Suzanne S. Sindi

18 papers B 1Journal 15Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
Enhancing generalizability of model discovery across parameter space with multi-experiment equation learning (ME-EQL).
CoRR
Maria-Veronica Ciocanel, John T. Nardini, Kevin B. Flores, Erica M. Rutter, Suzanne S. Sindi, Alexandria Volkening
2024 J jnl
A new look at TFPI inhibition of factor X activation.
PLoS Comput. Biol.
Fabian Santiago, Amandeep Kaur, Shannon Bride, Dougald Monroe, Karin Leiderman, Suzanne S. Sindi
2024 — conf
Sparse Negative Binomial Signal Recovery for Genomic Variant Prediction in Diploid Species.
EMBC
Jocelyn Ornelas Munoz, Erica M. Rutter, Mario Banuelos, Suzanne S. Sindi, Roummel F. Marcia
2023 J jnl
Inferring gene regulatory networks using transcriptional profiles as dynamical attractors.
PLoS Comput. Biol.
Ruihao Li, Jordan C. Rozum, Morgan M. Quail, Mohammad N. Qasim, Suzanne S. Sindi, Clarissa J. Nobile, Réka Albert, Aaron D. Hernday
2022 J jnl
A structured model and likelihood approach to estimate yeast prion propagon replication rates and their asymmetric transmission.
PLoS Comput. Biol.
Fabian Santiago, Suzanne S. Sindi
2022 J jnl
Conservative finite volume method on deforming geometries: The case of protein aggregation in dividing yeast cells.
J. Comput. Phys.
Abbas-Ali Heydari, Suzanne S. Sindi, Maxime Theillard
2022 J jnl
N-ACT: An Interpretable Deep Learning Model for Automatic Cell Type and Salient Gene Identification.
CoRR
Abbas-Ali Heydari, Oscar A. Davalos, Katrina K. Hoyer, Suzanne S. Sindi
2020 J jnl
A unifying model for the propagation of prion proteins in yeast brings insight into the [PSI+] prion.
PLoS Comput. Biol.
Paul Lemarre, Laurent Pujo-Menjouet, Suzanne S. Sindi
2016 J jnl
On analytical and numerical approaches to division and label structured population models.
Appl. Math. Lett.
H. T. Banks, Kevin B. Flores, Suzanne S. Sindi
2015 J jnl
A study in nucleated polymerization models of protein aggregation.
Appl. Math. Lett.
Jason K. Davis, Suzanne S. Sindi
2014 J jnl
A Crump-Mode-Jagers Branching Process Model of Prion Loss in Yeast.
J. Appl. Probab.
Peter Olofsson, Suzanne S. Sindi
2014 J jnl
Characterization of structural variants with single molecule and hybrid sequencing approaches.
Bioinform.
Anna M. Ritz, Ali Bashir, Suzanne S. Sindi, David Hsu, Iman Hajirasouliha, Benjamin J. Raphael
2012 J jnl
Identification of polymorphic inversions from genotypes.
BMC Bioinform.
Alejandro Cáceres, Suzanne S. Sindi, Benjamin J. Raphael, Mario Cáceres, Juan R. González
2011 — conf
Workshop: Characterization of structural variants with next generation DNA sequencing.
ICCABS
Benjamin J. Raphael, Suzanne S. Sindi, Anna M. Ritz, Ali Bashir
2010 J jnl
Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data.
J. Comput. Biol.
Suzanne S. Sindi, Benjamin J. Raphael
2009 J jnl
A geometric approach for classification and comparison of structural variants.
Bioinform.
Suzanne S. Sindi, Elena Helman, Ali Bashir, Benjamin J. Raphael
2009 B conf
Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data.
RECOMB
Suzanne S. Sindi, Benjamin J. Raphael
2007 J jnl
Handbook of Computational Molecular Biology: Edited by Srinivas Aluru.
Briefings Bioinform.
Suzanne S. Sindi