Thierry Mora - RankMe

37 papers A* 2Journal 34Unranked 1

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Paraplume: A fast and accurate antibody paratope prediction method provides insights into repertoire-scale binding dynamics. PLoS Comput. Biol. Gabriel Athènes, Adam Woolfe, Thierry Mora, Aleksandra M. Walczak
2025	J	`jnl`	Learning predictive signatures of HLA type from T-cell repertoires. PLoS Comput. Biol. María Ruiz Ortega, Mikhail V. Pogorelyy, Anastasia A. Minervina, Paul G. Thomas, Thierry Mora, Aleksandra M. Walczak
2023	J	`jnl`	Bayesian estimation of the Kullback-Leibler divergence for categorical sytems using mixtures of Dirichlet priors. CoRR Francesco Camaglia, Ilya Nemenman, Thierry Mora, Aleksandra M. Walczak
2022	J	`jnl`	Disorder and the Neural Representation of Complex Odors. Frontiers Comput. Neurosci. Kamesh Krishnamurthy, Ann M. Hermundstad, Thierry Mora, Aleksandra M. Walczak, Vijay Balasubramanian
2022	A*	`conf`	Learning low-dimensional generalizable natural features from retina using a U-net. NeurIPS Siwei Wang, Benjamin Hoshal, Elizabeth de Laittre, Thierry Mora, Michael Berry, Stephanie E. Palmer
2022	J	`jnl`	Learning the statistics and landscape of somatic mutation-induced insertions and deletions in antibodies. PLoS Comput. Biol. Cosimo Lupo, Natanael Spisak, Aleksandra M. Walczak, Thierry Mora
2021	J	`jnl`	MINIMALIST: Mutual INformatIon Maximization for Amortized Likelihood Inference from Sampled Trajectories. CoRR Giulio Isacchini, Natanael Spisak, Armita Nourmohammad, Thierry Mora, Aleksandra M. Walczak
2021	J	`jnl`	Optimal prediction with resource constraints using the information bottleneck. PLoS Comput. Biol. Vedant Sachdeva, Thierry Mora, Aleksandra M. Walczak, Stephanie E. Palmer
2021	J	`jnl`	Probing T-cell response by sequence-based probabilistic modeling. PLoS Comput. Biol. Barbara Bravi, Vinod P. Balachandran, Benjamin D. Greenbaum, Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco
2021	J	`jnl`	The Connection between Discrete- and Continuous-Time Descriptions of Gaussian Continuous Processes. CoRR Federica Ferretti, Victor Chardès, Thierry Mora, Aleksandra M. Walczak, Irene Giardina
2020	A*	`conf`	A new inference approach for training shallow and deep generalized linear models of noisy interacting neurons. NeurIPS Gabriel Mahuas, Giulio Isacchini, Olivier Marre, Ulisse Ferrari, Thierry Mora
2020	J	`jnl`	A new inference approach for training shallow and deep generalized linear models of noisy interacting neurons. CoRR Gabriel Mahuas, Giulio Isacchini, Olivier Marre, Ulisse Ferrari, Thierry Mora
2020	J	`jnl`	Inferring the immune response from repertoire sequencing. PLoS Comput. Biol. Maximilian Puelma Touzel, Aleksandra M. Walczak, Thierry Mora
2020	J	`jnl`	Population variability in the generation and selection of T-cell repertoires. PLoS Comput. Biol. Zachary Sethna, Giulio Isacchini, Thomas Dupic, Thierry Mora, Aleksandra M. Walczak, Yuval Elhanati
2020	J	`jnl`	SOS: online probability estimation and generation of T-and B-cell receptors. Bioinform. Giulio Isacchini, Carlos Olivares, Armita Nourmohammad, Aleksandra M. Walczak, Thierry Mora
2019	J	`jnl`	Genesis of the αβ T-cell receptor. PLoS Comput. Biol. Thomas Dupic, Quentin Marcou, Aleksandra M. Walczak, Thierry Mora
2019	J	`jnl`	Modeling the Correlated Activity of Neural Populations: A Review. Neural Comput. Christophe Gardella, Olivier Marre, Thierry Mora
