Tao Zeng

37 papers C 1Journal 25Unranked 11
YearRankTypeTitle / Venue / Authors
2023 J jnl
Editorial: Expert opinions in integrative bioinformatics: 2022.
Frontiers Bioinform.
Tao Zeng, Chuanchao Zhang
2023 J jnl
Latent space search based multimodal optimization with personalized edge-network biomarker for multi-purpose early disease prediction.
Briefings Bioinform.
Jing Liang, Zong-Wei Li, Ze-Ning Sun, Ying Bi, Han Cheng, Tao Zeng, Weifeng Guo
2022 J jnl
Deep latent space fusion for adaptive representation of heterogeneous multi-omics data.
Briefings Bioinform.
Chengming Zhang, Yabin Chen, Tao Zeng, Chuanchao Zhang, Luonan Chen
2022 J jnl
Vec2image: an explainable artificial intelligence model for the feature representation and classification of high-dimensional biological data by vector-to-image conversion.
Briefings Bioinform.
Hui Tang, Xiangtian Yu, Rui Liu, Tao Zeng
2021 J jnl
Performance assessment of sample-specific network control methods for bulk and single-cell biological data analysis.
PLoS Comput. Biol.
Weifeng Guo, Xiangtian Yu, Qianqian Shi, Jing Liang, Shao-Wu Zhang, Tao Zeng
2020 J jnl
Disease Cluster Detection and Functional Characterization.
IEEE Access
Wei Guo, Tao Zeng, Tao Huang, Yu-Dong Cai
2020 — conf
Efficient Mining Closed k-Mers from DNA and Protein Sequences.
BigComp
Jingsong Zhang, Cheng Bi, Yinglin Wang, Tao Zeng, Bo Liao, Luonan Chen
2020 J jnl
Efficient Mining Multi-Mers in a Variety of Biological Sequences.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jingsong Zhang, Jianmei Guo, Ming Zhang, Xiangtian Yu, Xiaoqing Yu, Weifeng Guo, Tao Zeng, Luonan Chen
2020 J jnl
Identification of Key Genes for the Ultrahigh Yield of Rice Using Dynamic Cross-tissue Network Analysis.
Genom. Proteom. Bioinform.
Jihong Hu, Tao Zeng, Qiongmei Xia, Liyu Huang, Yesheng Zhang, Chuanchao Zhang, Yan Zeng, Hui Liu, Shilai Zhang, Guangfu Huang, Wenting Wan, Yi Ding, Fengyi Hu, Congdang Yang, Luonan Chen, Wen Wang
2020 J jnl
Identifying Essential Methylation Patterns and Genes Associated With Stroke.
IEEE Access
Xiangtian Yu, Zijun Gan, Yan Xu, Sibao Wan, Min Li, Shijian Ding, Tao Zeng
2020 J jnl
Network control principles for identifying personalized driver genes in cancer.
Briefings Bioinform.
Weifeng Guo, Shaowu Zhang, Tao Zeng, Tatsuya Akutsu, Luonan Chen
2020 J jnl
Screening Dys-Methylation Genes and Rules for Cancer Diagnosis by Using the Pan-Cancer Study.
IEEE Access
Yu-Hang Zhang, Tao Zeng, Xiaoyong Pan, Wei Guo, Zijun Gan, Yunhua Zhang, Tao Huang, Yu-Dong Cai
2019 J jnl
A novel network control model for identifying personalized driver genes in cancer.
PLoS Comput. Biol.
Weifeng Guo, Shao-Wu Zhang, Tao Zeng, Yan Li, Jianxi Gao, Luonan Chen
2019 J jnl
Dynamically characterizing individual clinical change by the steady state of disease-associated pathway.
BMC Bioinform.
Shaoyan Sun, Xiangtian Yu, Fengnan Sun, Ying Tang, Juan Zhao, Tao Zeng
2019 J jnl
Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells.
IEEE Access
Lei Chen, Xiaoyong Pan, Tao Zeng, Yu-Hang Zhang, Tao Huang, Yu-Dong Cai
2018 — conf
Characterizing and Discriminating Individual Steady State of Disease-Associated Pathway.
ICIC (1)
Shaoyan Sun, Xiangtian Yu, Fengnan Sun, Ying Tang, Juan Zhao, Tao Zeng
2018 J jnl
Discovering personalized driver mutation profiles of single samples in cancer by network control strategy.
