Toshihisa Takagi

103 papers A* 2A 2B 4C 3Misc 6Journal 57Unranked 29
YearRankTypeTitle / Venue / Authors
2020 J jnl
BioHackathon 2015: Semantics of data for life sciences and reproducible research.
F1000Research
Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan E. Bolton, Raoul Jean Pierre Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García Castro, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick S. Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy NguyenXuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron R. Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi
2019 J jnl
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services.
F1000Research
Toshiaki Katayama, Shuichi Kawashima, Gos Micklem, Shin Kawano, Jin-Dong Kim, Simon Kocbek, Shinobu Okamoto, Yue Wang, Hongyan Wu, Atsuko Yamaguchi, Yasunori Yamamoto, Erick Antezana, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Masaki Banno, Joachim Baran, Jerven T. Bolleman, Raoul Jean Pierre Bonnal, Hidemasa Bono, Jesualdo Tomás Fernández-Breis, Robert M. Buels, Matthew P. Campbell, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Leyla J. García, Pascale Gaudet, Emi Hattori, Robert Hoehndorf, Kotone Itaya, Maori Ito, Daniel Jamieson, Simon Jupp, Nick S. Juty, Alex Kalderimis, Fumihiro Kato, Hideya Kawaji, Takeshi Kawashima, Akira R. Kinjo, Yusuke Komiyama, Masaaki Kotera, Tatsuya Kushida, James Malone, Masaaki Matsubara, Satoshi Mizuno, Sayaka Mizutani, Hiroshi Mori, Yuki Moriya, Katsuhiko Murakami, Takeru Nakazato, Hiroyo Nishide, Yosuke Nishimura, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Hiromasa Ono, Yasset Pérez-Riverol, Daisuke Shinmachi, Andrea Splendiani, Francesco Strozzi, Shinya Suzuki, Junichi Takehara, Mark Thompson, Toshiaki Tokimatsu, Ikuo Uchiyama, Karin Verspoor, Mark D. Wilkinson, Sarala M. Wimalaratne, Issaku Yamada, Nozomi Yamamoto, Masayuki Yarimizu, Shoko Kawamoto, Toshihisa Takagi
2019 — conf
Building Knowledge Graph Across Different Subdomains Using Interlinking Ontology for Biomedical Concepts.
JIST (2)
Kouji Kozaki, Tatsuya Kushida, Yasunori Yamamoto, Toshihisa Takagi
2019 J jnl
Interconnection of Biological Knowledge Using NikkajiRDF and Interlinking Ontology for Biological Concepts.
New Gener. Comput.
Tatsuya Kushida, Kouji Kozaki, Takahiro Kawamura, Yuka Tateisi, Yasunori Yamamoto, Toshihisa Takagi
2019 — conf
Reconstruction of Hierarchical Structures in a Thesaurus-based Ontology through Curation by Domain Experts.
ICBO
Tatsuya Kushida, Kouji Kozaki, Yasunori Yamamoto, Atsuko Yamaguchi, Takahiro Kawamura, Takako Nakagawa, Yuka Tateisi, Toshihisa Takagi
2019 J jnl
TogoGenome/TogoStanza: modularized Semantic Web genome database.
Database J. Biol. Databases Curation
Toshiaki Katayama, Shuichi Kawashima, Shinobu Okamoto, Yuki Moriya, Hirokazu Chiba, Yuki Naito, Takatomo Fujisawa, Hiroshi Mori, Toshihisa Takagi
2018 — conf
A Quantitative Evaluation of Natural Language Question Interpretation for Question Answering Systems.
JIST
Takuto Asakura, Jin-Dong Kim, Yasunori Yamamoto, Yuka Tateisi, Toshihisa Takagi
2018 J jnl
A Quantitative Evaluation of Natural Language Question Interpretation for Question Answering Systems.
CoRR
Takuto Asakura, Jin-Dong Kim, Yasunori Yamamoto, Yuka Tateisi, Toshihisa Takagi
2018 J jnl
DNA Data Bank of Japan: 30th anniversary.
Nucleic Acids Res.
