Nao Iwamoto, Alexandra Kienast, Katharina Waldow, Rene Meyer, Marcel Schilling, Jens Timmer, Steffen Klamt, Ursula Klingmüller
2013 J jnl
Excemplify: A Flexible Template Based Solution, Parsing and Managing Data in Spreadsheets for Experimentalists.
J. Integr. Bioinform.
Lei Shi, Lenneke Jong, Ulrike Wittig, Philippe Lucarelli, Markus Stepath, Stephanie Müller, Lorenza Alice D'Alessandro, Ursula Klingmüller, Wolfgang Müller
2012 J jnl
In silico labeling reveals the time-dependent label half-life and transit-time in dynamical systems.
BMC Syst. Biol.
Thomas Maiwald, Julie Blumberg, Andreas Raue, Stefan Hengl, Marcel Schilling, Sherwin K. B. Sy, Verena Becker, Ursula Klingmüller, Jens Timmer
2011 — conf
Quantification of frap experiments in live cell image sequences by combining segmentation and registration.
ISBI
Il-Han Kim, Catharina Cadmus, Andrea C. Pfeifer, Ursula Klingmüller, Roland Eils, Karl Rohr
2010 J jnl
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation.
BMC Bioinform.
Andreas Kowarsch, Florian Blöchl, Sebastian Bohl, Maria Saile, Norbert Gretz, Ursula Klingmüller, Fabian J. Theis
2010 J jnl
Model-based extension of high-throughput to high-content data.
BMC Syst. Biol.
Andrea C. Pfeifer, Daniel Kaschek, Julie Bachmann, Ursula Klingmüller, Jens Timmer
2009 J jnl
Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood.
Bioinform.
Andreas Raue, Clemens Kreutz, Thomas Maiwald, Julie Bachmann, Marcel Schilling, Ursula Klingmüller, Jens Timmer
2008 J jnl
A systems biology approach to analyse amplification in the JAK2-STAT5 signalling pathway.
BMC Syst. Biol.
Julio Vera, Julie Bachmann, Andrea C. Pfeifer, Verena Becker, Jose A. Hormiga, Néstor Torres Darias, Jens Timmer, Ursula Klingmüller, Olaf Wolkenhauer
2004 J jnl
Modeling the Nonlinear Dynamics of Cellular Signal Transduction.
Int. J. Bifurc. Chaos
Jens Timmer, T. G. Müller, I. Swameye, O. Sandra, Ursula Klingmüller
2003 J jnl
Simulation Methods for Optimal Experimental Design in Systems Biology.
Simul.
Daniel Faller, Ursula Klingmüller, Jens Timmer