Theodore D. Satterthwaite

56 papers A* 1Journal 46Unranked 9

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	A software ecosystem for brain tractometry processing, analysis, and insight. PLoS Comput. Biol. John Kruper, Adam C. Richie-Halford, Joanna Qiao, Asa Gilmore, Kelly Chang, Mareike Grotheer, Ethan Roy, Sendy Caffarra, Teresa Gómez, Sam Chou, Matthew Cieslak, Serge Koudoro, Eleftherios Garyfallidis, Theodore D. Satterthwaite, Jason D. Yeatman, Ariel Rokem
2025	J	`jnl`	Concurrence: A dependence criterion for time series, applied to biological data. CoRR Evangelos Sariyanidi, John D. Herrington, Lisa Yankowitz, Pratik Chaudhari, Theodore D. Satterthwaite, Casey J. Zampella, Jeffrey S. Morris, Edward Gunning, Robert T. Schultz, Russell T. Shinohara, Birkan Tunç
2025	J	`jnl`	Corrigendum to "ALE meta-analyses of voxel-based morphometry studies: Parameter validation via large-scale simulations" [NeuroImage 281 (2023): 120383]. NeuroImage Lennart Frahm, Theodore D. Satterthwaite, Peter T. Fox, Robert Langner, Simon B. Eickhoff
2025	J	`jnl`	Resting fMRI-guided TMS evokes subgenual anterior cingulate response in depression. NeuroImage Romain J. Duprat, Kristin A. Linn, Theodore D. Satterthwaite, Yvette I. Sheline, Ximo Liang, Gabriela Bagdon, Matthew W. Flounders, Heather Robinson, Michael Platt, Joseph Kable, Hannah Long, Morgan Scully, Joseph A. Deluisi, Michael Thase, Mario Cristancho, Julie Grier, Camille Blaine, Almaris Figueroa-González, Desmond J. Oathes
2023	J	`jnl`	ALE meta-analyses of voxel-based morphometry studies: Parameter validation via large-scale simulations. NeuroImage Lennart Frahm, Theodore D. Satterthwaite, Peter T. Fox, Robert Langner, Simon B. Eickhoff
2023	J	`jnl`	Computing personalized brain functional networks from fMRI using self-supervised deep learning. Medical Image Anal. Hongming Li, Dhivya Srinivasan, Chuanjun Zhuo, Zaixu Cui, Raquel E. Gur, Ruben C. Gur, Desmond J. Oathes, Christos Davatzikos, Theodore D. Satterthwaite, Yong Fan
2023	J	`jnl`	Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization. NeuroImage Fengling Hu, Andrew A. Chen, Hannah Horng, Vishnu Bashyam, Christos Davatzikos, Aaron Alexander-Bloch, Mingyao Li, Haochang Shou, Theodore D. Satterthwaite, Meichen Yu, Russell T. Shinohara
2023	J	`jnl`	ModelArray: An R package for statistical analysis of fixel-wise data. NeuroImage Chenying Zhao, Tinashe M. Tapera, Joëlle Bagautdinova, Josiane Bourque, Sydney Covitz, Raquel E. Gur, Ruben C. Gur, Bart Larsen, Kahini Mehta, Steven L. Meisler, Kristin Murtha, John Muschelli, David R. Roalf, Valerie J. Sydnor, Alessandra M. Valcarcel, Russell T. Shinohara, Matthew Cieslak, Theodore D. Satterthwaite
2023	J	`jnl`	Multiscale functional connectivity patterns of the aging brain learned from harmonized rsfMRI data of the multi-cohort iSTAGING study. NeuroImage Zhen Zhou, Hongming Li, Dhivya Srinivasan, Ahmed Abdulkadir, Ilya M. Nasrallah, Junhao Wen, Jimit Doshi, Güray Erus, Elizabeth Mamourian, R. Nick Bryan, David A. Wolk, Lori L. Beason-Held, Susan M. Resnick, Theodore D. Satterthwaite, Christos Davatzikos, Haochang Shou, Yong Fan
