Takuto Koyama - RankMe

12 papers Journal 7Unranked 5

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Chemical genomics language model toward reliable and explainable compound-protein interaction exploration. J. Cheminformatics Takuto Koyama, Hayato Tsumura, Ryunosuke Okita, Kimihiro Yamazaki, Aki Hasegawa, Keiko Imamura, Takashi Kato, Hiroaki Iwata, Ryosuke Kojima, Haruhisa Inoue, Shigeyuki Matsumoto, Yasushi Okuno
2026	J	`jnl`	Empowering federated learning for robust compound-protein interaction prediction across heterogeneous cross-pharma domains. J. Cheminformatics Takuto Koyama, Hiroaki Iwata, Ryosuke Kojima, Takao Otsuka, Aki Hasegawa, Seungeon Lee, Hiroshi Ueda, Toshiharu Morimoto, Ryoko Sasaki, Nao Torimoto, Sei Murakami, Manabu Tojo, Teruki Honma, Shigeyuki Matsumoto, Yasushi Okuno
2025	—	`conf`	Accelerating Drug Discovery through Semantic Data Integration and Machine Learning: From Biomedical Knowledge Graphs to Predictive Models. ISWC (Industry/Doctoral Consortium/Posters/Demos) Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Takuto Koyama, Mayumi Kamada, Yuki Moriya
2025	J	`jnl`	HELM-BERT: A Transformer for Medium-sized Peptide Property Prediction. CoRR Seungeon Lee, Takuto Koyama, Itsuki Maeda, Shigeyuki Matsumoto, Yasushi Okuno
2025	J	`jnl`	Improving ADME Prediction with Multitask Graph Neural Networks and Assessing Explainability in Lead Optimization. J. Chem. Inf. Model. Shoma Ito, Takuto Koyama, Shigeyuki Matsumoto, Ryosuke Kojima, Yuji Okamoto, Masataka Kuroda, Hitoshi Kawashima, Reiko Watanabe, Tomoki Yonezawa, Takaaki Sumiyoshi, Kazuyoshi Ikeda, Kenji Mizuguchi, Hiroaki Iwata, Yasushi Okuno
2025	J	`jnl`	kMoL: an open-source machine and federated learning library for drug discovery. J. Cheminformatics Romeo Cozac, Haris Hasic, Jun Jin Choong, Vincent Richard, Loic Beheshti, Cyrille Froehlich, Takuto Koyama, Shigeyuki Matsumoto, Ryosuke Kojima, Hiroaki Iwata, Aki Hasegawa, Takao Otsuka, Yasushi Okuno
2023	J	`jnl`	Improving Compound-Protein Interaction Prediction by Self-Training with Augmenting Negative Samples. J. Chem. Inf. Model. Takuto Koyama, Shigeyuki Matsumoto, Hiroaki Iwata, Ryosuke Kojima, Yasushi Okuno
2023	J	`jnl`	VGAE-MCTS: A New Molecular Generative Model Combining the Variational Graph Auto-Encoder and Monte Carlo Tree Search. J. Chem. Inf. Model. Hiroaki Iwata, Taichi Nakai, Takuto Koyama, Shigeyuki Matsumoto, Ryosuke Kojima, Yasushi Okuno
2022	—	`conf`	Optical beam control for aerial transmission based on laser profile simulation. SICE Takuto Koyama, Hiroshi Koga, Kota Watanabe, Kiyotaka Izumi, Takeshi Tsujimura
2022	—	`conf`	Robotic Alignment Technique of Search Control for Laser Beam Communication. SICE Kota Watanabe, Takuto Koyama, Hiroshi Koga, Kiyotaka Izumi, Takeshi Tsujimura
2022	—	`conf`	Tactical Alignment of Aerial Transmission Laser Beam for Free Space Optics Communication. NBiS Kota Watanabe, Takuto Koyama, Hiroshi Koga, Kiyotaka Izumi, Takeshi Tsujimura
2021	—	`conf`	Optical Simulations on Aerial Transmitting Laser Beam for Free Space Optics Communication. NBiS Shun Jono, Takuto Koyama, Kota Watanabe, Kiyotaka Izumi, Takeshi Tsujimura