Yuichi Kodama, Jun Mashima, Takehide Kosuge, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
2018 — conf
Inference of Functions, Roles, and Applications of Chemicals Using Linked Open Data and Ontologies.
JIST
Tatsuya Kushida, Kouji Kozaki, Takahiro Kawamura, Yuka Tateisi, Yasunori Yamamoto, Toshihisa Takagi
2018 J jnl
NBDC RDF portal: a comprehensive repository for semantic data in life sciences.
Database J. Biol. Databases Curation
Shuichi Kawashima, Toshiaki Katayama, Hideki Hatanaka, Tatsuya Kushida, Toshihisa Takagi
2018 J jnl
The international nucleotide sequence database collaboration.
Nucleic Acids Res.
Ilene Karsch-Mizrachi, Toshihisa Takagi, Guy Cochrane
2017 J jnl
DNA Data Bank of Japan.
Nucleic Acids Res.
Jun Mashima, Yuichi Kodama, Takatomo Fujisawa, Toshiaki Katayama, Yoshihiro Okuda, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
2017 — conf
DrG at NTCIR­-13: MedWeb Task.
NTCIR
Morita Kazui, Toshihisa Takagi
2017 — conf
Efficient Construction of a New Ontology for Life Sciences by Sub-classifying Related Terms in the Japan Science, Technology Agency Thesaurus.
ICBO
Tatsuya Kushida, Kouji Kozaki, Yuka Tateisi, Katsutaro Watanabe, Takeshi Masuda, Katsuji Matsumura, Takahiro Kawamura, Toshihisa Takagi
2017 — conf
Refined JST Thesaurus Extended with Data from Other Open Life Science Data Sources.
JIST
Tatsuya Kushida, Yuka Tateisi, Takeshi Masuda, Katsutaro Watanabe, Katsuji Matsumura, Takahiro Kawamura, Kouji Kozaki, Toshihisa Takagi
2016 J jnl
DNA data bank of Japan (DDBJ) progress report.
Nucleic Acids Res.
Jun Mashima, Yuichi Kodama, Takehide Kosuge, Takatomo Fujisawa, Toshiaki Katayama, Hideki Nagasaki, Yoshihiro Okuda, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
2016 J jnl
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res.
Guy Cochrane, Ilene Karsch-Mizrachi, Toshihisa Takagi
2015 J jnl
The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data.
Nucleic Acids Res.
Yuichi Kodama, Jun Mashima, Takehide Kosuge, Toshiaki Katayama, Takatomo Fujisawa, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
2014 J jnl
DDBJ progress report: a new submission system for leading to a correct annotation.
Nucleic Acids Res.
Takehide Kosuge, Jun Mashima, Yuichi Kodama, Takatomo Fujisawa, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
2013 J jnl
DDBJ new system and service refactoring.
Nucleic Acids Res.
Osamu Ogasawara, Jun Mashima, Yuichi Kodama, Eli Kaminuma, Yasukazu Nakamura, Kousaku Okubo, Toshihisa Takagi
2012 J jnl
The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments.
Nucleic Acids Res.
Yuichi Kodama, Jun Mashima, Eli Kaminuma, Takashi Gojobori, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura
2012 J jnl
The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011.
BMC Bioinform.
Jin-Dong Kim, Ngan L. T. Nguyen, Yue Wang, Jun'ichi Tsujii, Toshihisa Takagi, Akinori Yonezawa
2012 J jnl
Tutorial videos of bioinformatics resources: online distribution trial in Japan named TogoTV.
Briefings Bioinform.
Shin Kawano, Hiromasa Ono, Toshihisa Takagi, Hidemasa Bono
2011 J jnl
Allie: a database and a search service of abbreviations and long forms.
Database J. Biol. Databases Curation
Yasunori Yamamoto, Atsuko Yamaguchi, Hidemasa Bono, Toshihisa Takagi
2011 J jnl
Bio-molecular Event Extraction with Markov Logic.
Comput. Intell.
Sebastian Riedel, Rune Sætre, Hong-Woo Chun, Toshihisa Takagi, Jun'ichi Tsujii
2011 J jnl
DDBJ progress report.
Nucleic Acids Res.