2022	J	`jnl`	Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets. NeuroImage Sydney Covitz, Tinashe M. Tapera, Azeez Adebimpe, Aaron Alexander-Bloch, Maxwell A. Bertolero, Eric Feczko, Alexandre R. Franco, Raquel E. Gur, Ruben C. Gur, Timothy Hendrickson, Audrey Houghton, Kahini Mehta, Kristin Murtha, Anders Perrone, Tim Robert-Fitzgerald, Jenna M. Schabdach, Russell T. Shinohara, Jacob W. Vogel, Chenying Zhao, Damien A. Fair, Michael P. Milham, Matthew Cieslak, Theodore D. Satterthwaite
2022	J	`jnl`	Harmonizing functional connectivity reduces scanner effects in community detection. NeuroImage Andrew A. Chen, Dhivya Srinivasan, Raymond Pomponio, Yong Fan, Ilya M. Nasrallah, Susan M. Resnick, Lori L. Beason-Held, Christos Davatzikos, Theodore D. Satterthwaite, Dani S. Bassett, Russell T. Shinohara, Haochang Shou
2022	J	`jnl`	Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes. Medical Image Anal. Junhao Wen, Erdem Varol, Aristeidis Sotiras, Zhijian Yang, Ganesh B. Chand, Güray Erus, Haochang Shou, Ahmed Abdulkadir, Gyujoon Hwang, Dominic B. Dwyer, Alessandro Pigoni, Paola Dazzan, René S. Kahn, Hugo G. Schnack, Marcus V. Zanetti, Eva M. Meisenzahl, Geraldo Filho Bussato, Benedicto Crespo-Facorro, Rafael Romero-Garcia, Christos Pantelis, Stephen J. Wood, Chuanjun Zhuo, Russell T. Shinohara, Yong Fan, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Nikolaos Koutsouleris, Daniel H. Wolf, Christos Davatzikos
2022	J	`jnl`	Retinal ganglion cell endowment is correlated with optic tract fiber cross section, not density. NeuroImage Huseyin O. Taskin, Yuchuan Qiao, Valerie J. Sydnor, Matthew Cieslak, Edda B. Haggerty, Theodore D. Satterthwaite, Jessica I. W. Morgan, Yonggang Shi, Geoffrey Karl Aguirre
2022	J	`jnl`	Spatially-enhanced clusterwise inference for testing and localizing intermodal correspondence. NeuroImage Sara Weinstein, Simon N. Vandekar, Erica B. Baller, Danni Tu, Azeez Adebimpe, Tinashe M. Tapera, Ruben C. Gur, Raquel E. Gur, John A. Detre, Armin Raznahan, Aaron Alexander-Bloch, Theodore D. Satterthwaite, Russell T. Shinohara, Jun Young Park
2021	J	`jnl`	FlywheelTools: Data Curation and Manipulation on the Flywheel Platform. Frontiers Neuroinformatics Tinashe M. Tapera, Matthew Cieslak, Max Bertolero, Azeez Adebimpe, Geoffrey Karl Aguirre, Ellyn R. Butler, Philip A. Cook, Diego Davila, Mark A. Elliott, Sophia Linguiti, Kristin Murtha, William Tackett, John A. Detre, Theodore D. Satterthwaite
2021	J	`jnl`	Hierarchical Extraction of Functional Connectivity Components in Human Brain Using Resting-State fMRI. IEEE Trans. Medical Imaging Dushyant Sahoo, Theodore D. Satterthwaite, Christos Davatzikos
2020	A*	`conf`	Discovering Synchronized Subsets of Sequences: A Large Scale Solution. CVPR Evangelos Sariyanidi, Casey J. Zampella, G. Keith Bartley, John D. Herrington, Theodore D. Satterthwaite, Robert T. Schultz, Birkan Tunç
2020	J	`jnl`	Finding the needle in a high-dimensional haystack: Canonical correlation analysis for neuroscientists. NeuroImage Hao-Ting Wang, Jonathan Smallwood, Janaina Mourão Miranda, Cedric Huchuan Xia, Theodore D. Satterthwaite, Danielle S. Bassett, Danilo Bzdok
2020	J	`jnl`	Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan. NeuroImage Raymond Pomponio, Güray Erus, Mohamad Habes, Jimit Doshi, Dhivya Srinivasan, Elizabeth Mamourian, Vishnu Bashyam, Ilya M. Nasrallah, Theodore D. Satterthwaite, Yong Fan, Lenore J. Launer, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Christos Davatzikos
