Tanja Kortemme

13 papers A 1Journal 12
YearRankTypeTitle / Venue / Authors
2024 J jnl
An integrative approach to protein sequence design through multiobjective optimization.
PLoS Comput. Biol.
Lu Hong, Tanja Kortemme
2022 J jnl
Advances in the Computational Design of Small-Molecule-Controlled Protein-Based Circuits for Synthetic Biology.
Proc. IEEE
Simon Kretschmer, Tanja Kortemme
2021 J jnl
De novo protein fold families expand the designable ligand binding site space.
PLoS Comput. Biol.
Xingjie Pan, Tanja Kortemme
2020 J jnl
Better together: Elements of successful scientific software development in a distributed collaborative community.
PLoS Comput. Biol.
Julia Koehler Leman, Brian D. Weitzner, P. Douglas Renfrew, Steven M. Lewis, Rocco Moretti, Andrew M. Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W. Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William R. Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland L. Dunbrack Jr., Tanja Kortemme, Andrew Leaver-Fay, Charlie E. M. Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J. Gray, Richard Bonneau
2020 J jnl
New computational protein design methods for de novo small molecule binding sites.
PLoS Comput. Biol.
James E. Lucas, Tanja Kortemme
2015 J jnl
Coupling Protein Side-Chain and Backbone Flexibility Improves the Re-design of Protein-Ligand Specificity.
PLoS Comput. Biol.
Noah Ollikainen, René M. de Jong, Tanja Kortemme
2013 J jnl
Computational Protein Design Quantifies Structural Constraints on Amino Acid Covariation.
PLoS Comput. Biol.
Noah Ollikainen, Tanja Kortemme
2012 J jnl
Global landscape of HIV-human protein complexes.
Nat.
Stefanie Jäger, Peter Cimermancic, Natali Gulbahce, Jeffrey R. Johnson, Kathryn E. McGovern, Starlynn C. Clarke, Michael Shales, Gaelle Mercenne, Lars Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, Eyal Akiva, John Marlett, Melanie Stephens, Iván D'Orso, Jason Fernandes, Marie E. Fahey, Cathal Mahon, Anthony J. O'Donoghue, Aleksandar Todorovic, John H. Morris, David A. Maltby, Tom Alber, Gerard Cagney, Frederic D. Bushman, John A. Young, Sumit K. Chanda, Wesley I. Sundquist, Tanja Kortemme, Ryan D. Hernandez, Charles S. Craik, Alma Burlingame, Andrej Sali, Alan D. Frankel, Nevan J. Krogan
2012 J jnl
Prediction of Mutational Tolerance in HIV-1 Protease and Reverse Transcriptase Using Flexible Backbone Protein Design.
PLoS Comput. Biol.
Elisabeth Humphris-Narayanan, Eyal Akiva, Rocco Varela, Shane Ó Conchúir, Tanja Kortemme
2010 J jnl
RosettaBackrub - a web server for flexible backbone protein structure modeling and design.
Nucleic Acids Res.
Florian Lauck, Colin A. Smith, Gregory F. Friedland, Elisabeth L. Humphris, Tanja Kortemme
2009 J jnl
A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family.
PLoS Comput. Biol.
Gregory D. Friedland, Nils-Alexander Lakomek, Christian Griesinger, Jens Meiler, Tanja Kortemme
2009 A conf
SAT-based protein design.
ICCAD
Noah Ollikainen, Ellen Sentovich, Carlos Coelho, Andreas Kuehlmann, Tanja Kortemme
2007 J jnl
Design of Multi-Specificity in Protein Interfaces.
PLoS Comput. Biol.
Elisabeth L. Humphris, Tanja Kortemme