Tohru Terada - RankMe

16 papers Journal 13Unranked 3

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	ColabReaction: Accelerating Transition State Searches with Machine Learning Potentials on Google Colaboratory. J. Chem. Inf. Model. Masayuki Karasawa, Chee Siang Leow, Hideaki Yajima, Shuta Arai, Hiromitsu Nishizaki, Tohru Terada, Hajime Sato
2022	J	`jnl`	Feedback-AVPGAN: Feedback-guided generative adversarial network for generating antiviral peptides. J. Bioinform. Comput. Biol. Kano Hasegawa, Yoshitaka Moriwaki, Tohru Terada, Cao Wei, Kentaro Shimizu
2022	J	`jnl`	Prediction of protein mononucleotide binding sites using AlphaFold2 and machine learning. Comput. Biol. Chem. Shohei Yamaguchi, Haruka Nakashima, Yoshitaka Moriwaki, Tohru Terada, Kentaro Shimizu
2021	J	`jnl`	EXPRORER: Rational Cosolvent Set Construction Method for Cosolvent Molecular Dynamics Using Large-Scale Computation. J. Chem. Inf. Model. Keisuke Yanagisawa, Yoshitaka Moriwaki, Tohru Terada, Kentaro Shimizu
2017	J	`jnl`	Development of a sugar-binding residue prediction system from protein sequences using support vector machine. Comput. Biol. Chem. Masaki Banno, Yusuke Komiyama, Cao Wei, Yuya Oku, Kokoro Ueki, Kazuya Sumikoshi, Shugo Nakamura, Tohru Terada, Kentaro Shimizu
2016	J	`jnl`	Development of a prediction system for tail-anchored proteins. BMC Bioinform. Shunsuke Shigemitsu, Cao Wei, Tohru Terada, Kentaro Shimizu
2015	J	`jnl`	Tyrosine Kinase Ligand-Receptor Pair Prediction by Using Support Vector Machine. Adv. Bioinformatics Masayuki Yarimizu, Cao Wei, Yusuke Komiyama, Kokoro Ueki, Shugo Nakamura, Kazuya Sumikoshi, Tohru Terada, Kentaro Shimizu
2014	J	`jnl`	Coarse-grained molecular dynamics simulations of protein-ligand binding. J. Comput. Chem. Tatsuki Negami, Kentaro Shimizu, Tohru Terada
2014	J	`jnl`	Energy Landscape of All-Atom Protein-Protein Interactions Revealed by Multiscale Enhanced Sampling. PLoS Comput. Biol. Kei Moritsugu, Tohru Terada, Akinori Kidera
2012	J	`jnl`	Minimum Free Energy Path of Ligand-Induced Transition in Adenylate Kinase. PLoS Comput. Biol. Yasuhiro Matsunaga, Hiroshi Fujisaki, Tohru Terada, Tadaomi Furuta, Kei Moritsugu, Akinori Kidera
2010	J	`jnl`	Multicanonical J. Comput. Chem. Ryota Jono, Yuusuke Watanabe, Kentaro Shimizu, Tohru Terada
2010	J	`jnl`	Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines. Adv. Bioinformatics Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Cao Wei, Ge Zhenyi, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu
2009	—	`conf`	Computational Protocol for Screening GPI-anchored Proteins. BICoB Cao Wei, Kazuya Sumikoshi, Tohru Terada, Shugo Nakamura, Katsuhiko Kitamoto, Kentaro Shimizu
2006	—	`conf`	Insight of the Signal Motif of GPI-(like)-anchored Proteins by using SVM. BIOCOMP Cao Wei, Kazuya Sumikoshi, Tohru Terada, Shugo Nakamura, Kentaro Shimizu
2006	J	`jnl`	ROKU: a novel method for identification of tissue-specific genes. BMC Bioinform. Koji Kadota, Jiazhen Ye, Yuji Nakai, Tohru Terada, Kentaro Shimizu
2004	—	`conf`	Programming Environment Based on Distributed Shared Arrays for High-Performance Scientific Computing. SAINT Workshops Akira Nomoto, Wataru Kaneko, Tohru Terada, Shugo Nakamura, Kentaro Shimizu