2020	J	`jnl`	Intensity warping for multisite MRI harmonization. NeuroImage Julia Wrobel, Melissa Lynne Martin, Rohit Bakshi, Peter A. Calabresi, M. Elliot, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Roland G. Henry, Govind Nair, Jiwon Oh, Nico Papinutto, Daniel Pelletier, Daniel S. Reich, W. D. Rooney, Theodore D. Satterthwaite, William Stern, Karthik Prabhakaran, Jeff Goldsmith
2020	J	`jnl`	Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging. CoRR Vishnu M. Bashyam, Jimit Doshi, Güray Erus, Dhivya Srinivasan, Ahmed Abdulkadir, Mohamad Habes, Yong Fan, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Theodore D. Satterthwaite, Daniel H. Wolf, Raquel E. Gur, Ruben C. Gur, John C. Morris, Marilyn S. Albert, Hans Jörgen Grabe, Susan M. Resnick, R. Nick Bryan, David A. Wolk, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos
2019	J	`jnl`	Sex differences in network controllability as a predictor of executive function in youth. NeuroImage Eli J. Cornblath, Evelyn Tang, Graham L. Baum, Tyler M. Moore, Azeez Adebimpe, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Fabio Pasqualetti, Theodore D. Satterthwaite, Danielle S. Bassett
2019	J	`jnl`	System-level matching of structural and functional connectomes in the human brain. NeuroImage Yusuf Osmanlioglu, Birkan Tunç, Drew Parker, Mark A. Elliott, Graham L. Baum, Rastko Ciric, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Ragini Verma
2018	J	`jnl`	Brain Age Prediction Based on Resting-State Functional Connectivity Patterns Using Convolutional Neural Networks. CoRR Hongming Li, Theodore D. Satterthwaite, Yong Fan
2018	—	`conf`	Brain age prediction based on resting-state functional connectivity patterns using convolutional neural networks. ISBI Hongming Li, Theodore D. Satterthwaite, Yong Fan
2018	J	`jnl`	Brain state expression and transitions are related to complex executive cognition in normative neurodevelopment. NeuroImage John D. Medaglia, Theodore D. Satterthwaite, Apoorva Kelkar, Rastko Ciric, Tyler M. Moore, Kosha Ruparel, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett
2018	J	`jnl`	Brain state flexibility accompanies motor-skill acquisition. NeuroImage Pranav G. Reddy, Marcelo Gomes Mattar, Andrew C. Murphy, Nicholas F. Wymbs, Scott T. Grafton, Theodore D. Satterthwaite, Danielle S. Bassett
2018	J	`jnl`	Finding the needle in high-dimensional haystack: A tutorial on canonical correlation analysis. CoRR Hao-Ting Wang, Jonathan Smallwood, Janaina Mourão Miranda, Cedric Huchuan Xia, Theodore D. Satterthwaite, Danielle S. Bassett, Danilo Bzdok
2018	—	`conf`	MIMoSA: An Approach to Automatically Segment T2 Hyperintense and T1 Hypointense Lesions in Multiple Sclerosis. BrainLes@MICCAI (1) Alessandra M. Valcarcel, Kristin A. Linn, Fariha Khalid, Simon N. Vandekar, Shahamat Tauhid, Theodore D. Satterthwaite, John Muschelli, Rohit Bakshi, Russell T. Shinohara
2018	J	`jnl`	On testing for spatial correspondence between maps of human brain structure and function. NeuroImage Aaron Alexander-Bloch, Haochang Shou, Siyuan Liu, Theodore D. Satterthwaite, David C. Glahn, Russell T. Shinohara, Simon N. Vandekar, Armin Raznahan
2018	J	`jnl`	Quantitative assessment of structural image quality. NeuroImage Adon F. G. Rosen, David R. Roalf, Kosha Ruparel, Jason Blake, Kevin Seelaus, Lakshmi P. Villa, Rastko Ciric, Philip A. Cook, Christos Davatzikos, Mark A. Elliott, Angel Garcia de La Garza, Efstathios D. Gennatas, Megan Quarmley, J. Eric Schmitt, Russell T. Shinohara, M. Dylan Tisdall, R. Cameron Craddock, Raquel E. Gur, Theodore D. Satterthwaite
