Todd Lingren

29 papers Misc 7Journal 18Unranked 4
YearRankTypeTitle / Venue / Authors
2021 Misc conf
Evaluation of the Portability of Natural Language Processing-based Computable Phenotypes in the eMERGE Network.
AMIA
Jennifer A. Pacheco, Luke V. Rasmussen, Ken Wiley, Thomas N. Person, David J. Cronkite, Sunghwan Sohn, Shawn N. Murphy, Justin H. Gundelach, Vivian S. Gainer, Victor M. Castro, Cong Liu, Todd Lingren, Frank D. Mentch, Agnes S. Sundaresan, Garrett Eickelberg, Valerie Willis, Al'ona Furmanchuk, Roshan Patel, David S. Carrell, Marc S. Williams, Elizabeth W. Karlson, Jodell E. Linder, Yuan Luo, Chunhua Weng, Wei-Qi Wei
2019 J jnl
Facilitating phenotype transfer using a common data model.
J. Biomed. Informatics
George Hripcsak, Ning Shang, Peggy L. Peissig, Luke V. Rasmussen, Cong Liu, Barbara Benoit, Robert J. Carroll, David S. Carrell, Joshua C. Denny, Ozan Dikilitas, Vivian S. Gainer, Kayla Marie Howell, Jeffrey G. Klann, Iftikhar J. Kullo, Todd Lingren, Frank D. Mentch, Shawn N. Murphy, Karthik Natarajan, Chunhua Weng
2019 J jnl
Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network.
J. Biomed. Informatics
Ning Shang, Cong Liu, Luke V. Rasmussen, Casey N. Ta, Robert J. Carroll, Barbara Benoit, Todd Lingren, Ozan Dikilitas, Frank D. Mentch, David S. Carrell, Wei-Qi Wei, Yuan Luo, Vivian S. Gainer, Iftikhar J. Kullo, Jennifer A. Pacheco, Hakon Hakonarson, Theresa L. Walunas, Joshua C. Denny, Chunhua Weng
2018 J jnl
Decentralized and reproducible geocoding and characterization of community and environmental exposures for multisite studies.
J. Am. Medical Informatics Assoc.
Cole Brokamp, Chris Wolfe, Todd Lingren, John Harley, Patrick B. Ryan
2018 J jnl
Designing and evaluating an automated system for real-time medication administration error detection in a neonatal intensive care unit.
J. Am. Medical Informatics Assoc.
Yizhao Ni, Todd Lingren, Eric S. Hall, Matthew Leonard, Kristin Melton, Eric S. Kirkendall
2018 J jnl
Electronic medical records as a replacement for prospective research data collection in postoperative pain and opioid response studies.
Int. J. Medical Informatics
Todd Lingren, Senthilkumar Sadhasivam, Xue Zhang, Keith Marsolo
2017 Misc conf
Designing and Evaluating an Automated System for Real-time Medication Administration Error Detection in a Neonatal Intensive Care Unit.
AMIA
Yizhao Ni, Todd Lingren, Eric S. Hall, Matthew Leonard, Kristin Melton, Eric S. Kirkendall
2017 Misc conf
Integrating Smart Pump Infusion Data with Electronic Health Record Data to Analyze Medication Administration Alerts.
AMIA
Todd Lingren, Yizhao Ni, Eric S. Hall, Matthew Leonard, Eric S. Kirkendall, Kristin Melton
2016 J jnl
Developing an Algorithm to Detect Early Childhood Obesity in Two Tertiary Pediatric Medical Centers.
Appl. Clin. Inform.
Cassandra Brady, Bahram Namjou, Stephanie Kennebeck, Jonathan Bickel, Nandan Patibandla, Yizhao Ni, Sara Van Driest, Lixin Chen, Ashton Roach, Beth Cobb, Jacqueline Kirby, Joshua C. Denny, Lisa Bailey-Davis, Marc S. Williams, Keith Marsolo, Imre Solti, Ingrid A. Holm, John Harley, Isaac S. Kohane, Guergana Savova, Nancy Crimmins, Todd Lingren, Vidhu Thaker
2016 J jnl
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability.
J. Am. Medical Informatics Assoc.
Jacqueline Kirby, Peter Speltz, Luke V. Rasmussen, Melissa A. Basford, Omri Gottesman, Peggy L. Peissig, Jennifer A. Pacheco, Gerard Tromp, Jyotishman Pathak, David S. Carrell, Stephen B. Ellis, Todd Lingren, William K. Thompson, Guergana Savova, Jonathan L. Haines, Dan M. Roden, Paul A. Harris, Joshua C. Denny
2015 J jnl
An end-to-end hybrid algorithm for automated medication discrepancy detection.
BMC Medical Informatics Decis. Mak.
Qi Li, Stephen Andrew Spooner, Megan Kaiser, Nataline Lingren, Jessica Robbins, Todd Lingren, Huaxiu Tang, Imre Solti, Yizhao Ni
2015 J jnl
Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department.
J. Am. Medical Informatics Assoc.
Yizhao Ni, Stephanie Kennebeck, Judith W. Dexheimer, Constance M. McAneney, Huaxiu Tang, Todd Lingren, Qi Li, Haijun Zhai, Imre Solti
2015 J jnl
Automated detection of medication administration errors in neonatal intensive care.
J. Biomed. Informatics
Qi Li, Eric S. Kirkendall, Eric S. Hall, Yizhao Ni, Todd Lingren, Megan Kaiser, Nataline Lingren, Haijun Zhai, Imre Solti, Kristin Melton
2015 J jnl
Desiderata for computable representations of electronic health records-driven phenotype algorithms.
