Sverker Holmgren

44 papers A 2B 2C 1Misc 2Journal 21Unranked 16

Year	Rank	Type	Title / Venue / Authors
2017	J	`jnl`	A Flexible Computational Framework Using R and Map-Reduce for Permutation Tests of Massive Genetic Analysis of Complex Traits. IEEE ACM Trans. Comput. Biol. Bioinform. Behrang Mahjani, Salman Zubair Toor, Carl Nettelblad, Sverker Holmgren
2017	—	`conf`	Multidimensional Performance and Scalability Analysis for Diverse Applications Based on System Monitoring Data. PPAM (1) Maya G. Neytcheva, Sverker Holmgren, Jonathan R. Bull, Ali Dorostkar, Anastasia Kruchinina, Dmitry A. Nikitenko, Nina Popova, Pavel A. Shvets, Alexey M. Teplov, Vadim V. Voevodin, Vladimir V. Voevodin
2014	J	`jnl`	Dynamic Autotuning of Adaptive Fast Multipole Methods on Hybrid Multicore CPU and GPU Systems. SIAM J. Sci. Comput. Marcus Holm, Stefan Engblom, Anders Goude, Sverker Holmgren
2014	C	`conf`	Impact of Code Refactoring Using Object-Oriented Methodology on a Scientific Computing Application. SCAM Malin Källén, Sverker Holmgren, Ebba Þóra Hvannberg
2013	J	`jnl`	Dynamic autotuning of adaptive fast multipole methods on hybrid multicore CPU \& GPU systems. CoRR Marcus Holm, Stefan Engblom, Anders Goude, Sverker Holmgren
2013	J	`jnl`	Fast and Accurate Detection of Multiple Quantitative Trait Loci. J. Comput. Biol. Carl Nettelblad, Behrang Mahjani, Sverker Holmgren
2013	J	`jnl`	Preface. Future Gener. Comput. Syst. Erwin Laure, Sverker Holmgren
2013	B	`conf`	Scientific Analysis by Queries in Extended SPARQL over a Scalable e-Science Data Store. e-Science Andrej Andrejev, Salman Zubair Toor, Andreas Hellander, Sverker Holmgren, Tore Risch
2012	—	`conf`	Abstractions for Scaling eScience Applications to Distributed Computing Environments - A StratUm Integration Case Study in Molecular Systems Biology. BIOINFORMATICS Per-Olov Östberg, Andreas Hellander, Brian Drawert, Erik Elmroth, Sverker Holmgren, Linda R. Petzold
2012	—	`conf`	Investigating an Open Source Cloud Storage Infrastructure for CERN-specific Data Analysis. NAS Salman Zubair Toor, Rainer Töebbicke, Maitane Zotes Resines, Sverker Holmgren
2012	B	`conf`	Reducing Complexity in Management of eScience Computations. CCGRID Per-Olov Östberg, Andreas Hellander, Brian Drawert, Erik Elmroth, Sverker Holmgren, Linda R. Petzold
2011	—	`conf`	A Scalable Architecture for e-Science Data Management. eScience Salman Zubair Toor, Manivasakan Sabesan, Sverker Holmgren, Tore Risch
2011	J	`jnl`	Global error control of the time-propagation for the Schrödinger equation with a time-dependent Hamiltonian. J. Comput. Sci. Katharina Kormann, Sverker Holmgren, Hans O. Karlsson
2011	—	`conf`	Using Hardware Transactional Memory for High-Performance Computing. IPDPS Workshops Karl Ljungkvist, Martin Tillenius, David Black-Schaffer, Sverker Holmgren, Martin Karlsson, Elisabeth Larsson
2010	J	`jnl`	A Fourier-Coefficient Based Solution of an Optimal Control Problem in Quantum Chemistry. J. Optim. Theory Appl. Katharina Kormann, Sverker Holmgren, Hans O. Karlsson
2010	—	`conf`	A Grid-Enabled Problem Solving Environment for QTL Analysis in R. BICoB Mahen Jayawardena, Carl Nettelblad, Salman Zubair Toor, Per-Olov Östberg, Erik Elmroth, Sverker Holmgren
2010	J	`jnl`	Assessing a multiple QTL search using the variance component model. Comput. Biol. Chem. Kateryna Mishchenko, Lars Rönnegård, Sverker Holmgren, Volodymyr Mishchenko
2010	—	`conf`	Communication-Efficient Algorithms for Numerical Quantum Dynamics. PARA (2) Magnus Gustafsson, Katharina Kormann, Sverker Holmgren
2010	—	`conf`	Efficiently Implementing Monte Carlo Electrostatics Simulations on Multicore Accelerators. PARA (2) Marcus Holm, Sverker Holmgren
2009	J	`jnl`	Reconsidering algorithms for iterative solvers in the multicore era. Int. J. Comput. Sci. Eng. Dan Wallin, Henrik Löf, Erik Hagersten, Sverker Holmgren