Bioinform.
Weifeng Guo, Shao-Wu Zhang, Li-Li Liu, Fei Liu, Qianqian Shi, Lei Zhang, Ying Tang, Tao Zeng, Luonan Chen
2017 J jnl
Comparative network stratification analysis for identifying functional interpretable network biomarkers.
BMC Bioinform.
Chuanchao Zhang, Juan Liu, Qianqian Shi, Tao Zeng, Luonan Chen
2017 J jnl
Differential function analysis: identifying structure and activation variations in dysregulated pathways.
Sci. China Inf. Sci.
Chuanchao Zhang, Juan Liu, Qianqian Shi, Tao Zeng, Luonan Chen
2017 — conf
Mining K-mers of Various Lengths in Biological Sequences.
ISBRA
Jingsong Zhang, Jianmei Guo, Xiaoqing Yu, Xiangtian Yu, Weifeng Guo, Tao Zeng, Luonan Chen
2017 J jnl
Pattern fusion analysis by adaptive alignment of multiple heterogeneous omics data.
Bioinform.
Qianqian Shi, Chuanchao Zhang, Minrui Peng, Xiangtian Yu, Tao Zeng, Juan Liu, Luonan Chen
2016 J jnl
Big-data-based edge biomarkers: study on dynamical drug sensitivity and resistance in individuals.
Briefings Bioinform.
Tao Zeng, Wanwei Zhang, Xiangtian Yu, Xiaoping Liu, Meiyi Li, Luonan Chen
2016 — conf
Integration of multiple heterogeneous omics data.
BIBM
Chuanchao Zhang, Juan Liu, Qianqian Shi, Xiangtian Yu, Tao Zeng, Luonan Chen
2015 — conf
Identification of phenotypic networks based on whole transcriptome by comparative network decomposition.
BIBM
Chuanchao Zhang, Juan Liu, Qianqian Shi, Tao Zeng, Luonan Chen
2015 J jnl
Inferring Sequential Order of Somatic Mutations during Tumorgenesis based on Markov Chain Model.
IEEE ACM Trans. Comput. Biol. Bioinform.
Hao Kang, Kwang-Hyun Cho, Xiaohua Douglas Zhang, Tao Zeng, Luonan Chen
2014 — conf
Detecting Phosphorylation Determined Active Protein Interaction Network during Cancer Development by Robust Network Component Analysis.
DTMBIO@CIKM
Tao Zeng, Ziming Wang, Luonan Chen
2014 J jnl
Detecting tissue-specific early warning signals for complex diseases based on dynamical network biomarkers: study of type 2 diabetes by cross-tissue analysis.
Briefings Bioinform.
Meiyi Li, Tao Zeng, Rui Liu, Luonan Chen
2014 — conf
MMSE: A generalized coherence measure for identifying linear patterns.
BIBM
Shuhua Chen, Juan Liu, Tao Zeng
2014 J jnl
Negative correlation based gene markers identification in integrative gene expression data.
Int. J. Data Min. Bioinform.
Tao Zeng, Xuan Guo, Juan Liu
2012 J jnl
Correction: Tracing dynamic biological processes during phase transition.
BMC Syst. Biol.
Tao Zeng, Luonan Chen
2012 — conf
Module network rewiring in response to therapy.
ISB
Tao Zeng, Ruozhao Wang, Luonan Chen
2012 J jnl
Tracing dynamic biological processes during phase transition.
BMC Syst. Biol.
Tao Zeng, Luonan Chen
2011 — conf
Prediction of Heme Binding Sites in Heme Proteins Using an Integrative Sequence Profile Coupling Evolutionary Information with Physicochemical Properties.
BIBM
Yi Xiong, Wen Zhang, Tao Zeng, Juan Liu
2010 — conf
Discovering negative correlated gene sets from integrative gene expression data for cancer prognosis.
BIBM
Tao Zeng, Xuan Guo, Juan Liu
2010 J jnl
Mixture classification model based on clinical markers for breast cancer prognosis.
Artif. Intell. Medicine
Tao Zeng, Juan Liu
2009 — conf
Biological Pathway Conducting Microarray-Based Cancer Classification.
BMEI
Tao Zeng, Fei Luo, Juan Liu
2007 C conf
Analysis on Time-lagged Gene Clusters in Time Series Gene Expression Data.
CIS
Tao Zeng, Juan Liu