Ugur Dogrusöz

24 papers A 7B 1Journal 15Unranked 1
YearRankTypeTitle / Venue / Authors
2021 J jnl
RSTrace+: Reviewer suggestion using software artifact traceability graphs.
Inf. Softw. Technol.
Emre Sülün, Eray Tüzün, Ugur Dogrusöz
2019 — conf
Reviewer Recommendation using Software Artifact Traceability Graphs.
PROMISE
Emre Sülün, Eray Tüzün, Ugur Dogrusöz
2012 J jnl
Software support for SBGN maps: SBGN-ML and LibSBGN.
Bioinform.
Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber
2010 J jnl
ChiBE: interactive visualization and manipulation of BioPAX pathway models.
Bioinform.
Ozgun Babur, Ugur Dogrusöz, Emek Demir, Chris Sander
2009 J jnl
A layout algorithm for undirected compound graphs.
Inf. Sci.
Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir
2009 J jnl
Algorithms for effective querying of compound graph-based pathway databases.
BMC Bioinform.
Ugur Dogrusöz, Ahmet Cetintas, Emek Demir, Ozgun Babur
2008 A conf
Graph Drawing Contest Report.
GD
Ugur Dogrusöz, Christian A. Duncan, Carsten Gutwenger, Georg Sander
2007 J jnl
On labeling in graph visualization.
Inf. Sci.
Ugur Dogrusöz, Konstantinos G. Kakoulis, Brendan Madden, Ioannis G. Tollis
2006 J jnl
A layout algorithm for signaling pathways.
Inf. Sci.
Burkay Genç, Ugur Dogrusöz
2006 J jnl
A multi-graph approach to complexity management in interactive graph visualization.
Comput. Graph.
Ugur Dogrusöz, Burkay Genç
2006 J jnl
Patika
Bioinform.
Ugur Dogrusöz, E. Z. Erson, Erhan Giral, Emek Demir, Ozgun Babur, Ahmet Cetintas, R. Colak
2006 J jnl
Preface.
Theor. Comput. Sci.
Süleyman Cenk Sahinalp, Ugur Dogrusöz, S. Muthukrishnan
2004 A conf
A Compound Graph Layout Algorithm for Biological Pathways.
GD
Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir
2004 J jnl
An ontology for collaborative construction and analysis of cellular pathways.
Bioinform.
Emek Demir, Ozgun Babur, Ugur Dogrusöz, Attila Gürsoy, A. Ayaz, Gürcan Gülesir, Gurkan Nisanci, Rengül Çetin-Atalay
2004 B ed.
Combinatorial Pattern Matching, 15th Annual Symposium, CPM 2004, Istanbul,Turkey, July 5-7, 2004, Proceedings
CPM
Süleyman Cenk Sahinalp, S. Muthukrishnan, Ugur Dogrusöz
2003 A conf
A Constrained, Force-Directed Layout Algorithm for Biological Pathways.
GD
Burkay Genç, Ugur Dogrusöz
2002 A conf
A Framework for Complexity Management in Graph Visualization.
GD
Ugur Dogrusöz, Burkay Genç
2002 J jnl
Graph Visualization Toolkits.
IEEE Computer Graphics and Applications
Ugur Dogrusöz, Qing-Wen Feng, Brendan Madden, Michael Doorley, Arne Frick
2002 J jnl
PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways.
Bioinform.
Emek Demir, Ozgun Babur, Ugur Dogrusöz, Attila Gürsoy, Gurkan Nisanci, Rengül Çetin-Atalay, Mehmet Ozturk
2002 J jnl
Two-dimensional packing algorithms for layout of disconnected graphs.
Inf. Sci.
Ugur Dogrusöz
2001 A conf
Disconnected Graph Layout and the Polyomino Packing Approach.
GD
Karlis Freivalds, Ugur Dogrusöz, Paulis Kikusts
1998 A conf
Edge Labeling in the Graph Layout Toolkit.
GD
Ugur Dogrusöz, Konstantinos G. Kakoulis, Brendan Madden, Ioannis G. Tollis
1996 A conf
Circular Layout in the Graph Layout Toolkit.
GD
Ugur Dogrusöz, Brendan Madden, Patrick Madden
1996 J jnl
Enumerating all Cycles of a Planar Graph.
Parallel Algorithms Appl.
Ugur Dogrusöz, M. S. Krishnamoorthy