Thomas Sauter

22 papers Journal 17Unranked 4
YearRankTypeTitle / Venue / Authors
2024 J jnl
Metabolic models predict fotemustine and the combination of eflornithine/rifamycin and adapalene/cannabidiol for the treatment of gliomas.
Briefings Bioinform.
Ali Kishk, Maria Pires Pacheco, Tony Heurtaux, Thomas Sauter
2024 J jnl
Model ensembling as a tool to form interpretable multi-omic predictors of cancer pharmacosensitivity.
Briefings Bioinform.
Sébastien De Landtsheer, Apurva Badkas, Dagmar Kulms, Thomas Sauter
2022 J jnl
Project-based learning course on metabolic network modelling in computational systems biology.
PLoS Comput. Biol.
Thomas Sauter, Tamara Bintener, Ali Kishk, Luana Presta, Tessy Prohaska, Daniel Guignard, Ni Zeng, Claudia Cipriani, Sundas Arshad, Thomas Pfau, Patricia Martins Conde, Maria Pires Pacheco
2021 J jnl
Topological network measures for drug repositioning.
Briefings Bioinform.
Apurva Badkas, Sébastien De Landtsheer, Thomas Sauter
2019 — conf
An Efficient Machine Learning Method to Solve Imbalanced Data in Metabolic Disease Prediction.
KSE
Vânia Cecchini, Thanh-Phuong Nguyen, Thomas Pfau, Sébastien De Landtsheer, Thomas Sauter
2019 — ch.
Towards the Integration of Metabolic Network Modelling and Machine Learning for the Routine Analysis of High-Throughput Patient Data.
Automated Reasoning for Systems Biology and Medicine
Maria Pires Pacheco, Tamara Bintener, Thomas Sauter
2017 J jnl
FALCON: a toolbox for the fast contextualization of logical networks.
Bioinform.
Sébastien De Landtsheer, Panuwat Trairatphisan, Philippe Lucarelli, Thomas Sauter
2016 J jnl
Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond.
Briefings Bioinform.
Thomas Pfau, Maria Pires Pacheco, Thomas Sauter
2014 J jnl
Fast Reconstruction of Compact Context-Specific Metabolic Network Models.
PLoS Comput. Biol.
Nikos Vlassis, Maria Pires Pacheco, Thomas Sauter
2014 J jnl
Identification of New IκBα Complexes by an Iterative Experimental and Mathematical Modeling Approach.
PLoS Comput. Biol.
Fabian Konrath, Johannes Witt, Thomas Sauter, Dagmar Kulms
2013 J jnl
Fast Reconstruction of Compact Context-Specific Metabolic Network Models
CoRR
Nikos Vlassis, Maria Pires Pacheco, Thomas Sauter
2012 J jnl
Probabilistic Model Checking of the PDGF Signaling Pathway.
Trans. Comp. Sys. Biology
Qixia Yuan, Panuwat Trairatphisan, Jun Pang, Sjouke Mauw, Monique Wiesinger, Thomas Sauter
2011 — conf
A Study of the PDGF Signaling Pathway with PRISM
CompMod
Qixia Yuan, Jun Pang, Sjouke Mauw, Panuwat Trairatphisan, Monique Wiesinger, Thomas Sauter
2011 J jnl
A systems biology approach to analyse leaf carbohydrate metabolism in Arabidopsis thaliana.
EURASIP J. Bioinform. Syst. Biol.
Sebastian Henkel, Thomas Nägele, Imke Hörmiller, Thomas Sauter, Oliver Sawodny, Michael Ederer, Arnd G. Heyer
2011 J jnl
Modeling time delay in the NFκB signaling pathway following low dose IL-1 stimulation.
EURASIP J. Bioinform. Syst. Biol.
Johannes Witt, Sandra Barisic, Oliver Sawodny, Michael Ederer, Dagmar Kulms, Thomas Sauter
2009 J jnl
Mechanism of PP2A-mediated IKKβ dephosphorylation: a systems biological approach.
BMC Syst. Biol.
Johannes Witt, Sandra Barisic, Eva Schumann, Frank Allgöwer, Oliver Sawodny, Thomas Sauter, Dagmar Kulms
2009 J jnl
ON/OFF and Beyond - A Boolean Model of Apoptosis.
PLoS Comput. Biol.
Rebekka Schlatter, Kathrin Schmich, Ima Avalos Vizcarra, Peter Scheurich, Thomas Sauter, Christoph Borner, Michael Ederer, Irmgard Merfort, Oliver Sawodny
2008 J jnl
Analyse der evolutiven Adaptation am Beispiel einer pyruvat-auxotrophen Escherichia coli-Mutante (Analysis of the Evolutive Adaptation of a Pyruvate-auxotrophic Escherichia coli Mutant).
Autom.
Ronny Feuer, Michael Ederer, Ernst Dieter Gilles, Georg A. Sprenger, Oliver Sawodny, Thomas Sauter
2006 J jnl
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks.
BMC Bioinform.
Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sauter, Boris N. Kholodenko, Ernst Dieter Gilles
2004 — conf
Praxisbericht: Horizontale und vertikale Integration am Beispiel des Aufragsmanagemenst bei der MCG der DaimlerChrysler AG.
GI Jahrestagung (2)
Rainer Schrapel, Thomas Sauter
2003 J jnl
An Approach for Dividing Models of Biological Reaction Networks into Functional Units.
Simul.
Michael Ederer, Thomas Sauter, Eric Bullinger, Ernst Dieter Gilles, Frank Allgöwer
2003 — conf
Towards Whole Cell "in Silico" Models for Cellular Systems: Model Set-up and Model Validation.
POSTA
Andreas Kremling, Katja Bettenbrock, Sophia Fischer, Martin Ginkel, Thomas Sauter, Ernst Dieter Gilles