Timothy C. Germann

23 papers A 1Journal 18Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
Corrigendum to "Evaluating disease surveillance strategies for early outbreak detection in contact networks with varying community structure" [Soc. Netw. 79 (2024) 122-132].
Soc. Networks
Axel Browne, David Butts, Edgar Jaramillo-Rodriguez, Nidhi Parikh, Geoffrey Fairchild, Zach Needell, Cristian Poliziani, Tom Wenzel, Timothy C. Germann, Sara Y. Del Valle
2025 — conf
Unveiling Process-Structure Mapping with a Deep Variational Autoencoder.
ICCVW
Avanish Mishra, Brenden William Hamilton, Mashroor Shafat Nitol, Nithin Mathew, Kipton Barros, Timothy C. Germann, Saryu Fensin
2024 J jnl
Evaluating disease surveillance strategies for early outbreak detection in contact networks with varying community structure.
Soc. Networks
Axel Browne, David Butts, Edgar Jaramillo-Rodriguez, Nidhi Parikh, Geoffrey Fairchild, Zach Needell, Cristian Poliziani, Tom Wenzel, Timothy C. Germann, Sara Y. Del Valle
2022 J jnl
A survey of software implementations used by application codes in the Exascale Computing Project.
Int. J. High Perform. Comput. Appl.
Thomas M. Evans, Andrew R. Siegel, Erik W. Draeger, Jack Deslippe, Marianne M. Francois, Timothy C. Germann, William E. Hart, Daniel F. Martin
2022 — conf
Accurate Calibration of Agent-based Epidemiological Models with Neural Network Surrogates.
Healthcare AI and COVID-19 Workshop
Rushil Anirudh, Jayaraman J. Thiagarajan, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
2022 J jnl
Cabana: A Performance Portable Library for Particle-Based Simulations.
J. Open Source Softw.
Stuart R. Slattery, Samuel Temple Reeve, Christoph Junghans, Damien Lebrun-Grandié, Robert F. Bird, Guangye Chen, Shane Fogerty, Yuxing Qiu, Stephan Schulz, Aaron Scheinberg, Austin Isner, Kwitae Chong, Stan G. Moore, Timothy C. Germann, James F. Belak, Susan M. Mniszewski
2022 J jnl
GLUE Code: A framework handling communication and interfaces between scales.
J. Open Source Softw.
Aleksandra Pachalieva, Robert S. Pavel, Javier E. Santos, Abdourahmane Diaw, Nicholas Lubbers, Mohammed Mehana, Jeffrey R. Haack, Hari S. Viswanathan, Daniel Livescu, Timothy C. Germann, Christoph Junghans
2022 — conf
Machine Learning-Powered Mitigation Policy Optimization in Epidemiological Models.
Healthcare AI and COVID-19 Workshop
Jayaraman J. Thiagarajan, Rushil Anirudh, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
2022 J jnl
Predictive Scale-Bridging Simulations through Active Learning.
CoRR
Satish Karra, Mohammed Mehana, Nicholas Lubbers, Yu Chen, Abdourahmane Diaw, Javier E. Santos, Aleksandra Pachalieva, Robert S. Pavel, Jeffrey R. Haack, Michael M. McKerns, Christoph Junghans, Qinjun Kang, Daniel Livescu, Timothy C. Germann, Hari S. Viswanathan
2021 J jnl
A physics-informed and hierarchically regularized data-driven model for predicting fluid flow through porous media.
J. Comput. Phys.
Kun Wang, Yu Chen, Mohammed Mehana, Nicholas Lubbers, Kane C. Bennett, Qinjun Kang, Hari S. Viswanathan, Timothy C. Germann
2021 J jnl
Co-design in the Exascale Computing Project.
Int. J. High Perform. Comput. Appl.
Timothy C. Germann
2021 J jnl
Performance Portability in the Exascale Computing Project: Exploration Through a Panel Series.
Comput. Sci. Eng.