2018	J	`jnl`	Sex differences in network controllability as a predictor of executive function in youth. CoRR Eli J. Cornblath, Evelyn Tang, Graham L. Baum, Tyler M. Moore, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Fabio Pasqualetti, Theodore D. Satterthwaite, Danielle S. Bassett
2018	J	`jnl`	The impact of in-scanner head motion on structural connectivity derived from diffusion MRI. NeuroImage Graham L. Baum, David R. Roalf, Philip A. Cook, Rastko Ciric, Adon F. G. Rosen, Cedric Xia, Mark A. Elliott, Kosha Ruparel, Ragini Verma, Birkan Tunç, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett, Theodore D. Satterthwaite
2017	J	`jnl`	Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity. NeuroImage Rastko Ciric, Daniel H. Wolf, Jonathan D. Power, David R. Roalf, Graham L. Baum, Kosha Ruparel, Russell T. Shinohara, Mark A. Elliott, Simon B. Eickhoff, Christos Davatzikos, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett, Theodore D. Satterthwaite
2017	J	`jnl`	Harmonization of multi-site diffusion tensor imaging data. NeuroImage Jean-Philippe Fortin, Drew Parker, Birkan Tunç, Takanori Watanabe, Mark A. Elliott, Kosha Ruparel, David R. Roalf, Theodore D. Satterthwaite, Ruben C. Gur, Raquel E. Gur, Robert T. Schultz, Ragini Verma, Russell T. Shinohara
2017	J	`jnl`	Large-scale sparse functional networks from resting state fMRI. NeuroImage Hongming Li, Theodore D. Satterthwaite, Yong Fan
2016	J	`jnl`	Control-group feature normalization for multivariate pattern analysis of structural MRI data using the support vector machine. NeuroImage Kristin A. Linn, Bilwaj Gaonkar, Theodore D. Satterthwaite, Jimit Doshi, Christos Davatzikos, Russell T. Shinohara
2016	J	`jnl`	MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection. NeuroImage Jimit Doshi, Güray Erus, Yangming Ou, Susan M. Resnick, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Susan Furth, Christos Davatzikos
2016	J	`jnl`	Subject-level measurement of local cortical coupling. NeuroImage Simon N. Vandekar, Russell T. Shinohara, Armin Raznahan, Ryan Hopson, David R. Roalf, Kosha Ruparel, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite
2016	J	`jnl`	The Philadelphia Neurodevelopmental Cohort: A publicly available resource for the study of normal and abnormal brain development in youth. NeuroImage Theodore D. Satterthwaite, John J. Connolly, Kosha Ruparel, Monica E. Calkins, Chad Jackson, Mark A. Elliott, David R. Roalf, Karthik Prabhakaran, Ryan Hopson, Meckenzie Behr, Haijun Qiu, Frank D. Mentch, Rosetta Chiavacci, Patrick Sleiman, Ruben C. Gur, Hakon Hakonarson, Raquel E. Gur
2016	J	`jnl`	The impact of quality assurance assessment on diffusion tensor imaging outcomes in a large-scale population-based cohort. NeuroImage David R. Roalf, Megan Quarmley, Mark A. Elliott, Theodore D. Satterthwaite, Simon N. Vandekar, Kosha Ruparel, Efstathios D. Gennatas, Monica E. Calkins, Tyler M. Moore, Ryan Hopson, Karthik Prabhakaran, Chad Jackson, Ragini Verma, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur
2015	J	`jnl`	GraSP: Geodesic Graph-based Segmentation with Shape Priors for the functional parcellation of the cortex. NeuroImage Nicolas Honnorat, Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos
