Uri Hershberg

12 papers B 1Journal 9Unranked 2
YearRankTypeTitle / Venue / Authors
2017 J jnl
A spatially heterogeneous Gillespie algorithm modeling framework that enables individual molecule history and tracking.
Eng. Appl. Artif. Intell.
Justin Melunis, Uri Hershberg
2017 J jnl
Detection of network communities with memory-biased random walk algorithms.
J. Complex Networks
Mesut Yucel, Lev Muchnik, Uri Hershberg
2017 J jnl
ImmuneDB: a system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data.
Bioinform.
Aaron M. Rosenfeld, Wenzhao Meng, Eline T. Luning Prak, Uri Hershberg
2017 — conf
MiGHT, a multi-level Gillespie hybrid tracked modeling framework which allows for cellular and environmental adaptivity.
SSCI
Justin Melunis, Uri Hershberg
2016 B conf
Efficient approximation of labeling problems with applications to immune repertoire analysis.
ICPR
Yusuf Osmanlioglu, Santiago Ontañón, Uri Hershberg, Ali Shokoufandeh
2016 J jnl
Using a novel clumpiness measure to unite data with metadata: Finding common sequence patterns in immune receptor germline V genes.
Pattern Recognit. Lett.
Gregory W. Schwartz, Ali Shokoufandeh, Santiago Ontañón, Uri Hershberg
2016 J jnl
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements.
BMC Bioinform.
Inimary T. Toby, Mikhail K. Levin, Edward Salinas, Scott Christley, Sanchita Bhattacharya, Felix Breden, Adam Buntzman, Brian Corrie, John M. Fonner, Namita T. Gupta, Uri Hershberg, Nishanth Marthandan, Aaron M. Rosenfeld, William Rounds, Florian Rubelt, Walter Scarborough, Jamie K. Scott, Mohamed Uduman, Jason A. Vander Heiden, Richard H. Scheuermann, Nancy Monson, Steven H. Kleinstein, Lindsay G. Cowell
2013 J jnl
Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection.
BMC Bioinform.
Elena Zaslavsky, German Nudelman, Susanna Marquez, Uri Hershberg, Boris M. Hartmann, Juilee Thakar, Stuart C. Sealfon, Steven H. Kleinstein
2011 J jnl
Detecting selection in immunoglobulin sequences.
Nucleic Acids Res.
Mohamed Uduman, Gur Yaari, Uri Hershberg, Jacob A. Stern, Mark J. Shlomchik, Steven H. Kleinstein
2005 — conf
Postext - A Mind for Society.
Adaptive Agents and Multi-Agent Systems
Avishalom Shalit, Tom Erez, Anna Deters, Uri Hershberg, Eran Shir, Sorin Solomon
2003 J jnl
Useful examples and a new model of the immune system.
Rev. d'Intelligence Artif.
Uri Hershberg
2001 J jnl
The immune system and other cognitive systems.
Complex.
Uri Hershberg, Sol Efroni