Eli Kaminuma, Takehide Kosuge, Yuichi Kodama, Hideo Aono, Jun Mashima, Takashi Gojobori, Hideaki Sugawara, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura
2011 — conf
Discriminative Application of String Similarity Methods to Chemical and Non-chemical Names for Biomedical Abbreviation Clustering.
BIBM
Atsuko Yamaguchi, Yasunori Yamamoto, Jin-Dong Kim, Toshihisa Takagi, Akinori Yonezawa
2011 — conf
Discriminative Optimization of String Similarity and Its Application to Biomedical Abbreviation Clustering.
ICMLA (2)
Atsuko Yamaguchi, Yasunori Yamamoto, Jin-Dong Kim, Toshihisa Takagi, Akinori Yonezawa
2011 J jnl
INOH: ontology-based highly structured database of signal transduction pathways.
Database J. Biol. Databases Curation
Satoko Yamamoto, Noriko Sakai, Hiromi Nakamura, Hiroshi Fukagawa, Ken Fukuda, Toshihisa Takagi
2011 J jnl
Interactive, multiscale navigation of large and complicated biological networks.
Bioinform.
Thanet Praneenararat, Toshihisa Takagi, Wataru Iwasaki
2011 — conf
Overview of Genia Event Task in BioNLP Shared Task 2011.
BioNLP@ACL (Shared Task)
Jin-Dong Kim, Yue Wang, Toshihisa Takagi, Akinori Yonezawa
2011 J jnl
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications.
J. Biomed. Semant.
Toshiaki Katayama, Mark D. Wilkinson, Rutger A. Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul Jean Pierre Bonnal, José María Fernández, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga, Vachiranee Limviphuvadh, E. Luke McCarthy, Yasukazu Nakamura, Yunsun Nam, Kozo Nishida, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi
2010 — conf
Authoring Computer-Understandable Semantic Summaries of Life Science Articles Optimized for Knowledge Mining.
ICDM (Workshops)
Steven B. Kraines, Weisen Guo, Toshihisa Takagi
2010 — conf
Bridging the Knowledge Gap between Research and Education through Textbooks.
ICWL
Steven B. Kraines, Takaki Makino, Weisen Guo, Haruo Mizutani, Toshihisa Takagi
2010 J jnl
DDBJ launches a new archive database with analytical tools for next-generation sequence data.
Nucleic Acids Res.
Eli Kaminuma, Jun Mashima, Yuichi Kodama, Takashi Gojobori, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
2010 J jnl
Figure classification in biomedical literature to elucidate disease mechanisms, based on pathways.
Artif. Intell. Medicine
Natsu Ishii, Asako Koike, Yasunori Yamamoto, Toshihisa Takagi
2010 — conf
Generating Literature-based Knowledge Discoveries in Life Sciences using Relationship Associations.
KDIR
Steven B. Kraines, Weisen Guo, Daisuke Hoshiyama, Haruo Mizutani, Toshihisa Takagi
2010 J jnl
Ligand-binding site prediction of proteins based on known fragment-fragment interactions.
Bioinform.
Kota Kasahara, Kengo Kinoshita, Toshihisa Takagi
2010 C conf
Literature-Based Knowledge Discovery from Relationship Associations Based on a DL Ontology Created from MeSH.
IC3K
Steven B. Kraines, Weisen Guo, Daisuke Hoshiyama, Takaki Makino, Haruo Mizutani, Yoshihiro Okuda, Yo Shidahara, Toshihisa Takagi
2010 — conf
Multiscale Service Design Method and Its Application to Sustainable Service for Prevention and Recovery from Dementia.
JSAI-isAI Workshops
Mihoko Otake, Motoichiro Kato, Toshihisa Takagi, Shuichi Iwata, Hajime Asama, Jun Ota
2010 — conf
Natural Language Query Processing for Life Science Knowledge - Position Paper.
AMT
Jin-Dong Kim, Yasunori Yamamoto, Atsuko Yamaguchi, Mitsuteru Nakao, Kenta Oouchida, Hong-Woo Chun, Toshihisa Takagi
2010 J jnl
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows.