J. Am. Medical Informatics Assoc.
Huan Mo, William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Guoqian Jiang, Richard C. Kiefer, Qian Zhu, Jie Xu, Enid N. H. Montague, David S. Carrell, Todd Lingren, Frank D. Mentch, Yizhao Ni, Firas H. Wehbe, Peggy L. Peissig, Gerard Tromp, Eric B. Larson, Christopher G. Chute, Jyotishman Pathak, Joshua C. Denny, Peter Speltz, Abel N. Kho, Gail P. Jarvik, Cosmin Adrian Bejan, Marc S. Williams, Kenneth Borthwick, Terrie E. Kitchner, Dan M. Roden, Paul A. Harris
2015 J jnl
Increasing the efficiency of trial-patient matching: automated clinical trial eligibility Pre-screening for pediatric oncology patients.
BMC Medical Informatics Decis. Mak.
Yizhao Ni, Jordan Wright, John Perentesis, Todd Lingren, Louise Deléger, Megan Kaiser, Isaac S. Kohane, Imre Solti
2014 Misc conf
Automated Clinical Trial Eligibility Pre-Screening: Increasing the Efficiency of Participant Identification for Clinical Trials.
AMIA
Yizhao Ni, Stephanie Kennebeck, Constance M. McAneney, Judith W. Dexheimer, Todd Lingren, Qi Li, Haijun Zhai, Imre Solti
2014 Misc conf
Detecting Epilepsy Diagnosis in Clinical Notes: A Comparison of Traditional Text Classification Methods.
AMIA
Todd Lingren, Pawel Matykiewicz, Yizhao Ni, Shannon M. Standridge, Katherine D. Holland, Imre Solti, Tracy A. Glauser, John Pestian
2014 J jnl
Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in clinical trial announcements.
J. Am. Medical Informatics Assoc.
Todd Lingren, Louise Deléger, Katalin Molnár, Haijun Zhai, Jareen Meinzen-Derr, Megan Kaiser, Laura Stoutenborough, Qi Li, Imre Solti
2014 J jnl
Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research.
J. Biomed. Informatics
Louise Deléger, Todd Lingren, Yizhao Ni, Megan Kaiser, Laura Stoutenborough, Keith Marsolo, Michal Kouril, Katalin Molnár, Imre Solti
2014 J jnl
Research and applications: Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care.
J. Am. Medical Informatics Assoc.
Qi Li, Kristin Melton, Todd Lingren, Eric S. Kirkendall, Eric S. Hall, Haijun Zhai, Yizhao Ni, Megan Kaiser, Laura Stoutenborough, Imre Solti
2013 J jnl
A sequence labeling approach to link medications and their attributes in clinical notes and clinical trial announcements for information extraction.
J. Am. Medical Informatics Assoc.
Qi Li, Haijun Zhai, Louise Deléger, Todd Lingren, Megan Kaiser, Laura Stoutenborough, Imre Solti
2013 J jnl
Large-scale evaluation of automated clinical note de-identification and its impact on information extraction.
J. Am. Medical Informatics Assoc.
Louise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti
2013 J jnl
Mining FDA drug labels for medical conditions.
BMC Medical Informatics Decis. Mak.
Qi Li, Louise Deléger, Todd Lingren, Haijun Zhai, Megan Kaiser, Laura Stoutenborough, Anil G. Jegga, Kevin Bretonnel Cohen, Imre Solti
2013 Misc conf
Predicting the Need for Pediatric Intensive Care Unit (PICU) Transfer for Newly Hospitalized Children with Machine Learning.
AMIA
Haijun Zhai, Patrick Brady, Qi Li, Todd Lingren, Yizhao Ni, Derek S. Wheeler, Imre Solti
2012 Misc conf
Building Gold Standard Corpora for Medical Natural Language Processing Tasks.
AMIA
Louise Deléger, Qi Li, Todd Lingren, Megan Kaiser, Katalin Molnár, Laura Stoutenborough, Michal Kouril, Keith Marsolo, Imre Solti
2012 — conf
Cheap, Fast, and Good Enough for the Non-biomedical Domain but is It Usable for Clinical Natural Language Processing? Evaluating Crowdsourcing for Clinical Trial Announcement Named Entity Annotations.
HISB
Haijun Zhai, Todd Lingren, Louise Deléger, Qi Li, Megan Kaiser, Laura Stoutenborough, Imre Solti
2012 — conf
Linking Medications and Their Attributes in Clinical Notes and Clinical Trial Announcements for Information Extraction: A Sequence Labeling Approach.
HISB
Qi Li, Haijun Zhai, Louise Deléger, Todd Lingren, Megan Kaiser, Laura Stoutenborough, Imre Solti
2012 — conf
Pre-annotating Clinical Notes and Clinical Trial Announcements for Gold Standard Corpus Development: Evaluating the Impact on Annotation Speed and Potential Bias.
HISB
Todd Lingren, Louise Deléger, Katalin Molnár, Haijun Zhai, Jareen Meinzen-Derr, Megan Kaiser, Laura Stoutenborough, Qi Li, Imre Solti
2012 — conf
Using Natural Language Processing and the Electronic Health Record for Appendicitis Risk Stratification.
HISB
Louise Deléger, Holly Brodzinski, Haijun Zhai, Qi Li, Todd Lingren, Eric S. Kirkendall, Evaline Alessandrini, Imre Solti