Tsukasa Fukunaga

11 papers Journal 10Unranked 1
YearRankTypeTitle / Venue / Authors
2023 J jnl
DeepRaccess: high-speed RNA accessibility prediction using deep learning.
Frontiers Bioinform.
Kaisei Hara, Natsuki Iwano, Tsukasa Fukunaga, Michiaki Hamada
2022 J jnl
Inverse Potts model improves accuracy of phylogenetic profiling.
Bioinform.
Tsukasa Fukunaga, Wataru Iwasaki
2022 J jnl
Mirage 2.0: fast and memory-efficient reconstruction of gene-content evolution considering heterogeneous evolutionary patterns among gene families.
Bioinform.
Tsukasa Fukunaga, Wataru Iwasaki
2021 J jnl
Umibato: estimation of time-varying microbial interaction using continuous-time regression hidden Markov model.
Bioinform.
Shion Hosoda, Tsukasa Fukunaga, Michiaki Hamada
2020 — conf
MotiMul: A significant discriminative sequence motif discovery algorithm with multiple testing correction.
BIBM
Koichi Mori, Haruka Ozaki, Tsukasa Fukunaga
2019 J jnl
Discovering novel mutation signatures by latent Dirichlet allocation with variational Bayes inference.
Bioinform.
Taro Matsutani, Yuki Ueno, Tsukasa Fukunaga, Michiaki Hamada
2018 J jnl
A Novel Method for Assessing the Statistical Significance of RNA-RNA Interactions Between Two Long RNAs.
J. Comput. Biol.
Tsukasa Fukunaga, Michiaki Hamada
2017 J jnl
Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants.
BMC Bioinform.
Tsukasa Fukunaga, Wataru Iwasaki
2017 J jnl
RIblast: an ultrafast RNA-RNA interaction prediction system based on a seed-and-extension approach.
Bioinform.
Tsukasa Fukunaga, Michiaki Hamada
2016 J jnl
Rtools: a web server for various secondary structural analyses on single RNA sequences.
Nucleic Acids Res.
Michiaki Hamada, Yukiteru Ono, Hisanori Kiryu, Kengo Sato, Yuki Kato, Tsukasa Fukunaga, Ryota Mori, Kiyoshi Asai
2015 J jnl
GroupTracker: Video tracking system for multiple animals under severe occlusion.
Comput. Biol. Chem.
Tsukasa Fukunaga, Shoko Kubota, Shoji Oda, Wataru Iwasaki