J. Biomed. Semant.
Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi
2010 J jnl
TogoWS: integrated SOAP and REST APIs for interoperable bioinformatics Web services.
Nucleic Acids Res.
Toshiaki Katayama, Mitsuteru Nakao, Toshihisa Takagi
2009 — conf
A Markov Logic Approach to Bio-Molecular Event Extraction.
BioNLP@HLT-NAACL (Shared Task)
Sebastian Riedel, Hong-Woo Chun, Toshihisa Takagi, Jun'ichi Tsujii
2009 J jnl
BodyParts3D: 3D structure database for anatomical concepts.
Nucleic Acids Res.
Nobutaka Mitsuhashi, Kaori Fujieda, Takuro Tamura, Shoko Kawamoto, Toshihisa Takagi, Kousaku Okubo
2009 Misc conf
Classifying Biomedical Figures Using Combination of Bag of Keypoints and Bag of Words.
CISIS
Asako Koike, Toshihisa Takagi
2009 — conf
Coimagination Method: Communication Support System with Collected Images and Its Evaluation via Memory Task.
HCI (5)
Mihoko Otake, Motoichiro Kato, Toshihisa Takagi, Hajime Asama
2009 Misc conf
Collection of Disease Networks by Hybrid Curation Method and the Application for Pathway Analysis.
CISIS
Tatsuya Kushida, Takao Asanuma, Yoshihiro Okuda, Yo Shidahara, Toshihisa Takagi
2009 B conf
Development of coimagination method towards cognitive enhancement via image based interactive communication.
RO-MAN
Mihoko Otake, Motoichiro Kato, Toshihisa Takagi, Hajime Asama
2009 J jnl
Gendoo: Functional profiling of gene and disease features using MeSH vocabulary.
Nucleic Acids Res.
Takeru Nakazato, Hidemasa Bono, Hideo Matsuda, Toshihisa Takagi
2009 C conf
GuideLink: A Corpus Annotation System that Integrates the Management of Annotation Guidelines.
PACLIC
Kenta Oouchida, Jin-Dong Kim, Toshihisa Takagi, Jun'ichi Tsujii
2008 — conf
Figure Classification in Biomedical Literature towards Figure Mining.
BIBM
Natsu Ishii, Asako Koike, Yasunori Yamamoto, Toshihisa Takagi
2008 A* conf
On-line discovery of temporal-difference networks.
ICML
Takaki Makino, Toshihisa Takagi
2008 A* conf
Open brain simulator estimating internal state of human through external observation towards human biomechatronics.
ICRA
Mihoko Otake, Toshihisa Takagi, Hajime Asama
2008 — conf
Prediction of Protein Sub-cellular Localization using Information from Texts and Sequences.
BioNLP
Hong-Woo Chun, Chisato Yamasaki, Naomi Saichi, Masayuki Tanaka, Teruyoshi Hishiki, Tadashi Imanishi, Takashi Gojobori, Jin-Dong Kim, Jun'ichi Tsujii, Toshihisa Takagi
2007 J jnl
Biomedical knowledge navigation by literature clustering.
J. Biomed. Informatics
Yasunori Yamamoto, Toshihisa Takagi
2007 J jnl
Experimental Analysis of the Attribution of Own Actions to the Intention of Self or Others by the Multiple Forward Models.
J. Robotics Mechatronics
Mihoko Otake, Kohei Arai, Motoichiro Kato, Takaki Maeda, Yusuke Ikemoto, Kuniaki Kawabata, Toshihisa Takagi, Hajime Asama
2007 — conf
Experimental analysis and computational simulation of the attribution of own actions by the multiple forward models.
ROBIO
Mihoko Otake, Kohei Arai, Motoichiro Kato, Takaki Maeda, Yusuke Ikemoto, Kuniaki Kawabata, Toshihisa Takagi, Hajime Asama
2007 J jnl
Knowledge discovery based on an implicit and explicit conceptual network.
J. Assoc. Inf. Sci. Technol.
Asako Koike, Toshihisa Takagi
2007 J jnl
OReFiL: an online resource finder for life sciences.
BMC Bioinform.