2009	—	`conf`	cnF2freq: Efficient Determination of Genotype and Haplotype Probabilities in Outbred Populations Using Markov Models. BICoB Carl Nettelblad, Sverker Holmgren, Lucy Crooks, Örjan Carlborg
2008	J	`jnl`	Newton-type methods for REML estimation in genetic analysis of quantitative traits. J. Comput. Methods Sci. Eng. Kateryna Mishchenko, Sverker Holmgren, Lars Rönnegård
2007	J	`jnl`	Discrete Fundamental Solution Preconditioning for Hyperbolic Systems of PDE. J. Sci. Comput. Henrik Brandén, Sverker Holmgren, Per Sundqvist
2007	J	`jnl`	Dynamic Data Migration for Structured AMR Solvers. Int. J. Parallel Program. Markus Nordén, Henrik Löf, Jarmo Rantakokko, Sverker Holmgren
2007	—	`conf`	Grid-Enabling an Efficient Algorithm for Demanding Global Optimization Problems in Genetic Analysis. eScience Mahen Jayawardena, Sverker Holmgren
2006	—	`conf`	Bioinformatics and Computational Biology: Minisymposium Abstract. PARA Ann-Charlotte Berglund Sonnhammer, Sverker Holmgren
2006	—	`conf`	Geographical Locality and Dynamic Data Migration for OpenMP Implementations of Adaptive PDE Solvers. IWOMP Markus Nordén, Henrik Löf, Jarmo Rantakokko, Sverker Holmgren
2006	A	`conf`	Multigrid and Gauss-Seidel smoothers revisited: parallelization on chip multiprocessors. ICS Dan Wallin, Henrik Löf, Erik Hagersten, Sverker Holmgren
2006	J	`jnl`	OpenMP versus MPI for PDE solvers based on regular sparse numerical operators. Future Gener. Comput. Syst. Markus Nordén, Sverker Holmgren, Michael Thuné
2006	—	`conf`	Using Parallel Computing and Grid Systems for Genetic Mapping of Quantitative Traits. PARA Mahen Jayawardena, Kajsa Ljungberg, Sverker Holmgren
2005	A	`conf`	affinity-on-next-touch: increasing the performance of an industrial PDE solver on a cc-NUMA system. ICS Henrik Löf, Sverker Holmgren
2004	—	`conf`	Analyzing Advanced PDE Solvers Through Simulation. PARA Henrik Johansson, Dan Wallin, Sverker Holmgren
2004	Misc	`conf`	Improving Geographical Locality of Data for Shared Memory Implementations of PDE Solvers. International Conference on Computational Science Henrik Löf, Markus Nordén, Sverker Holmgren
2004	J	`jnl`	Simultaneous search for multiple QTL using the global optimization algorithm DIRECT. Bioinform. Kajsa Ljungberg, Sverker Holmgren, Örjan Carlborg
2003	—	`conf`	Cache Memory Behavior of Advanced PDE Solvers. PARCO Dan Wallin, Henrik Johansson, Sverker Holmgren
2003	J	`jnl`	The Swedish National Graduate School in Scientific Computing (NGSSC). Future Gener. Comput. Syst. Sverker Holmgren, Anders Ynnerman
2002	J	`jnl`	Efficient Algorithms for Quantitative Trait Loci Mapping Problems. J. Comput. Biol. Kajsa Ljungberg, Sverker Holmgren, Örjan Carlborg
2002	Misc	`conf`	OpenMP versus MPI for PDE Solvers Based on Regular Sparse Numerical Operators. International Conference on Computational Science (3) Markus Nordén, Sverker Holmgren, Michael Thuné
2002	J	`jnl`	Performance of PDE solvers on a self-optimizing NUMA architecture. Parallel Algorithms Appl. Sverker Holmgren, Markus Nordén, Jarmo Rantakokko, Dan Wallin
2001	—	`conf`	Performance of High-Accuracy PDE Solvers on a Self-Optimizing NUMA Architecture. Euro-Par Sverker Holmgren, Dan Wallin
1999	J	`jnl`	Convergence Acceleration for Hyperbolic Systems Using Semicirculant Approximations. J. Sci. Comput. Henrik Brandén, Sverker Holmgren
1999	J	`jnl`	Convergence Acceleration for the Linearized Navier-Stokes Equations using Semicirculant Approximations. SIAM J. Sci. Comput. Sverker Holmgren, Henrik Brandén, Erik Sterner
1996	J	`jnl`	Semicirculant Solvers and Boundary Corrections for First-Order Partial Differential Equations. SIAM J. Sci. Comput. Sverker Holmgren, Kurt Otto
1994	J	`jnl`	Semicirculant Preconditioners for First-Order Partial Differential Equations. SIAM J. Sci. Comput. Sverker Holmgren, Kurt Otto