Tomoya Mori

24 papers A* 1B 1C 1Misc 2Journal 15Unranked 3
YearRankTypeTitle / Venue / Authors
2025 J jnl
A Method for Computing the Minimum Common Feedback Set for a Multilayer Network and Its Application to Analysis of Biological Data.
J. Inf. Process.
Shogo Nakashima, Tomoya Mori, Ruiming Li, Tatsuya Akutsu
2024 J jnl
DiCleave: a deep learning model for predicting human Dicer cleavage sites.
BMC Bioinform.
Lixuan Mu, Jiangning Song, Tatsuya Akutsu, Tomoya Mori
2023 J jnl
eSPRESSO: topological clustering of single-cell transcriptomics data to reveal informative genes for spatio-temporal architectures of cells.
BMC Bioinform.
Tomoya Mori, Toshiro Takase, Kuan-Chun Lan, Junko Yamane, Cantas Alev, Azuma Kimura, Kenji Osafune, Jun K. Yamashita, Tatsuya Akutsu, Hiroaki Kitano, Wataru Fujibuchi
2022 J jnl
Identification of periodic attractors in Boolean networks using a priori information.
PLoS Comput. Biol.
Ulrike Münzner, Tomoya Mori, Marcus Krantz, Edda Klipp, Tatsuya Akutsu
2022 B conf
On the Complexity of Tree Edit Distance with Variables.
ISAAC
Tatsuya Akutsu, Tomoya Mori, Naotoshi Nakamura, Satoshi Kozawa, Yuhei Ueno, Thomas N. Sato
2021 J jnl
Tree Edit Distance with Variables. Measuring the Similarity between Mathematical Formulas.
CoRR
Tatsuya Akutsu, Tomoya Mori, Naotoshi Nakamura, Satoshi Kozawa, Yuhei Ueno, Thomas N. Sato
2020 J jnl
Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit Distance.
J. Comput. Biol.
Feiqi Wang, Tatsuya Akutsu, Tomoya Mori
2020 J jnl
mROS: A Lightweight Runtime Environment of ROS 1 nodes for Embedded Devices.
J. Inf. Process.
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
2019 — conf
mROS: A Lightweight Runtime Environment for Robot Software Components onto Embedded Devices.
HEART
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
2018 Misc conf
Design concept of a lightweight runtime environment for robot software components onto embedded devices: work-in-progress.
EMSOFT
Hideki Takase, Tomoya Mori, Kazuyoshi Takagi, Naofumi Takagi
2017 J jnl
An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data.
Bioinform.
Yuki Kato, Tomoya Mori, Kengo Sato, Shingo Maegawa, Hiroshi Hosokawa, Tatsuya Akutsu
2017 C conf
Queueing theoretic approach to job assignment strategy considering various inter-arrival of job in fog computing.
APNOMS
Tomoya Mori, Yoichi Utsunomiya, Xuejun Tian, Takashi Okuda
2016 J jnl
A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models.
Comput. Stat. Data Anal.
Takanori Hasegawa, Atsushi Niida, Tomoya Mori, Teppei Shimamura, Rui Yamaguchi, Satoru Miyano, Tatsuya Akutsu, Seiya Imoto
2016 J jnl
Exact Identification of the Structure of a Probabilistic Boolean Network from Samples.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiaoqing Cheng, Tomoya Mori, Yushan Qiu, Wai-Ki Ching, Tatsuya Akutsu
2016 A* conf
Similar subtree search using extended tree inclusion.
ICDE
Tomoya Mori, Atsuhiro Takasu, Jesper Jansson, Jaewook Hwang, Takeyuki Tamura, Tatsuya Akutsu
2015 — conf
Experiments of position estimation by BLE beacons on actual situations.
GCCE
Tomoya Mori, Shinsuke Kajioka, Takahiro Uchiya, Ichi Takumi, Hiroshi Matsuo
2015 J jnl
Genomic data assimilation using a higher moment filtering technique for restoration of gene regulatory networks.
BMC Syst. Biol.
Takanori Hasegawa, Tomoya Mori, Rui Yamaguchi, Teppei Shimamura, Satoru Miyano, Seiya Imoto, Tatsuya Akutsu
2015 — —
Methods for Analyzing Tree-Structured Data and their Applications to Computational Biology.
Tomoya Mori
2015 J jnl
Similar Subtree Search Using Extended Tree Inclusion.
IEEE Trans. Knowl. Data Eng.
Tomoya Mori, Atsuhiro Takasu, Jesper Jansson, Jaewook Hwang, Takeyuki Tamura, Tatsuya Akutsu
2015 J jnl
Stochastic simulation of Boolean rxncon models: towards quantitative analysis of large signaling networks.
BMC Syst. Biol.
Tomoya Mori, Max Flöttmann, Marcus Krantz, Tatsuya Akutsu, Edda Klipp
2014 J jnl
An Efficient Data Assimilation Schema for Restoration and Extension of Gene Regulatory Networks Using Time-Course Observation Data.
J. Comput. Biol.
Takanori Hasegawa, Tomoya Mori, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Tatsuya Akutsu
2014 — conf
Experiment of indoor position presumption based on RSSI of Bluetooth LE beacon.
GCCE
Shinsuke Kajioka, Tomoya Mori, Takahiro Uchiya, Ichi Takumi, Hiroshi Matsuo
2012 J jnl
A Clique-Based Method Using Dynamic Programming for Computing Edit Distance Between Unordered Trees.
J. Comput. Biol.
Tomoya Mori, Takeyuki Tamura, Daiji Fukagawa, Atsuhiro Takasu, Etsuji Tomita, Tatsuya Akutsu
2011 Misc conf
An Improved Clique-Based Method for Computing Edit Distance between Unordered Trees and Its Application to Comparison of Glycan Structures.
CISIS
Tatsuya Akutsu, Tomoya Mori, Takeyuki Tamura, Daiji Fukagawa, Atsuhiro Takasu, Etsuji Tomita