Yasunori Yamamoto, Toshihisa Takagi
2007 — conf
Reconstruction of highly heterogeneous gene-content evolution across the three domains of life.
ISMB/ECCB (Supplement of Bioinformatics)
Wataru Iwasaki, Toshihisa Takagi
2006 Misc conf
Event Ontology: A Pathway-Centric Ontology for Biological Processes.
Pacific Symposium on Biocomputing
Tatsuya Kushida, Toshihisa Takagi, Ken-ichiro Fukuda
2006 J jnl
Improving the Performance of an SVM-Based Method for Predicting Protein-Protein Interactions.
Silico Biol.
Shinsuke Dohkan, Asako Koike, Toshihisa Takagi
2005 — conf
A Sentence Classification System for Multi Biomedical Literature Summarization.
ICDE Workshops
Yasunori Yamamoto, Toshihisa Takagi
2005 J jnl
Automatic extraction of gene/protein biological functions from biomedical text.
Bioinform.
Asako Koike, Yoshiki Niwa, Toshihisa Takagi
2005 J jnl
Cancer gene expression database (CGED): a database for gene expression profiling with accompanying clinical information of human cancer tissues.
Nucleic Acids Res.
Kikuya Kato, Riu Yamashita, Ryo Matoba, Morito Monden, Shinzaburo Noguchi, Toshihisa Takagi, Kenta Nakai
2005 J jnl
Research Paper: ALICE: An Algorithm to Extract Abbreviations from MEDLINE.
J. Am. Medical Informatics Assoc.
Hiroko Ao, Toshihisa Takagi
2004 B conf
A Pathway Editor for Literature-based Knowledge Curation.
APBC
Ken-ichiro Fukuda, Toshihisa Takagi
2004 — conf
A Practical Partial Parser for Biomedical Literature Summarization.
NLUCS
Yasunori Yamamoto, Toshihisa Takagi
2004 J jnl
Large-scale collection and characterization of promoters of human and mouse genes.
Silico Biol.
Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano
2004 J jnl
PRIME: automatically extracted PRotein Interactions and Molecular Information databas.
Silico Biol.
Asako Koike, Toshihisa Takagi
2004 J jnl
Predicting rules on organization of cis-regulatory elements, taking the order of elements into account.
Bioinform.
Goro Terai, Toshihisa Takagi
2004 C conf
Prediction of Protein-Protein Interactions Using Support Vector Machines.
BIBE
Shinsuke Dohkan, Asako Koike, Toshihisa Takagi
2004 J jnl
Preface - Third "Ontology Workshop on Ontology and Genomes".
Silico Biol.
Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender
2003 — conf
A Method to Retrieve Papers from MEDLINE: PETER System.
TREC
Hiroko Ao, Yasunori Yamamoto, Toshihisa Takagi
2003 Misc conf
DIGIT: A Novel Gene Finding Program by Combining Gene-Finders.
Pacific Symposium on Biocomputing
Tetsushi Yada, Yasushi Totoki, Y. Takaeda, Yasubumi Sakaki, Toshihisa Takagi
2003 J jnl
FREX: A query interface for biological processes with hierarchical and recursive structures.
Silico Biol.
Ken-ichiro Fukuda, Yuki Yamagata, Toshihisa Takagi
2003 J jnl
MELINA: motif extraction from promoter regions of potentially co-regulated genes.
Bioinform.
Natalia V. Poluliakh, Toshihisa Takagi, Kenta Nakai
2003 J jnl
Preface: The Second Workshop on Ontology and Genome.
Silico Biol.
Takako Takai-Igarashi, Toshihisa Takagi, Edgar Wingender
2002 J jnl
JSNP: a database of common gene variations in the Japanese population.
Nucleic Acids Res.
Mika Hirakawa, Toshihiro Tanaka, Yoichi Hashimoto, Masako Kuroda, Toshihisa Takagi, Yusuke Nakamura
2001 J jnl
Automated extraction of information on protein-protein interactions from the biological literature.
Bioinform.
Toshihide Ono, Haretsugu Hishigaki, Akira Tanigami, Toshihisa Takagi
2001 J jnl
Knowledge representation of signal transduction pathways.
