Timothy F. Oliver

20 papers A 3B 1Misc 1Journal 7Unranked 7
YearRankTypeTitle / Venue / Authors
2009 J jnl
High Speed Biological Sequence Analysis With Hidden Markov Models on Reconfigurable Platforms.
IEEE Trans. Inf. Technol. Biomed.
Timothy F. Oliver, Bertil Schmidt, Yanto Jakop, Douglas L. Maskell
2009 — —
Wire level encapsulation framework for increasing FPGA design productivity
Timothy F. Oliver
2008 J jnl
Integrating FPGA acceleration into HMMer.
Parallel Comput.
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
2007 — conf
C-Based Design Methodology for FPGA Implementation of ClustalW MSA.
PRIB
Yan Lin Aung, Douglas L. Maskell, Timothy F. Oliver, Bertil Schmidt, William Bong
2007 A conf
High Performance Database Searching with HMMer on FPGAs.
IPDPS
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
2007 J jnl
MPI-HMMER-Boost: Distributed FPGA Acceleration.
J. VLSI Signal Process.
John Paul Walters, Xiandong Meng, Vipin Chaudhary, Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt, Darran Nathan, Joseph I. Landman
2007 J jnl
Prerouted FPGA Cores for Rapid System Construction in a Dynamic Reconfigurable System.
EURASIP J. Embed. Syst.
Timothy F. Oliver, Douglas L. Maskell
2006 Misc conf
Accelerating the Viterbi Algorithm for Profile Hidden Markov Models Using Reconfigurable Hardware.
International Conference on Computational Science (1)
Timothy F. Oliver, Bertil Schmidt, Yanto Jakop, Douglas L. Maskell
2006 B conf
Execution Objects for Dynamically Reconfigurable FPGA Systems.
FPL
Timothy F. Oliver, Douglas L. Maskell
2006 J jnl
High-speed Multiple Sequence Alignment on a reconfigurable platform.
Int. J. Bioinform. Res. Appl.
Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Darran Nathan, Ralf Clemens
2006 — conf
Pre-Routed FPGA Cores for Rapid System Construction in a Dynamic Reconfigurable System.
Dynamically Reconfigurable Architectures
Douglas L. Maskell, Timothy F. Oliver
2005 — conf
A reconfigurable architecture for scanning biosequence databases.
ISCAS (5)
Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Achutavarrier Prasad Vinod
2005 — conf
An FPGA Model for Developing Dynamic Circuit Computing.
FPT
Timothy F. Oliver, Douglas L. Maskell
2005 — conf
Biological Sequence Analysis with Hidden Markov Models on an FPGA.
Asia-Pacific Computer Systems Architecture Conference
Jacop Yanto, Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell
2005 A conf
Hyper customized processors for bio-sequence database scanning on FPGAs.
FPGA
Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell
2005 — conf
Multiple Sequence Alignment on an FPGA.
ICPADS (2)
Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Darran Nathan, Ralf Clemens
2005 J jnl
Reconfigurable architectures for bio-sequence database scanning on FPGAs.
IEEE Trans. Circuits Syst. II Express Briefs
Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell
2005 J jnl
Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW.
Bioinform.
Timothy F. Oliver, Bertil Schmidt, Darran Nathan, Ralf Clemens, Douglas L. Maskell
2004 A conf
High Performance Biosequence Database Scanning on Reconfigurable Platforms.
IPDPS
Timothy F. Oliver, Bertil Schmidt
2003 — conf
Towards Run-Time Re-Configurable Techniques for Real-Time Embedded Applications.
Engineering of Reconfigurable Systems and Algorithms
Timothy F. Oliver, Douglas L. Maskell