Sumio Sugano

24 papers Journal 24
YearRankTypeTitle / Venue / Authors
2018 J jnl
DBTSS/DBKERO for integrated analysis of transcriptional regulation.
Nucleic Acids Res.
Ayako Suzuki, Shin Kawano, Toutai Mituyama, Mikita Suyama, Yae Kanai, Katsuhiko Shirahige, Hiroyuki Sasaki, Katsushi Tokunaga, Katsuya Tsuchihara, Sumio Sugano, Kenta Nakai, Yutaka Suzuki
2015 J jnl
DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data.
Nucleic Acids Res.
Ayako Suzuki, Hiroyuki Wakaguri, Riu Yamashita, Shin Kawano, Katsuya Tsuchihara, Sumio Sugano, Yutaka Suzuki, Kenta Nakai
2012 J jnl
DBTSS: DataBase of Transcriptional Start Sites progress report in 2012.
Nucleic Acids Res.
Riu Yamashita, Sumio Sugano, Yutaka Suzuki, Kenta Nakai
2011 J jnl
Full-parasites: database of full-length cDNAs of apicomplexa parasites, 2010 update.
Nucleic Acids Res.
Josef Tuda, Arthur E. Mongan, Mohammed E. M. Tolba, Mihoko Imada, Junya Yamagishi, Xuenan Xuan, Hiroyuki Wakaguri, Sumio Sugano, Chihiro Sugimoto, Yutaka Suzuki
2010 J jnl
DBTSS provides a tissue specific dynamic view of Transcription Start Sites.
Nucleic Acids Res.
Riu Yamashita, Hiroyuki Wakaguri, Sumio Sugano, Yutaka Suzuki, Kenta Nakai
2010 J jnl
H-DBAS: human-transcriptome database for alternative splicing: update 2010.
Nucleic Acids Res.
Jun-ichi Takeda, Yutaka Suzuki, Ryuichi Sakate, Yoshiharu Sato, Takashi Gojobori, Tadashi Imanishi, Sumio Sugano
2009 J jnl
Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences.
J. Comput. Biol.
Kouichi Kimura, Yutaka Suzuki, Sumio Sugano, Asako Koike
2009 J jnl
Full-Malaria/Parasites and Full-Arthropods: databases of full-length cDNAs of parasites and arthropods, update 2009.
Nucleic Acids Res.
Hiroyuki Wakaguri, Yutaka Suzuki, Toshiaki Katayama, Shuichi Kawashima, Eri Kibukawa, Kazushi Hiranuka, Masahide Sasaki, Sumio Sugano, Junichi Watanabe
2009 J jnl
Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomics.
Nucleic Acids Res.
Yukio Maruyama, Ai Wakamatsu, Yoshifumi Kawamura, Kouichi Kimura, Jun-ichi Yamamoto, Tetsuo Nishikawa, Yasutomo Kisu, Sumio Sugano, Naoki Goshima, Takao Isogai, Nobuo Nomura
2008 J jnl
DBTSS: database of transcription start sites, progress report 2008.
Nucleic Acids Res.
Hiroyuki Wakaguri, Riu Yamashita, Yutaka Suzuki, Sumio Sugano, Kenta Nakai
2008 J jnl
UTGB/medaka: genomic resource database for medaka biology.
Nucleic Acids Res.
Budrul Ahsan, Daisuke Kobayashi, Tomoyuki Yamada, Masahiro Kasahara, Shin Sasaki, Taro L. Saito, Yukinobu Nagayasu, Koichiro Doi, Yoichiro Nakatani, Wei Qu, Tomoko Jindo, Atsuko Shimada, Kiyoshi Naruse, Atsushi Toyoda, Yoko Kuroki, Asao Fujiyama, Takashi Sasaki, Atsushi Shimizu, Shuichi Asakawa, Nobuyoshi Shimizu, Shin-ichi Hashimoto, Jun Yang, Yongjun Lee, Kouji Matsushima, Sumio Sugano, Mitsuru Sakaizumi, Takanori Narita, Kazuko Ohishi, Shinobu Haga, Fumiko Ohta, Hisayo Nomoto, Keiko Nogata, Tomomi Morishita, Tomoko Endo, Tadasu Shin-I, Hiroyuki Takeda, Yuji Kohara, Shinichi Morishita
2007 J jnl
AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction.
