Sylvia K. Plevritis

18 papers Misc 1Journal 14Unranked 3
YearRankTypeTitle / Venue / Authors
2022 — conf
A Dataset Generation Framework for Evaluating Megapixel Image Classifiers and Their Explanations.
ECCV (12)
Gautam Machiraju, Sylvia K. Plevritis, Parag Mallick
2022 J jnl
Visualization, benchmarking and characterization of nested single-cell heterogeneity as dynamic forest mixtures.
Briefings Bioinform.
Benedict Anchang, Raul Mendez-Giraldez, Xiaojiang Xu, Trevor K. Archer, Qing Chen, Guang Hu, Sylvia K. Plevritis, Alison Anne Motsinger-Reif, Jian-Liang Li
2021 J jnl
Reflecting on 20 years of breast cancer modeling in CISNET: Recommendations for future cancer systems modeling efforts.
PLoS Comput. Biol.
Amy Trentham-Dietz, Oguzhan Alagöz, Christina Chapman, Xuelin Huang, Jinani Jayasekera, Nicolien T. van Ravesteyn, Sandra J. Lee, Clyde B. Schechter, Jennifer M. Yeh, Sylvia K. Plevritis, Jeanne S. Mandelblatt, Breast Working Group of the Cancer Intervention, Surveillance Modeling Network (CISNET)
2019 J jnl
Sparse discriminative latent characteristics for predicting cancer drug sensitivity from genomic features.
PLoS Comput. Biol.
David A. Knowles, Gina Bouchard, Sylvia K. Plevritis
2019 J jnl
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
Nat.
Michael P. Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rozenblatt-Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A. Nystrom, Jonathan C. Silverstein, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L. Roy, Ajay Pillai, Marishka Brown, Zorina S. Galis, Long Cai, Cole Trapnell, Dana Jackson, Garry P. Nolan, William James Greenleaf, Sylvia K. Plevritis, Sara Ahadi, Stephanie A. Nevins, Hayan Lee, Christian Martijn Schuerch, Sarah Black, Vishal Gautham Venkataraaman, Ed Esplin, Aaron Horning, Amir Bahmani, Xin Sun, Sanjay Jain, James S. Hagood, Gloria Pryhuber, Peter V. Kharchenko, Bernd Bodenmiller, Todd Brusko, Michael Clare-Salzler, Harry Nick, Kevin Otto, Clive Wasserfall, Marda Jorgensen, Maigan Brusko, Sergio Maffioletti, Richard M. Caprioli, Jeffrey M. Spraggins, Danielle Gutierrez, Nathan Heath Patterson, Elizabeth K. Neumann, Raymond Harris, Mark P. de Caestecker, Agnes B. Fogo, Raf Van de Plas, Ken Lau, Guo-Cheng Yuan, Qian Zhu, Ruben Dries, Peng Yin, Sinem K. Saka, Jocelyn Y. Kishi, Yu Wang, Isabel Goldaracena, Dong Hye Ye, Kristin E. Burnum-Johnson, Paul D. Piehowski, Charles Ansong, Ying Zhu, Tushar Desai, Jay Mulye, Peter Chou, Monica Nagendran, Sarah A. Teichmann, Benedict Paten, Robert F. Murphy, Jian Ma, Vladimir Yu. Kiselev, Carl Kingsford, Allyson Ricarte, Maria Keays, Sushma Anand Akoju, Matthew Ruffalo, Margaret Vella, Chuck McCallum, Leonard E. Cross, Samuel H. Friedman, Randy W. Heiland, Bruce William Herr II, Paul Macklin, Ellen M. Quardokus, Lisel Record, James P. Sluka, Griffin M. Weber, Philip D. Blood, Alexander Ropelewski, William Shirey, Robin M. Scibek, Paula M. Mabee, W. Christopher Lenhardt, Kimberly Robasky, Stavros Michailidis, John C. Marioni, Andrew Butler, Tim Stuart, Eyal Fisher, Shila Ghazanfar, Gökcen Eraslan, Tommaso Biancalani, Eeshit D. Vaishnav, Pothur Srinivas, Aaron Pawlyk, Salvatore Sechi, Elizabeth L. Wilder, James Anderson
2014 J jnl
CCAST: A Model-Based Gating Strategy to Isolate Homogeneous Subpopulations in a Heterogeneous Population of Single Cells.
PLoS Comput. Biol.
Benedict Anchang, Mary T. Do, Xi Zhao, Sylvia K. Plevritis
2013 Misc conf
Identifying Master Regulators of Cancer and Their Downstream Targets by Integrating Genomic and Epigenomic Features.
Pacific Symposium on Biocomputing
Olivier Gevaert, Sylvia K. Plevritis
2013 J jnl
TreeVis: A MATLAB-based tool for tree visualization.
Comput. Methods Programs Biomed.
Peng Qiu, Sylvia K. Plevritis
2012 J jnl
CytoSPADE: high-performance analysis and visualization of high-dimensional cytometry data.
Bioinform.
Michael D. Linderman, Zach Bjornson, Erin F. Simonds, Peng Qiu, Robert V. Bruggner, Ketaki Sheode, Teresa H. Meng, Sylvia K. Plevritis, Garry P. Nolan
2011 J jnl
Discovering Biological Progression Underlying Microarray Samples.
PLoS Comput. Biol.
Peng Qiu, Andrew J. Gentles, Sylvia K. Plevritis
2011 J jnl
Reconstructing Directed Signed Gene Regulatory Network From Microarray Data.
IEEE Trans. Biomed. Eng.
Peng Qiu, Sylvia K. Plevritis
2010 J jnl
MiDReG: A method of mining developmentally regulated genes using Boolean implications.
Proc. Natl. Acad. Sci. USA
Debashis Sahoo, Jun Seita, Deepta Bhattacharya, Matthew A. Inlay, Irving L. Weissman, Sylvia K. Plevritis, David L. Dill
2010 J jnl
Reducing the Computational Complexity of Information Theoretic Approaches for Reconstructing Gene Regulatory Networks.
J. Comput. Biol.
Peng Qiu, Andrew J. Gentles, Sylvia K. Plevritis
2009 J jnl
Fast calculation of pairwise mutual information for gene regulatory network reconstruction.
Comput. Methods Programs Biomed.
Peng Qiu, Andrew J. Gentles, Sylvia K. Plevritis
2009 J jnl
Simultaneous Class Discovery and Classification of Microarray Data Using Spectral Analysis.
J. Comput. Biol.
Peng Qiu, Sylvia K. Plevritis
2008 — conf
A modified Dirichlet process mixture model for clustering phosphopeptides based on their response to anti-cancer drug perturbation.
BIOCOMP
Babak Shahbaba, Eva Prenosil, Anjali Jain, Sylvia K. Plevritis
1995 J jnl
Spectral extrapolation of spatially bounded images [MRI application].
IEEE Trans. Medical Imaging
Sylvia K. Plevritis, Albert Macovski
1994 — conf
Alternative K-Space Sampling Distributions for MR Spectrososcopic Imaging.
ICIP (3)
Sylvia K. Plevritis, Albert Macovski