Tomás Martínek

28 papers B 4C 5Misc 2Journal 12Unranked 5

Year	Rank	Type	Title / Venue / Authors
2025	B	`conf`	DMA Calypte: Open-Source Ultra-Low Latency DMA Engine for FPGAs. FPL Vladislav Válek, Martin Spinler, Jakub Cabal, Tomás Martínek
2025	J	`jnl`	Evaluation of compliance with democratic and technical standards of i-voting in elections to academic senates in Czech higher education. CoRR Tomás Martínek, Michal Malý
2024	J	`jnl`	Developing and Benchmarking Sulfate and Sulfamate Force Field Parameters via Ab Initio Molecular Dynamics Simulations To Accurately Model Glycosaminoglycan Electrostatic Interactions. J. Chem. Inf. Model. Miguel Riopedre-Fernandez, Vojtech Kostal, Tomás Martínek, Hector Martinez-Seara, Denys Biriukov
2024	Misc	`conf`	LGBM2VHDL: Mapping of LightGBM Models to FPGA. FCCM Tomás Martínek, Jan Korenek, Tomás Cejka
2023	J	`jnl`	Evolutionary Optimized 3D WiFi Antennas Manufactured via Laser Powder Bed Fusion. IEEE Access Dominik Mair, Michael Renzler, Stanislav Kovar, Tomás Martínek, Tomas Kadavy, Simon Bergmueller, Andrada Horn, Jakob Braun, Lukas Kaserer
2021	J	`jnl`	SoluProt: prediction of soluble protein expression in Escherichia coli. Bioinform. Jirí Hon, Martin Marusiak, Tomás Martínek, Antonin Kunka, Jaroslav Zendulka, David Bednar, Jirí Damborský
2021	J	`jnl`	digIS: towards detecting distant and putative novel insertion sequence elements in prokaryotic genomes. BMC Bioinform. Janka Puterová, Tomás Martínek
2020	J	`jnl`	EnzymeMiner: automated mining of soluble enzymes with diverse structures, catalytic properties and stabilities. Nucleic Acids Res. Jirí Hon, Simeon Borko, Jan Stourac, Zbynek Prokop, Jaroslav Zendulka, David Bednar, Tomás Martínek, Jirí Damborský
2018	J	`jnl`	HotSpot Wizard 3.0: web server for automated design of mutations and smart libraries based on sequence input information. Nucleic Acids Res. Lenka Sumbalova, Jan Stourac, Tomás Martínek, David Bednar, Jirí Damborský
2017	J	`jnl`	FireProt: web server for automated design of thermostable proteins. Nucleic Acids Res. Milos Musil, Jan Stourac, Jaroslav Bendl, Jan Brezovsky, Zbynek Prokop, Jaroslav Zendulka, Tomás Martínek, David Bednar, Jirí Damborský
2017	J	`jnl`	pqsfinder: an exhaustive and imperfection-tolerant search tool for potential quadruplex-forming sequences in R. Bioinform. Jirí Hon, Tomás Martínek, Jaroslav Zendulka, Matej Lexa
2016	—	`conf`	Scanning System for Ballistic Analysis. CSOC (3) Tomás Martínek, Josef Kudelka, Milan Navrátil, Vojtech Kresálek
2014	J	`jnl`	On Identities in Modern Networks. J. Digit. Forensics Secur. Law Libor Polcak, Radek Hranicky, Tomás Martínek
2014	—	`conf`	Uneven Distribution of Potential Triplex Sequences in the Human Genome - In Silico Study using the R/Bioconductor Package Triplex. BIOINFORMATICS Matej Lexa, Tomás Martínek, Marie Brázdová
2013	J	`jnl`	Triplex: an R/Bioconductor package for identification and visualization of potential intramolecular triplex patterns in DNA sequences. Bioinform. Jirí Hon, Tomás Martínek, Kamil Rajdl, Matej Lexa
2011	J	`jnl`	A dynamic programming algorithm for identification of triplex-forming sequences. Bioinform. Matej Lexa, Tomás Martínek, Ivana Burgetová, Daniel Kopecek, Marie Brázdová
2011	—	`conf`	Architecture model for approximate tandem repeat detection. ASAP Tomás Martínek, Matej Lexa
2010	Misc	`conf`	Hardware Acceleration of Approximate Tandem Repeat Detection. FCCM Tomás Martínek, Matej Lexa
2009	C	`conf`	Architecture model for approximate palindrome detection. DDECS Tomás Martínek, Jan Vozenilek, Matej Lexa
2008	B	`conf`	GICS: Generic interconnection system. FPL Tamas Malek, Tomás Martínek, Jan Korenek
2008	—	`conf`	Hardware acceleration of approximate palindromes searching. FPT Tomás Martínek, Matej Lexa
2008	C	`conf`	NetCOPE: Platform for Rapid Development of Network Applications. DDECS Tomás Martínek, Martin Kosek
2007	C	`conf`	Automatic Generation of Circuits for Approximate String Matching. DDECS Tomás Martínek, Otto Fucík, Patrik Beck, Matej Lexa
2007	B	`conf`	High Level Abstraction Language as an Alternative to Embedded Processors for Internet Packet Processing in FPGA. FPL Tomas Dedek, Tomas Marek, Tomás Martínek
2007	C	`conf`	Online Protocol Testing for FPGA Based Fault Tolerant Systems. DSD Jiri Tobola, Zdenek Kotásek, Jan Korenek, Tomás Martínek, Martin Straka
2006	C	`conf`	A Flexible Technique for the Automatic Design of Approximate String Matching Architectures. DDECS Tomás Martínek, Jan Korenek, Otto Fucík, Matej Lexa
2006	B	`conf`	Extrinsic and Intrinsic Evolution of Multifunctional Combinational Modules. IEEE Congress on Evolutionary Computation Lukás Sekanina, Tomás Martínek, Zbysek Gajda
2005	—	`conf`	An Evolvable Image Filter: Experimental Evaluation of a Complete Hardware Implementation in FPGA. ICES Tomás Martínek, Lukás Sekanina