BMC Bioinform.
Ayumu Saito, Masao Nagasaki, Masaaki Oyama, Hiroko Kozuka-Hata, Kentaro Semba, Sumio Sugano, Tadashi Yamamoto, Satoru Miyano
2007 J jnl
Comparasite: a database for comparative study of transcriptomes of parasites defined by full-length cDNAs.
Nucleic Acids Res.
Junichi Watanabe, Hiroyuki Wakaguri, Masahide Sasaki, Yutaka Suzuki, Sumio Sugano
2007 J jnl
H-DBAS: Alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational.
Nucleic Acids Res.
Jun-ichi Takeda, Yutaka Suzuki, Mitsuteru Nakao, Tsuyoshi Kuroda, Sumio Sugano, Takashi Gojobori, Tadashi Imanishi
2006 J jnl
DBTSS: DataBase of Human Transcription Start Sites, progress report 2006.
Nucleic Acids Res.
Riu Yamashita, Yutaka Suzuki, Hiroyuki Wakaguri, Katsuki Tsuritani, Kenta Nakai, Sumio Sugano
2005 J jnl
5'SAGE: 5'-end Serial Analysis of Gene Expression database.
Nucleic Acids Res.
Yasuhiro Kasai, Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita
2004 J jnl
BTSS, DataBase of Transcriptional Start Sites: progress report 2004.
Nucleic Acids Res.
Yutaka Suzuki, Riu Yamashita, Sumio Sugano, Kenta Nakai
2004 J jnl
Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species.
Nucleic Acids Res.
Junichi Watanabe, Yutaka Suzuki, Masahide Sasaki, Sumio Sugano
2004 J jnl
Large-scale collection and characterization of promoters of human and mouse genes.
Silico Biol.
Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano
2002 J jnl
DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs.
Nucleic Acids Res.
Yutaka Suzuki, Riu Yamashita, Kenta Nakai, Sumio Sugano
2002 J jnl
Internal ribosome entry site-mediated translation of Smad5 in vivo: requirement for a nuclear event.
Nucleic Acids Res.
Kazuko Shiroki, Chieko Ohsawa, Natuki Sugi, Motoaki Wakiyama, Kin-ichiro Miura, Manabu Watanabe, Yutaka Suzuki, Sumio Sugano
2001 J jnl
Database and analysis system for cDNA clones obtained from full-length enriched cDNA libraries.
Silico Biol.
Tetsuo Nishikawa, Toshio Ota, Yuri Kawai, Shizuko Ishii, Kaoru Saito, Jun-ichi Yamamoto, Ai Wakamatsu, Masashi Ozawa, Yutaka Suzuki, Sumio Sugano, Takao Isogai
2001 J jnl
FULL-malaria: a database for a full-length enriched cDNA library from human malaria parasite, Plasmodium falciparum.
Nucleic Acids Res.
Junichi Watanabe, Masahide Sasaki, Yutaka Suzuki, Sumio Sugano
2001 J jnl
HUNT: launch of a full-length cDNA database from the Helix Research Institute.
Nucleic Acids Res.
Henrik T. Yudate, Makiko Suwa, Ryotaro Irie, Hiroshi Matsui, Tetsuo Nishikawa, Yoshitaka Nakamura, Daisuke Yamaguchi, Zhang Zhi Peng, Tomoyuki Yamamoto, Keiichi Nagai, Koji Hayashi, Tetsuji Otsuki, Tomoyasu Sugiyama, Toshio Ota, Yutaka Suzuki, Sumio Sugano, Takao Isogai, Yasuhiko Masuho