Sunkyu Kim

18 papers Journal 17Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII - Task 3 competition.
Database J. Biol. Databases Curation
Davy Weissenbacher, Xinwei Zhao, Jessica R. C. Priestley, Katherine M. Szigety, Sarah F. Schmidt, Karen O'Connor, Ekin Soysal, Kirk Roberts, Jiewei Qi, Ling Luo, Zhihao Yang, Hongfei Lin, Hajung Kim, Chanhwi Kim, Jiwoong Sohn, Tim Beck, Marek Rei, Sunkyu Kim, T. Ian Simpson, Joram M. Posma, Antoine Lain, Mujeen Sung, Jaewoo Kang, Areej Alhassan, Viktor Schlegel, Monira Aloud, Riza Batista-Navarro, Goran Nenadic, Ying-Jia Lin, Zhi-Quan Feng, Hung-Yu Kao, Ian M. Campbell, Graciela Gonzalez-Hernandez
2025 J jnl
KU AIGEN ICL EDI@BC8 Track 3: Advancing Phenotype Named Entity Recognition and Normalization for Dysmorphology Physical Examination Reports.
CoRR
Hajung Kim, Chanhwi Kim, Jiwoong Sohn, Tim Beck, Marek Rei, Sunkyu Kim, T. Ian Simpson, Joram M. Posma, Antoine Lain, Mujeen Sung, Jaewoo Kang
2023 J jnl
Biomedical relation extraction with knowledge base-refined weak supervision.
Database J. Biol. Databases Curation
Wonjin Yoon, Sean S. Yi, Richard Jackson, Hyunjae Kim, Sunkyu Kim, Jaewoo Kang
2023 — conf
Enhancing Clinical Outcome Predictions through Auxiliary Loss and Sentence-Level Self-Attention.
BIBM
Sanghoon Lee, Gwanghoon Jang, Chanhwi Kim, Se-Jeong Park, Kiwoong Yoo, Jihye Kim, Sunkyu Kim, Jaewoo Kang
2023 J jnl
Evaluation of crowdsourced mortality prediction models as a framework for assessing artificial intelligence in medicine.
J. Am. Medical Informatics Assoc.
Timothy Bergquist, Thomas Schaffter, Yao Yan, Thomas Yu, Justin Prosser, Jifan Gao, Guanhua Chen, Lukasz Charzewski, Zofia Nawalany, Ivan Brugere, Renata Retkute, Alidivinas Prusokas, Augustinas Prusokas, Yonghwa Choi, Sanghoon Lee, Junseok Choe, Inggeol Lee, Sunkyu Kim, Jaewoo Kang, Sean D. Mooney, Justin Guinney
2021 J jnl
Predicting mechanism of action of novel compounds using compound structure and transcriptomic signature coembedding.
Bioinform.
Gwanghoon Jang, Sungjoon Park, Sanghoon Lee, Sunkyu Kim, Se-Jeong Park, Jaewoo Kang
2020 J jnl
BioBERT: a pre-trained biomedical language representation model for biomedical text mining.
Bioinform.
Jinhyuk Lee, Wonjin Yoon, Sungdong Kim, Donghyeon Kim, Sunkyu Kim, Chan Ho So, Jaewoo Kang
2020 J jnl
Bipartite Link Prediction by Intra-Class Connection Based Triadic Closure.
IEEE Access
Jungwoon Shin, Mogan Gim, Donghyeon Park, Sunkyu Kim, Jaewoo Kang
2020 J jnl
Building a PubMed knowledge graph.
CoRR
Jian Xu, Sunkyu Kim, Min Song, Minbyul Jeong, Donghyeon Kim, Jaewoo Kang, Justin F. Rousseau, Xin Li, Weijia Xu, Vetle I. Torvik, Yi Bu, Chongyan Chen, Islam Akef Ebeid, Daifeng Li, Ying Ding
2020 J jnl
ChimerDB 4.0: an updated and expanded database of fusion genes.
Nucleic Acids Res.
Ye Eun Jang, Insu Jang, Sunkyu Kim, Subin Cho, Daehan Kim, Keonwoo Kim, Jaewon Kim, Jimin Hwang, Sangok Kim, Jaesang Kim, Jaewoo Kang, Byungwook Lee, Sanghyuk Lee
2020 J jnl
Improved survival analysis by learning shared genomic information from pan-cancer data.
Bioinform.
Sunkyu Kim, Keonwoo Kim, Junseok Choe, Inggeol Lee, Jaewoo Kang
2019 J jnl
BioBERT: a pre-trained biomedical language representation model for biomedical text mining.
CoRR
Jinhyuk Lee, Wonjin Yoon, Sungdong Kim, Donghyeon Kim, Sunkyu Kim, Chan Ho So, Jaewoo Kang
2019 J jnl
ReSimNet: drug response similarity prediction using Siamese neural networks.
Bioinform.
Minji Jeon, Donghyeon Park, Jinhyuk Lee, Hwisang Jeon, Miyoung Ko, Sunkyu Kim, Yonghwa Choi, Aik Choon Tan, Jaewoo Kang
2018 J jnl
Deep learning of mutation-gene-drug relations from the literature.
BMC Bioinform.
Kyubum Lee, Byounggun Kim, Yonghwa Choi, Sunkyu Kim, Won-Ho Shin, Sunwon Lee, Sungjoon Park, Seongsoon Kim, Aik Choon Tan, Jaewoo Kang
2018 J jnl
In silico drug combination discovery for personalized cancer therapy.
BMC Syst. Biol.
Minji Jeon, Sunkyu Kim, Sungjoon Park, Heewon Lee, Jaewoo Kang
2017 J jnl
ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining.
Nucleic Acids Res.
Myunggyo Lee, Kyubum Lee, Namhee Yu, Insu Jang, Ikjung Choi, Pora Kim, Ye Eun Jang, Byounggun Kim, Sunkyu Kim, Byungwook Lee, Jaewoo Kang, Sanghyuk Lee
2016 J jnl
BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations.
Database J. Biol. Databases Curation
Kyubum Lee, Sunwon Lee, Sungjoon Park, Sunkyu Kim, Suhkyung Kim, Kwanghun Choi, Aik Choon Tan, Jaewoo Kang
2016 J jnl
HiPub: translating PubMed and PMC texts to networks for knowledge discovery.
Bioinform.
Kyubum Lee, Won-Ho Shin, Byounggun Kim, Sunwon Lee, Yonghwa Choi, Sunkyu Kim, Minji Jeon, Aik Choon Tan, Jaewoo Kang