Tavis K. Anderson

14 papers Journal 12Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
Ordered Leaf Attachment (OLA) Vectors can Identify Reticulation Events even in Multifurcated Trees.
CoRR
Alexey Markin, Tavis K. Anderson
2025 J jnl
Phylo-rs: an extensible phylogenetic analysis library in rust.
BMC Bioinform.
Sriram Vijendran, Tavis K. Anderson, Alexey Markin, Oliver Eulenstein
2024 J jnl
Asymmetric Cluster-Based Measures for Comparative Phylogenetics.
J. Comput. Biol.
Sanket Wagle, Alexey Markin, Pawel Górecki, Tavis K. Anderson, Oliver Eulenstein
2023 J jnl
Phylogenetic diversity statistics for all clades in a phylogeny.
Bioinform.
Siddhant Grover, Alexey Markin, Tavis K. Anderson, Oliver Eulenstein
2023 — conf
The Asymmetric Cluster Affinity Cost.
RECOMB-CG
Sanket Wagle, Alexey Markin, Pawel Górecki, Tavis K. Anderson, Oliver Eulenstein
2022 J jnl
RF-Net 2: fast inference of virus reassortment and hybridization networks.
Bioinform.
Alexey Markin, Sanket Wagle, Tavis K. Anderson, Oliver Eulenstein
2022 J jnl
smot: a python package and CLI tool for contextual phylogenetic subsampling.
J. Open Source Softw.
Zebulun W. Arendsee, Amy L. Vincent Baker, Tavis K. Anderson
2021 J jnl
Consensus of All Solutions for Intractable Phylogenetic Tree Inference.
IEEE ACM Trans. Comput. Biol. Bioinform.
Pawel Tabaszewski, Pawel Górecki, Alexey Markin, Tavis K. Anderson, Oliver Eulenstein
2021 J jnl
The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine.
Database J. Biol. Databases Curation
Tavis K. Anderson, Blake Inderski, Diego G. Diel, Benjamin M. Hause, Elizabeth G. Porter, Travis Clement, Eric A. Nelson, Jianfa Bai, Jane Christopher-Hennings, Phillip C. Gauger, Jianqiang Zhang, Karen M. Harmon, Rodger Main, Kelly Lager, Kay Faaberg
2021 J jnl
Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases.
Briefings Bioinform.
Margaret Staton, Ethalinda Cannon, Lacey-Anne Sanderson, Jill L. Wegrzyn, Tavis K. Anderson, Sean Buehler, Irene Cobo-Simón, Kay Faaberg, Emily S. Grau, Valentin Guignon, Jessica Gunoskey, Blake Inderski, Sook Jung, Kelly Lager, Dorrie Main, Monica Poelchau, Risharde Ramnath, Peter Richter, Joe West, Stephen P. Ficklin
2019 — conf
Robinson-Foulds Reticulation Networks.
BCB
Alexey Markin, Tavis K. Anderson, Venkata Sai Krishna Teja Vadali, Oliver Eulenstein
2018 J jnl
ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine.
BMC Bioinform.
Michael A. Zeller, Tavis K. Anderson, Rasna W Walia, Amy L. Vincent, Phillip C. Gauger
2017 J jnl
Influenza Research Database: An integrated bioinformatics resource for influenza virus research.
Nucleic Acids Res.
Yun Zhang, Brian D. Aevermann, Tavis K. Anderson, David F. Burke, Gwenaelle Dauphin, Zhiping Gu, Sherry He, Sanjeev Kumar, Christopher N. Larsen, Alexandra J. Lee, Xiaomei Li, Catherine Macken, Colin Mahaffey, Brett E. Pickett, Brian Reardon, Thomas Smith, Lucy Stewart, Christian Suloway, Guangyu Sun, Lei Tong, Amy L. Vincent, Bryan Walters, Sam Zaremba, Hongtao Zhao, Liwei Zhou, Christian M. Zmasek, Edward B. Klem, Richard H. Scheuermann
2012 J jnl
Ranking viruses: measures of positional importance within networks define core viruses for rational polyvalent vaccine development.
Bioinform.
Tavis K. Anderson, William W. Laegreid, Francesco Cerutti, Fernando A. Osorio, Eric A. Nelson, Jane Christopher-Hennings, Tony L. Goldberg