Bioinform.
Ken-ichiro Fukuda, Toshihisa Takagi
2001 — conf
Ontology and functional genomics.
German Conference on Bioinformatics
Takako Takai-Igarashi, Toshihisa Takagi
2000 J jnl
PNAD-CSS: a workbench for constructing a protein name abbreviation dictionary.
Bioinform.
Mikio Yoshida, Ken-ichiro Fukuda, Toshihisa Takagi
1999 Misc conf
Clustering and Detection of 5' Splice Sites of mRNA by k Weight-Matrices Model.
Pacific Symposium on Biocomputing
Katsuhiko Murakami, Toshihisa Takagi
1999 J jnl
Estimating transcription factor bindability on DNA.
Bioinform.
Tatsuhiko Tsunoda, Toshihisa Takagi
1999 Misc conf
Time and Memory Efficient Algorithm for Extracting Palindromic and Repetitive Subsequences in Nucleic Acid Sequences.
Pacific Symposium on Biocomputing
Tatsuhiko Tsunoda, Masao Fukagawa, Toshihisa Takagi
1998 J jnl
Gene recognition by combination of several gene-finding programs.
Bioinform.
Katsuhiko Murakami, Toshihisa Takagi
1997 J jnl
Application of a deductive database system to search for topological and similar three-dimensional structures in protein.
Comput. Appl. Biosci.
Y. Tsukamoto, Kyoko Takiguchi, Kenji Satou, Emiko Furuichi, Toshihisa Takagi, Satoru Kuhara
1997 A conf
Automatic Construction of Knowledge Base from Biological Papers.
ISMB
Yoshihiro Ohta, Yasunori Yamamoto, Tomoko Okazaki, Ikuo Uchiyama, Toshihisa Takagi
1997 A conf
Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique.
ISMB
Kenji Satou, Toshihide Ono, Yoshihisa Yamamura, Emiko Furuichi, Satoru Kuhara, Toshihisa Takagi
1994 — conf
A Deductive Object-Oriented Language for Integrated Genome Databaser.
HICSS (5)
Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi
1994 — conf
Application of a Deductive Database System PACADE toward Discovery of Clusters of Similar Structures in Proteins.
HICSS (5)
Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Satoru Kuhara, Toshihisa Takagi
1994 — conf
Development of an integrated Database for Genome Mapping and Nucleotide Sequences.
HICSS (5)
Takahiko Suzuki, Toshihisa Takagi, Satoru Kuhara, Minoru Kanehisa
1993 J jnl
A deductive database system PACADE for analyzing 3-D and secondary structures of protein.
Comput. Appl. Biosci.
Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Toshihisa Takagi, Satoru Kuhara
1993 J jnl
Development of the Overlapping Oligonucleotide Database and its application to signal sequence search of the human genome.
Comput. Appl. Biosci.
Norihiro Sakamoto, Toshihisa Takagi, Yasubumi Sakaki
1993 B conf
Object-Oriented Database with Rule-Based Query Interface for Genomic Computation.
DASFAA
Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi
1992 J jnl
Evaluation of a deductive database system for CAD applications.
Syst. Comput. Jpn.
Toshihisa Takagi, Takahiko Suzuki, Susumu Goto, Kazuo Ushijima
1991 J jnl
Bidirectional inference of mode information for logic programs.
Syst. Comput. Jpn.
Neng-Fa Zhou, Kazuo Ushijima, Toshihisa Takagi
1990 B conf
A Matching Tree Oriented Abstract Machine for Prolog.
ICLP
Neng-Fa Zhou, Toshihisa Takagi, Kazuo Ushijima
1985 — conf
Implementation of Inferential Relational Database System.
FODO
Toshihisa Takagi, Fumihiro Matsuo, Shouichi Futamura, Kazuo Ushijima
1984 J jnl
GENAS: a database system for nucleic acid sequence analysis.
Nucleic Acids Res.
Satoru Kuhara, Fumihiro Matsuo, Syoichi Futamura, Atsushi Fujita, Takeshi Shinohara, Toshihisa Takagi, Yoshiyuki Sakaki