Tim Clark

46 papers Misc 1Journal 38Unranked 7
YearRankTypeTitle / Venue / Authors
2021 — conf
The FAIRSCAPE digital commons framework and Evidence Graphs for reproducibility (keynote).
DISCO@JCDL
Tim Clark
2020 J jnl
FAIR Data Reuse - the Path through Data Citation.
Data Intell.
Paul Groth, Helena Cousijn, Tim Clark, Carole A. Goble
2020 J jnl
Software and Data Citation.
Comput. Sci. Eng.
Daniel S. Katz, Neil P. Chue Hong, Tim Clark, Martin Fenner, Maryann E. Martone
2020 J jnl
Unique, Persistent, Resolvable: Identifiers as the Foundation of FAIR.
Data Intell.
Nick S. Juty, Sarala M. Wimalaratne, Stian Soiland-Reyes, John A. Kunze, Carole A. Goble, Tim Clark
2019 J jnl
Software Citation Implementation Challenges.
CoRR
Daniel S. Katz, Daina Bouquin, Neil P. Chue Hong, Jessica Hausman, Catherine Mary Jones, Daniel Chivvis, Tim Clark, Mercè Crosas, Stephan Druskat, Martin Fenner, Tom Gillespie, Alejandra N. González-Beltrán, Morane Gruenpeter, Ted Habermann, Robert Haines, Melissa Harrison, Edwin A. Henneken, Lorraine J. Hwang, Matthew B. Jones, Alastair A. Kelly, David N. Kennedy, Katrin Leinweber, Fernando Rios, Carly Robinson, Ilian T. Todorov, Mingfang Wu, Qian Zhang
2017 J jnl
Interoperability and FAIRness through a novel combination of Web technologies.
PeerJ Comput. Sci.
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Arnold Kuzniar, Anand K. Gavai, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
2017 J jnl
Interoperability and FAIRness through a novel combination of Web technologies.
PeerJ Prepr.
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Arnold Kuzniar, Anand K. Gavai, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
2016 J jnl
Interoperability and FAIRness through a novel combination of Web technologies.
PeerJ Prepr.
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
2015 J jnl
Achieving human and machine accessibility of cited data in scholarly publications.
PeerJ Comput. Sci.
Joan Starr, Eleni Castro, Mercè Crosas, Michel Dumontier, Robert R. Downs, Ruth E. Duerr, Laurel L. Haak, Melissa A. Haendel, Iván Herman, Simon Hodson, Joe Hourclé, John Ernest Kratz, Jennifer Lin, Lars Holm Nielsen, Amy Nurnberger, Stefan Pröll, Andreas Rauber, Simone Sacchi, Arthur P. Smith, Michael Taylor, Tim Clark
2015 J jnl
Achieving human and machine accessibility of cited data in scholarly publications.
PeerJ Prepr.
Joan Starr, Eleni Castro, Mercè Crosas, Michel Dumontier, Robert R. Downs, Ruth E. Duerr, Laurel L. Haak, Melissa A. Haendel, Iván Herman, Simon Hodson, Joe Hourclé, John Ernest Kratz, Jennifer Lin, Lars Holm Nielsen, Amy Nurnberger, Stefan Pröll, Andreas Rauber, Simone Sacchi, Arthur P. Smith, Michael Taylor, Tim Clark
2015 — conf
Feasibility of Information Interoperability in the Humanitarian Domain.
AAAI Spring Symposia
Tim Clark, Carsten Keßler, Hemant Purohit
2015 — conf
Formalizing Knowledge and Evidence about Potential Drug-drug Interactions.
BDM2I@ISWC
Jodi Schneider, Mathias Brochhausen, Samuel Rosko, Paolo Ciccarese, William R. Hogan, Daniel C. Malone, Yifan Ning, Tim Clark, Richard D. Boyce
2014 — conf
Annotopia: An Open Source Universal Annotation Server for Biomedical Research.
SWAT4LS
Paolo Ciccarese, Tim Clark
2014 J jnl
CiTO + SWAN: The web semantics of bibliographic records, citations, evidence and discourse relationships.
Semantic Web
Paolo Ciccarese, David M. Shotton, Silvio Peroni, Tim Clark
2014 J jnl
Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications.
J. Biomed. Semant.
Tim Clark, Paolo Ciccarese, Carole A. Goble
2014 J jnl
Next Generation Scientific Publishing and the Web of Data.
Semantic Web
Tim Clark
2014 J jnl
Pain Research Forum: application of scientific social media frameworks in neuroscience.
Frontiers Neuroinformatics
Sudeshna Das, Patricia G. Mccaffrey, Megan Talkington, Neil Andrews, Stephane Corlosquet, Adrian Ivinson, Tim Clark
2014 J jnl
Recent applications of web semantics in eLifeScience.
J. Web Semant.
Tim Clark, Marco Roos
2014 J jnl
Semantic Web repositories for genomics data using the eXframe platform.
J. Biomed. Semant.
Emily Merrill, Stephane Corlosquet, Paolo Ciccarese, Tim Clark, Sudeshna Das
2014 J jnl
Simulating "soft" electronics.
J. Cheminformatics
Tim Clark
2014 — conf
Using eXframe to Build Semantic Web Genomics Repositories.
SWAT4LS
Emily Merrill, Shannan J. Ho Sui, Stephane Corlosquet, Tim Clark, Sudeshna Das
2014 — conf
Using the Micropublications Ontology and the Open Annotation Data Model to Represent Evidence within a Drug-Drug Interaction Knowledge Base.
