Tobias Fehlmann

24 papers Journal 24
YearRankTypeTitle / Venue / Authors
2023 J jnl
isomiRdb: microRNA expression at isoform resolution.
Nucleic Acids Res.
Ernesto Aparicio-Puerta, Pascal Hirsch, Georges Pierre Schmartz, Tobias Fehlmann, Verena Keller, Annika Engel, Fabian Kern, Michael Hackenberg, Andreas Keller
2023 J jnl
miEAA 2023: updates, new functional microRNA sets and improved enrichment visualizations.
Nucleic Acids Res.
Ernesto Aparicio-Puerta, Pascal Hirsch, Georges Pierre Schmartz, Fabian Kern, Tobias Fehlmann, Andreas Keller
2022 J jnl
BusyBee Web: towards comprehensive and differential composition-based metagenomic binning.
Nucleic Acids Res.
Georges Pierre Schmartz, Pascal Hirsch, Jérémy Amand, Jan Dastbaz, Tobias Fehlmann, Fabian Kern, Rolf Müller, Andreas Keller
2022 J jnl
PLSDB: advancing a comprehensive database of bacterial plasmids.
Nucleic Acids Res.
Georges Pierre Schmartz, Anna Hartung, Pascal Hirsch, Fabian Kern, Tobias Fehlmann, Rolf Müller, Andreas Keller
2022 J jnl
miRNATissueAtlas2: an update to the human miRNA tissue atlas.
Nucleic Acids Res.
Andreas Keller, Laura Gröger, Thomas Tschernig, Jeffrey Solomon, Omar Laham, Nicholas Schaum, Viktoria Wagner, Fabian Kern, Georges Pierre Schmartz, Yongping Li, Adam Borcherding, Carola Meier, Tony Wyss-Coray, Eckart Meese, Tobias Fehlmann, Nicole Ludwig
2021 J jnl
Aviator: a web service for monitoring the availability of web services.
Nucleic Acids Res.
Tobias Fehlmann, Fabian Kern, Pascal Hirsch, Robin Steinhaus, Dominik Seelow, Andreas Keller
2021 J jnl
Encyclopedia of tools for the analysis of miRNA isoforms.
Briefings Bioinform.
Georges Pierre Schmartz, Fabian Kern, Tobias Fehlmann, Viktoria Wagner, Bastian Fromm, Andreas Keller
2021 J jnl
miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale.
Nucleic Acids Res.
Tobias Fehlmann, Fabian Kern, Omar Laham, Christina Backes, Jeffrey Solomon, Pascal Hirsch, Carsten Volz, Rolf Müller, Andreas Keller
2021 J jnl
miRTargetLink 2.0 - interactive miRNA target gene and target pathway networks.
Nucleic Acids Res.
Fabian Kern, Ernesto Aparicio-Puerta, Yongping Li, Tobias Fehlmann, Tim Kehl, Viktoria Wagner, Kamalika Ray, Nicole Ludwig, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2020 J jnl
What's the target: understanding two decades of in silico microRNA-target prediction.
Briefings Bioinform.
Fabian Kern, Christina Backes, Pascal Hirsch, Tobias Fehlmann, Martin Hart, Eckart Meese, Andreas Keller
2020 J jnl
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems.
Nucleic Acids Res.
Fabian Kern, Tobias Fehlmann, Jeffrey Solomon, Louisa Schwed, Nadja Liddy Grammes, Christina Backes, Kendall Van Keuren-Jensen, David W. Craig, Eckart Meese, Andreas Keller
2020 J jnl
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database.
Nucleic Acids Res.
Tim Kehl, Fabian Kern, Christina Backes, Tobias Fehlmann, Daniel Stöckel, Eckart Meese, Hans-Peter Lenhof, Andreas Keller
2020 J jnl
miRSwitch: detecting microRNA arm shift and switch events.
Nucleic Acids Res.
Fabian Kern, Jérémy Amand, Ilya Senatorov, Alina Isakova, Christina Backes, Eckart Meese, Andreas Keller, Tobias Fehlmann
2019 J jnl
A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites.
Briefings Bioinform.
Tobias Fehlmann, Shashwat Sahay, Andreas Keller, Christina Backes
2019 J jnl
Conservation and Relevance of Pharmacophore Point Types.
J. Chem. Inf. Model.
Tobias Fehlmann, Michael C. Hutter
2019 J jnl
DynaVenn: web-based computation of the most significant overlap between ordered sets.
BMC Bioinform.
Jérémy Amand, Tobias Fehlmann, Christina Backes, Andreas Keller
2019 J jnl
Machine Learning to Detect Alzheimer's Disease from Circulating Non-coding RNAs.
Genom. Proteom. Bioinform.
Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Manfred Gogol, Walter Maetzler, Stephanie Deutscher, Simone Gurlit, Claudia Schulte, Anna-Katharina von Thaler, Christian Deuschle, Florian G. Metzger, Daniela Berg, Ulrike Suenkel, Verena Keller, Christina Backes, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2019 J jnl
PLSDB: a resource of complete bacterial plasmids.
Nucleic Acids Res.
Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller
2018 J jnl
A high-resolution map of the human small non-coding transcriptome.
Bioinform.
Tobias Fehlmann, Christina Backes, Julia Alles, Ulrike Fischer, Martin Hart, Fabian Kern, Hilde Langseth, Trine Rounge, Sinan Ugur Umu, Mustafa Kahraman, Thomas Laufer, Jan Haas, Cord Staehler, Nicole Ludwig, Matthias Hübenthal, Benjamin Meder, Andre Franke, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2018 J jnl
Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development.
Genom. Proteom. Bioinform.
Andreas Keller, Tobias Fehlmann, Nicole Ludwig, Mustafa Kahraman, Thomas Laufer, Christina Backes, Claus Vogelmeier, Caroline Diener, Frank Biertz, Christian Herr, Rudolf A. Jörres, Hans-Peter Lenhof, Eckart Meese, Robert Bals
2018 J jnl
IMOTA: an interactive multi-omics tissue atlas for the analysis of human miRNA-target interactions.
Nucleic Acids Res.
Valeria Palmieri, Christina Backes, Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Eckart Meese, Andreas Keller
2018 J jnl
miRCarta: a central repository for collecting miRNA candidates.
Nucleic Acids Res.
Christina Backes, Tobias Fehlmann, Fabian Kern, Tim Kehl, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2017 J jnl
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation.
Nucleic Acids Res.
Cedric Christian Laczny, Christina Kiefer, Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller
2017 J jnl
miRPathDB: a new dictionary on microRNAs and target pathways.
Nucleic Acids Res.
Christina Backes, Tim Kehl, Daniel Stöckel, Tobias Fehlmann, Lara Schneider, Eckart Meese, Hans-Peter Lenhof, Andreas Keller