2015	J	`jnl`	Identifying Sparse Connectivity Patterns in the brain using resting-state fMRI. NeuroImage Harini Eavani, Theodore D. Satterthwaite, Roman Filipovych, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos
2014	—	`conf`	Discriminative Sparse Connectivity Patterns for Classification of fMRI Data. MICCAI (3) Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos
2014	J	`jnl`	Neuroimaging of the Philadelphia Neurodevelopmental Cohort. NeuroImage Theodore D. Satterthwaite, Mark A. Elliott, Kosha Ruparel, James Loughead, Karthik Prabhakaran, Monica E. Calkins, Ryan Hopson, Chad Jackson, Jack Keefe, Marisa Riley, Frank D. Mentch, Patrick Sleiman, Ragini Verma, Christos Davatzikos, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur
2013	—	`conf`	A Graph-Based Brain Parcellation Method Extracting Sparse Networks. PRNI Nicolas Honnorat, Harini Eavani, Theodore D. Satterthwaite, Christos Davatzikos
2013	J	`jnl`	An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data. NeuroImage Theodore D. Satterthwaite, Mark A. Elliott, Raphael T. Gerraty, Kosha Ruparel, James Loughead, Monica E. Calkins, Simon B. Eickhoff, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur, Daniel H. Wolf
2013	J	`jnl`	Heterogeneous impact of motion on fundamental patterns of developmental changes in functional connectivity during youth. NeuroImage Theodore D. Satterthwaite, Daniel H. Wolf, Kosha Ruparel, Güray Erus, Mark A. Elliott, Simon B. Eickhoff, Efstathios D. Gennatas, Chad Jackson, Karthik Prabhakaran, Alex R. Smith, Hakon Hakonarson, Ragini Verma, Christos Davatzikos, Raquel E. Gur, Ruben C. Gur
2013	—	`conf`	Identifying patterns in temporal variation of functional connectivity using resting state FMRI. ISBI Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos
2013	—	`conf`	ODVBA-C: Optimally-Discriminative Voxel-Based Analysis of Continuous Variables. PRNI Tianhao Zhang, Theodore D. Satterthwaite, Christos Davatzikos
2013	—	`conf`	Unsupervised Learning of Functional Network Dynamics in Resting State fMRI. IPMI Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos
2012	J	`jnl`	Being right is its own reward: Load and performance related ventral striatum activation to correct responses during a working memory task in youth. NeuroImage Theodore D. Satterthwaite, Kosha Ruparel, James Loughead, Mark A. Elliott, Raphael T. Gerraty, Monica E. Calkins, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur, Daniel H. Wolf
2012	J	`jnl`	Impact of in-scanner head motion on multiple measures of functional connectivity: Relevance for studies of neurodevelopment in youth. NeuroImage Theodore D. Satterthwaite, Daniel H. Wolf, James Loughead, Kosha Ruparel, Mark A. Elliott, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur
2012	—	`conf`	Multivariate fMRI Analysis Using Optimally-discriminative Voxel-based Analysis. PRNI Tianhao Zhang, Theodore D. Satterthwaite, Mark A. Elliott, Ruben C. Gur, Raquel E. Gur, Christos Davatzikos
2012	—	`conf`	Sparse Dictionary Learning of Resting State fMRI Networks. PRNI Harini Eavani, Roman Filipovych, Christos Davatzikos, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur
2007	J	`jnl`	Dissociable but inter-related systems of cognitive control and reward during decision making: Evidence from pupillometry and event-related fMRI. NeuroImage Theodore D. Satterthwaite, Leonard Green, Joel Myerson, Jamie Parker, Mohana Ramaratnam, Randy L. Buckner