LISC@ISWC
Jodi Schneider, Paolo Ciccarese, Tim Clark, Richard D. Boyce
2013 J jnl
Micropublications: a Semantic Model for Claims, Evidence, Arguments and Annotations in Biomedical Communications
CoRR
Tim Clark, Paolo Ciccarese, Carole A. Goble
2013 J jnl
PAV ontology: Provenance, Authoring and Versioning
CoRR
Paolo Ciccarese, Stian Soiland-Reyes, Khalid Belhajjame, Alasdair J. G. Gray, Carole A. Goble, Tim Clark
2013 J jnl
PAV ontology: provenance, authoring and versioning.
J. Biomed. Semant.
Paolo Ciccarese, Stian Soiland-Reyes, Khalid Belhajjame, Alasdair J. G. Gray, Carole A. Goble, Tim Clark
2013 J jnl
Web Annotation as a First Class Object.
CoRR
Paolo Ciccarese, Stian Soiland-Reyes, Tim Clark
2013 J jnl
Web Annotation as a First-Class Object.
IEEE Internet Comput.
Paolo Ciccarese, Stian Soiland-Reyes, Tim Clark
2012 J jnl
A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework.
Database J. Biol. Databases Curation
Anita E. Bandrowski, Jonathan Cachat, Yuling Li, Hans-Michael Müller, Paul W. Sternberg, Paolo Ciccarese, Tim Clark, Luis N. Marenco, Rixin Wang, Vadim Astakhov, Jeffrey S. Grethe, Maryann E. Martone
2012 J jnl
Open semantic annotation of scientific publications using DOMEO.
J. Biomed. Semant.
Paolo Ciccarese, Marco Ocana, Tim Clark
2011 J jnl
An open annotation ontology for science on web 3.0.
J. Biomed. Semant.
Paolo Ciccarese, Marco Ocana, Leyla Jael García Castro, Sudeshna Das, Tim Clark
2011 J jnl
The Future of Research Communication (Dagstuhl Perspectives Workshop 11331).
Dagstuhl Reports
Tim Clark, Anita de Waard, Ivan Herman, Eduard H. Hovy
2011 J jnl
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.
J. Biomed. Semant.
Joanne S. Luciano, Bosse Andersson, Colin R. Batchelor, Olivier Bodenreider, Tim Clark, Christine K. Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter J. Kos, Julia Kozlovsky, Timothy Lebo, M. Scott Marshall, Jamie P. McCusker, Deborah L. McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L. Powers, Eric Prud'hommeaux, Matthias Samwald, Lynn M. Schriml, Peter J. Tonellato, Patricia L. Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier
2009 J jnl
Building biomedical web communities using a semantically aware content management system.
Briefings Bioinform.
Sudeshna Das, Lisa Girard, Tom Green, Louis Weitzman, Alister Lewis-Bowen, Tim Clark
2009 Misc conf
Produce and Consume Linked Data with Drupal!
ISWC
Stephane Corlosquet, Renaud Delbru, Tim Clark, Axel Polleres, Stefan Decker
2009 — conf
Scientific publications on Web 3.0.
ELPUB
Mark Goetz, Tim Clark, Sudeshna Das, Lisa Girard
2008 J jnl
The SWAN biomedical discourse ontology.
J. Biomed. Informatics
Paolo Ciccarese, Elizabeth Wu, Gwendolyn T. Wong, Marco Ocana, June Kinoshita, Alan Ruttenberg, Tim Clark
2007 J jnl
Advancing translational research with the Semantic Web.
BMC Bioinform.
Alan Ruttenberg, Tim Clark, William J. Bug, Matthias Samwald, Olivier Bodenreider, Helen Chen, Donald Doherty, Kerstin Forsberg, Yong Gao, Vipul Kashyap, June Kinoshita, Joanne Luciano, M. Scott Marshall, Chimezie Ogbuji, Jonathan Rees, Susie Stephens, Gwendolyn T. Wong, Elizabeth Wu, Davide Zaccagnini, Tonya Hongsermeier, Eric Neumann, Ivan Herman, Kei-Hoi Cheung
2007 J jnl
AlzPharm: integration of neurodegeneration data using RDF.
BMC Bioinform.
Hugo Y. K. Lam, Luis N. Marenco, Tim Clark, Yong Gao, June Kinoshita, Gordon M. Shepherd, Perry L. Miller, Elizabeth Wu, Gwendolyn T. Wong, Nian Liu, Chiquito J. Crasto, Thomas M. Morse, Susie Stephens, Kei-Hoi Cheung
2007 J jnl
Alzforum and SWAN: the present and future of scientific web communities.
Briefings Bioinform.
Tim Clark, June Kinoshita
2007 J jnl
Knowledge Integration in Biomedicine: Technology and Community.
Briefings Bioinform.
Tim Clark
2007 J jnl
Knowledge Integration in Biomedicine: Technology and Community.
Briefings Bioinform.
Tim Clark
2006 J jnl
SWAN: A distributed knowledge infrastructure for Alzheimer disease research.
J. Web Semant.
Yong Gao, June Kinoshita, Elizabeth Wu, Eric L. Miller, Ryan Lee, Andy Seaborne, Steve Cayzer, Tim Clark
2004 J jnl
Globally distributed object identification for biological knowledgebases.
Briefings Bioinform.
Tim Clark, Sean Martin, Ted Liefeld
2003 J jnl
Computational knowledge integration in biopharmaceutical research.
Briefings Bioinform.
David Ficenec, Mark Osborne, Joël R. Pradines, Daniel R. Richards, Ramon M. Felciano, Raymond J. Cho, Richard O. Chen, Ted Liefeld, James Owen, Alan Ruttenberg, Christian G. Reich, Joseph Horvath, Tim Clark
2003 J jnl
Editorial: Identity and Interoperability in Bioinformatics.
Briefings Bioinform.
Tim Clark
2000 J jnl
Virtual Private Networks with QoS.
Inf. Secur. J. A Glob. Perspect.
Tim Clark