Anshu Dubey, Lois Curfman McInnes, Rajeev Thakur, Erik W. Draeger, Thomas M. Evans, Timothy C. Germann, William E. Hart
2020 J jnl
Accurate Calibration of Agent-based Epidemiological Models with Neural Network Surrogates.
CoRR
Rushil Anirudh, Jayaraman J. Thiagarajan, Peer-Timo Bremer, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
2020 J jnl
Automated discovery of a robust interatomic potential for aluminum.
CoRR
Justin S. Smith, Benjamin T. Nebgen, Nithin Mathew, Jie Chen, Nicholas Lubbers, Leonid Burakovsky, Sergei Tretiak, Hai Ah Nam, Timothy C. Germann, Saryu Fensin, Kipton Barros
2020 J jnl
Machine Learning-Powered Mitigation Policy Optimization in Epidemiological Models.
CoRR
Jayaraman J. Thiagarajan, Peer-Timo Bremer, Rushil Anirudh, Timothy C. Germann, Sara Y. Del Valle, Frederick H. Streitz
2018 J jnl
The basic matrix library (BML) for quantum chemistry.
J. Supercomput.
Nicolas Bock, Christian F. A. Negre, Susan M. Mniszewski, Jamaludin Mohd-Yusof, Bálint Aradi, Jean-Luc Fattebert, Daniel Osei-Kuffuor, Timothy C. Germann, Anders M. N. Niklasson
2015 — conf
Database assisted distribution to improve fault tolerance for multiphysics applications.
Co-HPC@SC
Robert S. Pavel, Allen L. McPherson, Timothy C. Germann, Christoph Junghans
2015 J jnl
Distributed Database Kriging for Adaptive Sampling (D
Comput. Phys. Commun.
Dominic Roehm, Robert S. Pavel, Kipton Barros, Bertrand Rouet-Leduc, Allen L. McPherson, Timothy C. Germann, Christoph Junghans
2014 J jnl
Spatial adaptive sampling in multiscale simulation.
Comput. Phys. Commun.
Bertrand Rouet-Leduc, Kipton Barros, Emmanuel Cieren, Venmugil Elango, Christoph Junghans, Turab Lookman, Jamaludin Mohd-Yusof, Robert S. Pavel, Axel Y. Rivera, Dominic Roehm, Allen L. McPherson, Timothy C. Germann
2009 J jnl
369 Tflop/s molecular dynamics simulations on the petaflop hybrid supercomputer 'Roadrunner'.
Concurr. Comput. Pract. Exp.
Timothy C. Germann, Kai Kadau, Sriram Swaminarayan
2008 A conf
369 Tflop/s molecular dynamics simulations on the Roadrunner general-purpose heterogeneous supercomputer.
SC
Sriram Swaminarayan, Kai Kadau, Timothy C. Germann, Gordon C. Fossum
2008 J jnl
BlueGene/L applications: Parallelism On a Massive Scale.
Int. J. High Perform. Comput. Appl.
Bronis R. de Supinski, Martin Schulz, Vasily V. Bulatov, William H. Cabot, Bor Chan, Andrew W. Cook, Erik W. Draeger, James N. Glosli, Jeffrey A. Greenough, Keith W. Henderson, Alison Kubota, Steve Louis, Brian J. Miller, Mehul V. Patel, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Andy Yoo, George Almási, Gyan Bhanot, Alan Gara, John A. Gunnels, Manish Gupta, José E. Moreira, James C. Sexton, Robert Walkup, Charles Archer, François Gygi, Timothy C. Germann, Kai Kadau, Peter S. Lomdahl, Charles A. Rendleman, Michael L. Welcome, William McLendon, Bruce Hendrickson, Franz Franchetti, Stefan Kral, Juergen Lorenz, Christoph W. Überhuber, Edmond Chow, Ümit V. Çatalyürek
1999 J jnl
Recent advances in large-scale atomistic materials simulations.
Comput. Sci. Eng.
Timothy C. Germann, Peter S. Lomdahl