Taijiao Jiang

37 papers Journal 32Unranked 5
YearRankTypeTitle / Venue / Authors
2026 J jnl
Knowledge from medical ontology can significantly enhance mainstream text embedding models in medical information retrieval.
Inf. Process. Manag.
Lizong Deng, Luming Chen, Mi Liu, Xuan Wang, Yifan Qi, Chunli Shao, Taijiao Jiang
2025 J jnl
PREDAC-FluB: predicting antigenic clusters of seasonal influenza B viruses with protein language model embedding based convolutional neural network.
Briefings Bioinform.
Wenping Xie, Jingze Liu, Chuan Wang, Jiangyuan Wang, Wenjie Han, Yousong Peng, Xiangjun Du, Jing Meng, Kang Ning, Taijiao Jiang
2025 J jnl
PhenoAlign: A Hybrid Data-Knowledge-Driven Approach for Precisely Aligning Phenotype Information in Medical Texts.
IEEE J. Biomed. Health Informatics
Tao Yang, Luming Chen, Lizong Deng, Taijiao Jiang
2025 J jnl
TransSSVs: a Transformer-based deep learning model for accurate detection of somatic small variants in paired tumor and normal sequencing data.
Appl. Intell.
Jing Meng, Jiangyuan Wang, Jingze Liu, Wenkai Song, Ming Li, Aiping Wu, Taijiao Jiang
2024 J jnl
PREDAC-CNN: predicting antigenic clusters of seasonal influenza A viruses with convolutional neural network.
Briefings Bioinform.
Jing Meng, Jingze Liu, Wenkai Song, Honglei Li, Jiangyuan Wang, Le Zhang, Yousong Peng, Aiping Wu, Taijiao Jiang
2023 J jnl
Ribocentre: a database of ribozymes.
Nucleic Acids Res.
Jie Deng, Yaohuang Shi, Xuemei Peng, Yuanlin He, Xiaoxue Chen, Mengxiao Li, Xiaowei Lin, WenJian Liao, Yuanyin Huang, Taijiao Jiang, David M. J. Lilley, Zhichao Miao, Lin Huang
2023 J jnl
TeaBERT: An Efficient Knowledge Infused Cross-Lingual Language Model for Mapping Chinese Medical Entities to the Unified Medical Language System.
IEEE J. Biomed. Health Informatics
Luming Chen, Yifan Qi, Aiping Wu, Lizong Deng, Taijiao Jiang
2022 J jnl
An atlas of human viruses provides new insights into diversity and tissue tropism of human viruses.
Bioinform.
Sifan Ye, Congyu Lu, Ye Qiu, Heping Zheng, Xingyi Ge, Aiping Wu, Zanxian Xia, Taijiao Jiang, Haizhen Zhu, Yousong Peng
2022 — conf
Enhancing Cross-lingual Medical Concept Alignment by Leveraging Synonyms and Translations of the Unified Medical Language System.
HPCC/DSS/SmartCity/DependSys
Luming Chen, Yifan Qi, Aiping Wu, Lizong Deng, Taijiao Jiang
2022 J jnl
PIAT: An Evolutionarily Intelligent System for Deep Phenotyping of Chinese Electronic Health Records.
IEEE J. Biomed. Health Informatics
Lizong Deng, Xu Zhang, Tao Yang, Mi Liu, Luming Chen, Taijiao Jiang
2022 J jnl
vsRNAfinder: a novel method for identifying high-confidence viral small RNAs from small RNA-Seq data.
Briefings Bioinform.
Zena Cai, Ping Fu, Ye Qiu, Aiping Wu, Gaihua Zhang, Yirong Wang, Taijiao Jiang, Xing-Yi Ge, Haizhen Zhu, Yousong Peng
2021 J jnl
Classification and characterization of multigene family proteins of African swine fever viruses.
Briefings Bioinform.
Zhaozhong Zhu, Huiting Chen, Li Liu, Yang Cao, Taijiao Jiang, Yuanqiang Zou, Yousong Peng
2021 J jnl
Co-mutation modules capture the evolution and transmission patterns of SARS-CoV-2.
Briefings Bioinform.
Luyao Qin, Xiao Ding, Yongjie Li, Qingfeng Chen, Jing Meng, Taijiao Jiang
2021 J jnl
Comparative viromes of
Briefings Bioinform.
Lin Liu, Qin Shen, Nan Li, Yuwen He, Na Han, Xianyue Wang, Jinxin Meng, Yousong Peng, Mei Pan, Yuting Jin, Taijiao Jiang, Wenjie Tan, Jinglin Wang, Aiping Wu
2021 J jnl
Compositional diversity and evolutionary pattern of coronavirus accessory proteins.
Briefings Bioinform.
Jingzhe Shang, Na Han, Ziyi Chen, Yousong Peng, Liang Li, Hangyu Zhou, Chengyang Ji, Jing Meng, Taijiao Jiang, Aiping Wu
2021 J jnl
DeepSSV: detecting somatic small variants in paired tumor and normal sequencing data with convolutional neural network.
Briefings Bioinform.
Jing Meng, Brandon Victor, Zhen He, Hongde Liu, Taijiao Jiang
2021 J jnl
Identification and characterization of circRNAs encoded by MERS-CoV, SARS-CoV-1 and SARS-CoV-2.
Briefings Bioinform.