2019	J	`jnl`	OLGA: fast computation of generation probabilities of B- and T-cell receptor amino acid sequences and motifs. Bioinform. Zachary Sethna, Yuval Elhanati, Curtis G. Callan Jr., Aleksandra M. Walczak, Thierry Mora
2019	J	`jnl`	Size and structure of the sequence space of repeat proteins. PLoS Comput. Biol. Jacopo Marchi, Ezequiel A. Galpern, Rocío Espada, Diego U. Ferreiro, Aleksandra M. Walczak, Thierry Mora
2018	J	`jnl`	A Simple Model for Low Variability in Neural Spike Trains. Neural Comput. Ulisse Ferrari, Stéphane Deny, Olivier Marre, Thierry Mora
2018	J	`jnl`	Active degradation of MarA controls coordination of its downstream targets. PLoS Comput. Biol. Nicholas A. Rossi, Thierry Mora, Aleksandra M. Walczak, Mary J. Dunlop
2017	J	`jnl`	Inferring repeat-protein energetics from evolutionary information. PLoS Comput. Biol. Rocío Espada, R. Gonzalo Parra, Thierry Mora, Aleksandra M. Walczak, Diego U. Ferreiro
2017	J	`jnl`	Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires. PLoS Comput. Biol. Mikhail V. Pogorelyy, Yuval Elhanati, Quentin Marcou, Anastasiia L. Sycheva, Ekaterina Komech, Vadim I. Nazarov, Olga V. Britanova, Dmitry M. Chudakov, Ilgar Z. Mamedov, Yuri B. Lebedev, Thierry Mora, Aleksandra M. Walczak
2017	—	`conf`	Restricted Boltzmann Machines provide an accurate metric for retinal responses to visual stimuli. ICLR (Workshop) Christophe Gardella, Olivier Marre, Thierry Mora
2017	J	`jnl`	Variable habitat conditions drive species covariation in the human microbiota. PLoS Comput. Biol. Charles K. Fisher, Thierry Mora, Aleksandra M. Walczak
2016	J	`jnl`	repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data. Bioinform. Yuval Elhanati, Quentin Marcou, Thierry Mora, Aleksandra M. Walczak
2015	J	`jnl`	Capturing coevolutionary signals inrepeat proteins. BMC Bioinform. Rocío Espada, R. Gonzalo Parra, Thierry Mora, Aleksandra M. Walczak, Diego U. Ferreiro
2015	J	`jnl`	High Accuracy Decoding of Dynamical Motion from a Large Retinal Population. PLoS Comput. Biol. Olivier Marre, Vicente Botella-Soler, Kristina D. Simmons, Thierry Mora, Gasper Tkacik, Michael J. Berry II
2014	J	`jnl`	Flocking and turning: a new model for self-organized collective motion. CoRR Andrea Cavagna, Lorenzo Del Castello, Irene Giardina, Tomas Grigera, Asja Jelic, Stefania Melillo, Thierry Mora, Leonardo Parisi, Edmondo Silvestri, Massimiliano Viale, Aleksandra M. Walczak
2009	J	`jnl`	Steps in the Bacterial Flagellar Motor. PLoS Comput. Biol. Thierry Mora, Howard Yu, Yoshiyuki Sowa, Ned S. Wingreen
2008	J	`jnl`	Pairs of SAT-assignments in random Boolean formulæ. Theor. Comput. Sci. Hervé Daudé, Marc Mézard, Thierry Mora, Riccardo Zecchina
2007	J	`jnl`	Random subcubes as a toy model for constraint satisfaction problems CoRR Thierry Mora, Lenka Zdeborová
2006	J	`jnl`	Error Exponents of Low-Density Parity-Check Codes on the Binary Erasure Channel CoRR Thierry Mora, Olivier Rivoire
2006	J	`jnl`	Geometrical organization of solutions to random linear Boolean equations CoRR Thierry Mora, Marc Mézard
2006	J	`jnl`	Statistical mechanics of error exponents for error-correcting codes CoRR Thierry Mora, Olivier Rivoire
2005	J	`jnl`	Clustering of solutions in the random satisfiability problem CoRR Marc Mézard, Thierry Mora, Riccardo Zecchina
2005	J	`jnl`	Pairs of SAT Assignment in Random Boolean Formulae CoRR Hervé Daudé, Marc Mézard, Thierry Mora, Riccardo Zecchina