Tzu-Pin Lu

25 papers Journal 22Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
Ensemble-MIL: deep learning-based ensemble framework for biomarker prediction from histopathological images in colorectal cancer.
Biomed. Signal Process. Control.
Geng-Yun Tien, Yu-Chia Chen, Liang-Chuan Lai, Tzu-Pin Lu, Mong-Hsun Tsai, Eric Y. Chuang, Hsiang-Han Chen
2024 J jnl
Cross-population enhancement of PrediXcan predictions with a gnomAD-based east Asian reference framework.
Briefings Bioinform.
Han-Ching Chan, Amrita Chattopadhyay, Tzu-Pin Lu
2024 J jnl
Predicting drug response through tumor deconvolution by cancer cell lines.
Patterns
Yu-Ching Hsu, Yu-Chiao Chiu, Tzu-Pin Lu, Tzu-Hung Hsiao, Yidong Chen
2023 J jnl
Multi-ethnic Imputation System (MI-System): A genotype imputation server for high-dimensional data.
J. Biomed. Informatics
Amrita Chattopadhyay, Chien-Yueh Lee, Ying-Cheng Shen, Kuan-Chen Lu, Tzu-Hung Hsiao, Ching-Heng Lin, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2023 J jnl
Twnbiome: a public database of the healthy Taiwanese gut microbiome.
BMC Bioinform.
Amrita Chattopadhyay, Chien-Yueh Lee, Ya-Chin Lee, Chiang-Lin Liu, Hsin-Kuang Chen, Yung-Hua Li, Liang-Chuan Lai, Mong-Hsun Tsai, Yen-Hsuan Ni, Han-Mo Chiu, Tzu-Pin Lu, Eric Y. Chuang
2022 J jnl
CLIN_SKAT: an R package to conduct association analysis using functionally relevant variants.
BMC Bioinform.
Amrita Chattopadhyay, Ching-Yu Shih, Yu-Chen Hsu, Jyh-Ming Jimmy Juang, Eric Y. Chuang, Tzu-Pin Lu
2022 J jnl
ceRNAR: An R package for identification and analysis of ceRNA-miRNA triplets.
PLoS Comput. Biol.
Yi-Wen Hsiao, Lin Wang, Tzu-Pin Lu
2021 J jnl
CNVIntegrate: the first multi-ethnic database for identifying copy number variations associated with cancer.
Database J. Biol. Databases Curation
Amrita Chattopadhyay, Zi Han Teoh, Chi-Yun Wu, Jyh-Ming Jimmy Juang, Liang-Chuan Lai, Mong-Hsun Tsai, Chia-Hsin Wu, Tzu-Pin Lu, Eric Y. Chuang
2021 J jnl
Gene-set integrative analysis of multi-omics data using tensor-based association test.
Bioinform.
Sheng-Mao Chang, Meng Yang, Wenbin Lu, Yu-Jyun Huang, Yueyang Huang, Hung Hung, Jeffrey C. Miecznikowski, Tzu-Pin Lu, Jung-Ying Tzeng
2021 J jnl
High-performance deep learning pipeline predicts individuals in mixtures of DNA using sequencing data.
Briefings Bioinform.
Nam Nhut Phan, Amrita Chattopadhyay, Tsui-Ting Lee, Hsiang-I Yin, Tzu-Pin Lu, Liang-Chuan Lai, Hsiao-Lin Hwa, Mong-Hsun Tsai, Eric Y. Chuang
2021 J jnl
RNASeqR: An R Package for Automated Two-Group RNA-Seq Analysis Workflow.
IEEE ACM Trans. Comput. Biol. Bioinform.
Kuan-Hao Chao, Yi-Wen Hsiao, Yi-Fang Lee, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2021 J jnl
Transcript annotation tool (TransAT): an R package for retrieving annotations for transcript-specific genetic variants.
BMC Bioinform.
Ching-Yu Shih, Amrita Chattopadhyay, Chien-Hui Wu, Yu-Wen Tien, Tzu-Pin Lu
2020 J jnl
Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis.
PLoS Comput. Biol.
Amanda Brucker, Wenbin Lu, Rachel Marceau West, Qi-You Yu, Chuhsing Kate Hsiao, Tzu-Hung Hsiao, Ching-Heng Lin, Patrik K. E. Magnusson, Patrick F. Sullivan, Jin P. Szatkiewicz, Tzu-Pin Lu, Jung-Ying Tzeng
2020 — conf
Genome-Wide Association Study (GWAS) on Metabolic Syndrome in Subjects with Abdominal Obesity in a Taiwanese Population.
BIBM
Kuan-Hung Yeh, Ching-Heng Lin, Tzu-Hung Hsiao, Tzu-Pin Lu
2019 J jnl
VariED: the first integrated database of gene annotation and expression profiles for variants related to human diseases.
Database J. Biol. Databases Curation
Chien-Yueh Lee, Amrita Chattopadhyay, Li-Mei Chiang, Jyh-Ming Jimmy Juang, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2019 J jnl
anamiR: integrated analysis of MicroRNA and gene expression profiling.
BMC Bioinform.
Ti-Tai Wang, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2018 J jnl
CellExpress: a comprehensive microarray-based cancer cell line and clinical sample gene expression analysis online system.
Database J. Biol. Databases Curation
Yi-Fang Lee, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2018 J jnl
Probabilistic prioritization of candidate pathway association with pathway score.
BMC Bioinform.
Shu-Ju Lin, Tzu-Pin Lu, Qi-You Yu, Chuhsing Kate Hsiao
2017 J jnl
Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival.
BMC Bioinform.
Yu-Chiao Chiu, Li-Ju Wang, Tzu-Pin Lu, Tzu-Hung Hsiao, Eric Y. Chuang, Yidong Chen
2017 J jnl
iGC - an integrated analysis package of gene expression and copy number alteration.
BMC Bioinform.
Yi-Pin Lai, Liang-Bo Wang, Wei-An Wang, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
2016 J jnl
Cost-sensitive performance metric for comparing multiple ordinal classifiers.
Artif. Intell. Res.
Nysia I. George, Tzu-Pin Lu, Ching-Wei Chang
2013 J jnl
Concurrent analysis of copy number variation and gene expression: application in paired non-smoking female lung cancer patients.
Int. J. Data Min. Bioinform.
Pei-Chun Chen, Tzu-Pin Lu, Jung-Chih Chang, Liang-Chuan Lai, Mong-Hsun Tsai, Chuhsing Kate Hsiao, Eric Y. Chuang
2013 J jnl
Identification of reproducible gene expression signatures in lung adenocarcinoma.
BMC Bioinform.
Tzu-Pin Lu, Eric Y. Chuang, James J. Chen
2010 — conf
Concurrent analysis of copy number variation and gene expression: Application in paired non-smoking female lung cancer patients.
BIBM
Jung-Chih Chang, Tzu-Pin Lu, Eric Y. Chuang, Liang-Chuan Lai, Mong-Hsun Tsai, Chuhsing Kate Hsiao, Pei-Chun Chen
2010 — conf
Concurrent analysis of copy number variations and expression profiles to identify genes associated with tumorigenesis and survival outcome in lung adenocarcinoma.
BIBM
Tzu-Pin Lu, Liang-Chuan Lai, Chuhsing Kate Hsiao, Pei-Chun Chen, Mong-Hsun Tsai, Eric Y. Chuang