Zena Cai, Congyu Lu, Jun He, Li Liu, Yuanqiang Zou, Zheng Zhang, Zhaozhong Zhu, Xingyi Ge, Aiping Wu, Taijiao Jiang, Heping Zheng, Yousong Peng
2021 J jnl
VirusCircBase: a database of virus circular RNAs.
Briefings Bioinform.
Zena Cai, Yunshi Fan, Zheng Zhang, Congyu Lu, Zhaozhong Zhu, Taijiao Jiang, Tongling Shan, Yousong Peng
2020 J jnl
FluPhenotype - a one-stop platform for early warnings of the influenza A virus.
Bioinform.
Congyu Lu, Zena Cai, Yuanqiang Zou, Zheng Zhang, Wenjun Chen, Lizong Deng, Xiangjun Du, Aiping Wu, Lei Yang, Dayan Wang, Yuelong Shu, Taijiao Jiang, Yousong Peng
2020 J jnl
FluReassort: a database for the study of genomic reassortments among influenza viruses.
Briefings Bioinform.
Xiao Ding, Xuye Yuan, Longfei Mao, Aiping Wu, Taijiao Jiang
2020 J jnl
LATTE: A knowledge-based method to normalize various expressions of laboratory test results in free text of Chinese electronic health records.
J. Biomed. Informatics
Kun Jiang, Tao Yang, Chunyan Wu, Luming Chen, Longfei Mao, Yongyou Wu, Lizong Deng, Taijiao Jiang
2020 J jnl
Phage protein receptors have multiple interaction partners and high expressions.
Bioinform.
Zheng Zhang, Fen Yu, Yuanqiang Zou, Ye Qiu, Aiping Wu, Taijiao Jiang, Yousong Peng
2019 J jnl
Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors.
Bioinform.
Zheng Zhang, Zhaozhong Zhu, Wenjun Chen, Zena Cai, Beibei Xu, Zhiying Tan, Aiping Wu, Xingyi Ge, Xinhong Guo, Zhongyang Tan, Zanxian Xia, Haizhen Zhu, Taijiao Jiang, Yousong Peng
2018 — conf
Multiple Visual Fields Cascaded Convolutional Neural Network for Breast Cancer Detection.
PRICAI (1)
Haomiao Ni, Hong Liu, Zichao Guo, Xiangdong Wang, Taijiao Jiang, Kuansong Wang, Yueliang Qian
2017 — conf
Predicting the Antigenic Variant of Human Influenza A(H3N2) Virus with a Stacked Auto-Encoder Model.
ICPCSEE (2)
Zhiying Tan, Beibei Xu, Kenli Li, Taijiao Jiang, Yousong Peng
2017 — conf
Prediction of Cell Specific O-GalNAc Glycosylation in Human.
ICPCSEE (2)
Yuanqiang Zou, Kenli Li, Taijiao Jiang, Yousong Peng
2017 J jnl
cooccurNet: an R package for co-occurrence network construction and analysis.
Bioinform.
Yuanqiang Zou, Zhiqiang Wu, Lizong Deng, Aiping Wu, Fan Wu, Kenli Li, Taijiao Jiang, Yousong Peng
2016 J jnl
A novel index of protein-protein interface propensity improves interface residue recognition.
BMC Syst. Biol.
Wentao Dai, Aiping Wu, Liang-Xiao Ma, Yi-Xue Li, Taijiao Jiang, Yuan-Yuan Li
2016 J jnl
PREDAC-H3: a user-friendly platform for antigenic surveillance of human influenza a(H3N2) virus based on hemagglutinin sequences.
Bioinform.
Yousong Peng, Lei Yang, Honglei Li, Yuanqiang Zou, Lizong Deng, Aiping Wu, Xiangjun Du, Dayan Wang, Yuelong Shu, Taijiao Jiang
2015 — conf
Prediction of influenza epidemics at the province level in China using search query from "Haosou".
FSKD
Yuanqiang Zou, Yousong Peng, Li Lu, Taijiao Jiang, Lizong Deng
2014 J jnl
Exploring protein domain organization by recognition of secondary structure packing interfaces.
Bioinform.
Lizong Deng, Aiping Wu, Wentao Dai, Tingrui Song, Ya Cui, Taijiao Jiang
2011 J jnl
Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation.
Bioinform.
Yang Cao, Lin Song, Zhichao Miao, Yun Hu, Liqing Tian, Taijiao Jiang
2011 J jnl
NCACO-score: An effective main-chain dependent scoring function for structure modeling.
BMC Bioinform.
Liqing Tian, Aiping Wu, Yang Cao, Xiaoxi Dong, Yun Hu, Taijiao Jiang
2011 J jnl
RASP: rapid modeling of protein side chain conformations.
Bioinform.
Zhichao Miao, Yang Cao, Taijiao Jiang
2010 J jnl
Correlation of Influenza Virus Excess Mortality with Antigenic Variation: Application to Rapid Estimation of Influenza Mortality Burden.
PLoS Comput. Biol.
Aiping Wu, Yousong Peng, Xiangjun Du, Yuelong Shu, Taijiao Jiang
2006 J jnl
Paircoil2: improved prediction of coiled coils from sequence.
Bioinform.
A. V. McDonnell, Taijiao Jiang, Amy E. Keating, Bonnie Berger
2005 J jnl
AVID: An integrative framework for discovering functional relationships among proteins.
BMC Bioinform.
Taijiao Jiang, Amy E. Keating